Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009233
CDS Infomation

pacid=37424712 polypeptide=PGSC0003DMP400006400 locus=PGSC0003DMG400003585 ID=PGSC0003DMT400009233.v4.03 annot-version=v4.03
Sequence

ATGCAACACGGCGACCCTAGCTCTACCTATTACCAACATTACCAGCCTCCCTTTCAAAAC
CCTAACCCTAGCTCTACTCCTGCCGATCAACCTTACAATCCGGCTCCCCTCCCTAGCCAA
TACGCCTCTGCCCCGCCGGTTGCTTCCGGCGATTACTCCAATTACACATCCACTTATCCG
CCTTATTCTCAGCCCTCTGCCGATCATGCCCATAAACCACCTGCACCGTTCCCTTCAAAC
CCCAGCTCTCAATCGTCCTACGGTTTCCCCCACCTTGAGGCTCCGCAGCCCAACTATTAC
CCTTATGATCAAAACCAAGCACCTGTGAGTTATGATTATGCTGCCCCTGGCGCTAATTAC
CACACACTAAATCAACCTAATTATAATTCAGTGAATTCATCTGCTCCTTATTCATCAACG
CCATTTGGTGTCTCCGCAGGGACTAGTCATGGTAATTCGTTTGAGAATAACTCGGATTAT
GGTTCATATGGAGACCAAGGGTTGTATGAGAGTGGTGTTTACAAGTATAATGGAAAAAAA
GAGGAGTCATATAGTGGAAATCAATCACAATCAAGTGCGGGTTTGATGTTTGATGATTAT
GGAAGACCTATCAATGTTCATAGTGGGAGTGGGAGAGAGCAGCAGCAGCGACCTGTGAAT
ACTCCTAAAGTTGTGAAAGCAGCACCTAAGGTTGAGGACCAACAAGATGCCACAGGTGGT
GTTCTGAAGTTTCGGGTCAAGCTTTTATCAGAAGGCATTGGTCAGAGTGACATGGATGTG
CTCTGTCAGATTGGTCTAGATGGGATTCGCATACTTGAGCCTGCGACTAGCAGAACCCTG
AGGATATATTCACTCGAGAATGTGACAAAACTGGAGGTATTGGATTCATATATATTTGCA
TTTTGGGCTAAAACTTCTGTCGACAATGAAGCTAAACGTATCAGGCTGAGATCAAATAGC
TATACCACAAATAATATTCTTGATGCAGTGACAGCAGCAAGTATTCAGGTCAAAGAGATG
GGCGAGAGTAATATGCCTTCAGATGCAATTACGGGATCTGAGTCAGCTGCTGAGAAGAAG
AAAGGTTTTGATTGGATGAAGTTGATGAGGCCACTAAATGAAGAGAAAGATCACTGGGTT
CCCGATGAAGCAATTCGAAAGTGCACTGCTTGTGGGACAAATTTTAGTGCTTTTGTACGA
AGGCACCACTGCAGAAATTGTGGGGATATTTTCTGTGACAAATGTACTCAAGGTAGAACT
GCTTTGACTGCAGATGAAGATGCTCAACCAGTTCGAGTTTGTGACCGATGCATGGCTGAG
GTAACTCAAAGGCTCAGCAATGCTAAAGCAGCGGTCAGAGTTGCTGCAATGCCGAGTCAT
GTGGACCTTGCAAAAAAACTCCAGGAGGAGTTGGACAAAAAGCGGAAGACATCAACAGGT
CATACATCCCAAGGATCCAGGAGGATGAGAGAGGTTGCATGCCCAACTTGCACAGTCCAT
TTGCAGGTTGAAGTCCCGGCTTCTGGATCAGAAACGATTGAGTGCAGTGTCTGCCAGCAC
CCATTCCTTGTTAGTGCTCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006400
PEP Infomation

pacid=37424712 transcript=PGSC0003DMT400009233 locus=PGSC0003DMG400003585 ID=PGSC0003DMT400009233.v4.03 annot-version=v4.03
Sequence

