Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009271
CDS Infomation

pacid=37428424 polypeptide=PGSC0003DMP400006429 locus=PGSC0003DMG400003597 ID=PGSC0003DMT400009271.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTCCAATTGTTGAAATCGAAGGAGACATTGACACGGACGATGTCAATCCCTTC
ACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCATTCCGCAGCAGCAACAACAG
CAGCTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAA
GGCCTTTCTTTCCAACTCTGGCCTGCCGCTACCATTCTCGTCACTCTCCTTGACAACATC
CGTAGCGGCGAATCAACTCCATTTTCCGAGTTGTTCAAACGTCAGGAAAAAGGGGATTCA
CTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCT
GCTATTCTTGGTGCTAGGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAG
TTCAATGTTGATGCAAACTCACAAGTTTTGGAACAGCAGAGTGGGGGTGTTGATGTTGCG
GCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATT
TTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAAGACGTTGAGG
TTCTTCCTGTTAGGAGGTGGAAAGAAGATAGCTTTTGTTATGGCTCATTTGAGAAGATGG
AAGAAGGAATCTGTTTTCTTCAAGAGAGCTAAGAAGCTTTTCGATGTCCAAATCATACAT
ACAGAGCCTCCGCCTGATGGGTCTAGAATTGGGGTGGTTGTGTACCTTTTCACAGGGAAA
AGATTGCCTCCAAGAGAGCCACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400006429
PEP Infomation

pacid=37428424 transcript=PGSC0003DMT400009271 locus=PGSC0003DMG400003597 ID=PGSC0003DMT400009271.v4.03 annot-version=v4.03
Sequence

MSSPIVEIEGDIDTDDVNPFTMILPQDGHDNDAIPQQQQQQLHFLQSINSNVVIRQLPSE
GLSFQLWPAATILVTLLDNIRSGESTPFSELFKRQEKGDSLPLRILELGSGTGVVGIAAA
AILGARVTVTDLPHVLPNIQFNVDANSQVLEQQSGGVDVAALSWGDNQHMEAVGRDYDLI
LGSDVVYHDHLYDPLIKTLRFFLLGGGKKIAFVMAHLRRWKKESVFFKRAKKLFDVQIIH
TEPPPDGSRIGVVVYLFTGKRLPPREPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400009271
Transcript Infomation

pacid=37428424 locus=PGSC0003DMG400003597 ID=PGSC0003DMT400009271.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTCCAATTGTTGAAATCGAAGGAGACATTGACACGGACGATGTCAATCCCTTC
ACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCATTCCGCAGCAGCAACAACAG
CAGCTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAA
GGCCTTTCTTTCCAACTCTGGCCTGCCGCTACCATTCTCGTCACTCTCCTTGACAACATC
CGTAGCGGCGAATCAACTCCATTTTCCGAGTTGTTCAAACGTCAGGAAAAAGGGGATTCA
CTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCT
GCTATTCTTGGTGCTAGGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAG
TTCAATGTTGATGCAAACTCACAAGTTTTGGAACAGCAGAGTGGGGGTGTTGATGTTGCG
GCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATT
TTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAAGACGTTGAGG
TTCTTCCTGTTAGGAGGTGGAAAGAAGATAGCTTTTGTTATGGCTCATTTGAGAAGATGG
AAGAAGGAATCTGTTTTCTTCAAGAGAGCTAAGAAGCTTTTCGATGTCCAAATCATACAT
ACAGAGCCTCCGCCTGATGGGTCTAGAATTGGGGTGGTTGTGTACCTTTTCACAGGGAAA
AGATTGCCTCCAAGAGAGCCACTATAG