MQHGDPSSTYYQHYQPPFQNPNPSSTPADQPYNPAPLPSQYASAPPVASGDYSNYTSTYP
PYSQPSADHAHKPPAPFPSNPSSQSSYGFPHLEAPQPNYYPYDQNQAPVSYDYAAPGANY
HTLNQPNYNSVNSSAPYSSTPFGVSAGTSHGNSFENNSDYGSYGDQGLYESGVYKYNGKK
EESYSGNQSQSSAGLMFDDYGRPINVHSGSGREQQQRPVNTPKVVKAAPKVEDQQDATGG
VLKFRVKLLSEGIGQSDMDVLCQIGLDGIRILEPATSRTLRIYSLENVTKLEVLDSYIFA
FWAKTSVDNEAKRIRLRSNSYTTNNILDAVTAASIQVKEMGESNMPSDAITGSESAAEKK
KGFDWMKLMRPLNEEKDHWVPDEAIRKCTACGTNFSAFVRRHHCRNCGDIFCDKCTQGRT
ALTADEDAQPVRVCDRCMAEVTQRLSNAKAAVRVAAMPSHVDLAKKLQEELDKKRKTSTG
HTSQGSRRMREVACPTCTVHLQVEVPASGSETIECSVCQHPFLVSAH*

Transcript Sequence

Transcript ID

PGSC0003DMT400009233
Transcript Infomation

pacid=37424712 locus=PGSC0003DMG400003585 ID=PGSC0003DMT400009233.v4.03 annot-version=v4.03
Sequence

ATGCAACACGGCGACCCTAGCTCTACCTATTACCAACATTACCAGCCTCCCTTTCAAAAC
CCTAACCCTAGCTCTACTCCTGCCGATCAACCTTACAATCCGGCTCCCCTCCCTAGCCAA
TACGCCTCTGCCCCGCCGGTTGCTTCCGGCGATTACTCCAATTACACATCCACTTATCCG
CCTTATTCTCAGCCCTCTGCCGATCATGCCCATAAACCACCTGCACCGTTCCCTTCAAAC
CCCAGCTCTCAATCGTCCTACGGTTTCCCCCACCTTGAGGCTCCGCAGCCCAACTATTAC
CCTTATGATCAAAACCAAGCACCTGTGAGTTATGATTATGCTGCCCCTGGCGCTAATTAC
CACACACTAAATCAACCTAATTATAATTCAGTGAATTCATCTGCTCCTTATTCATCAACG
CCATTTGGTGTCTCCGCAGGGACTAGTCATGGTAATTCGTTTGAGAATAACTCGGATTAT
GGTTCATATGGAGACCAAGGGTTGTATGAGAGTGGTGTTTACAAGTATAATGGAAAAAAA
GAGGAGTCATATAGTGGAAATCAATCACAATCAAGTGCGGGTTTGATGTTTGATGATTAT
GGAAGACCTATCAATGTTCATAGTGGGAGTGGGAGAGAGCAGCAGCAGCGACCTGTGAAT
ACTCCTAAAGTTGTGAAAGCAGCACCTAAGGTTGAGGACCAACAAGATGCCACAGGTGGT
GTTCTGAAGTTTCGGGTCAAGCTTTTATCAGAAGGCATTGGTCAGAGTGACATGGATGTG
CTCTGTCAGATTGGTCTAGATGGGATTCGCATACTTGAGCCTGCGACTAGCAGAACCCTG
AGGATATATTCACTCGAGAATGTGACAAAACTGGAGGTATTGGATTCATATATATTTGCA
TTTTGGGCTAAAACTTCTGTCGACAATGAAGCTAAACGTATCAGGCTGAGATCAAATAGC
TATACCACAAATAATATTCTTGATGCAGTGACAGCAGCAAGTATTCAGGTCAAAGAGATG
GGCGAGAGTAATATGCCTTCAGATGCAATTACGGGATCTGAGTCAGCTGCTGAGAAGAAG
AAAGGTTTTGATTGGATGAAGTTGATGAGGCCACTAAATGAAGAGAAAGATCACTGGGTT
CCCGATGAAGCAATTCGAAAGTGCACTGCTTGTGGGACAAATTTTAGTGCTTTTGTACGA
AGGCACCACTGCAGAAATTGTGGGGATATTTTCTGTGACAAATGTACTCAAGGTAGAACT
GCTTTGACTGCAGATGAAGATGCTCAACCAGTTCGAGTTTGTGACCGATGCATGGCTGAG
GTAACTCAAAGGCTCAGCAATGCTAAAGCAGCGGTCAGAGTTGCTGCAATGCCGAGTCAT
GTGGACCTTGCAAAAAAACTCCAGGAGGAGTTGGACAAAAAGCGGAAGACATCAACAGGT
CATACATCCCAAGGATCCAGGAGGATGAGAGAGGTTGCATGCCCAACTTGCACAGTCCAT
TTGCAGGTTGAAGTCCCGGCTTCTGGATCAGAAACGATTGAGTGCAGTGTCTGCCAGCAC
CCATTCCTTGTTAGTGCTCATTGA