Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009226
CDS Infomation

pacid=37424529 polypeptide=PGSC0003DMP400006395 locus=PGSC0003DMG400003582 ID=PGSC0003DMT400009226.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGTCTTTCTGCCCAAAACAGGCTTTATCTTTCACCAATTCGGCCCACCAATCC
AGAGCAATTCCACGTGACATCCACGTGCGTTTCCCTGCTTCTGTCTCTTCACCTTCTTCC
AGGTGTGGGCTGAAGTTGAAAGCCACCACACGATTGAAGGTATTGGCAACTTATGCGACG
AAGGTGATGGATCAGTCGTCCAGTAAAGCGAGTTCACAGGCTCCTACAGTTGTTGAAGTG
GATCTGGGGAATCGGAGCTACCCGATTTATATTGGGGCTGGACTTCTTGATCAACCTGAC
CTCCTACAAAGGCATATTCATGGGAAGAGAGTCCTTGTAGTTACTAACACTACAGTTGCC
CCTCTATATCTTGATAAAACTATAAGCACTTTGACAGATGGAAACCCTAATGTTACCGTA
GAAAGTGTCATTTTGCCAGATGGTGAGCAATTTAAAAACATGGAAACTCTTATGAAAGTC
TTTGATAAAGCCATTGAATCAAGGCTGGATCGTCGTTGTACATTTGTCGCTCTTGGTGGT
GGAGTTATAGGTGACATGTGTGGATATGCCGCCGCTTCCTACCTTCGTGGAGTTAATTTT
ATTCAGATCCCTACCACTGTTATGGCACAGGTAGATTCTTCAGTTGGAGGCAAAACTGGA
ATAAACCATCCACTTGGTAAAAATATGATTGGAGCATTCTACCAGCCACAATGTGTGCTT
ATAGACACGGATACCCTGAATACTTTACCAGATAGAGAATTAGCATCTGGCCTCGCAGAG
GTGATAAAATATGGACTCATTAGAGATGCTGAGTTTTTCGAGTGGCAAGAACAGAATATG
CCATTATTATTAGCAAGGGACCCCACTGCATTTACCTATGCTATTAAGCGTTCCTGTGAA
AACAAAGCAGAGGTTGTTTCTCAAGATGAGAAGGAAAGCGGAGTGAGGGCAACTTTGAAC
TTGGGTCATACCTTTGGTCATGCAGTTGAGACTGGCGTTGGCTATGGACAGTGGCTTCAT
GGAGAAGCAGTTGCTGCTGGCACGGTCATGGCTGTTGACATGTCACGTCGGCTTGGTTGG
ATTGATGACTCACTGGTACAGCGGGTGCAGAAGATCTTAGAACAGGCAAAGCTGCCAACT
TCACCTCCAGAAATTATGACTGTGGAGATGTTCAAGTCTATCATGGCTGTTGATAAAAAA
GTGGCAGATGGCAAGCTAAGACTTATCCTTCTAAATGGTTCACTTGGTAACTGTGTCTTT
ACCGGTGATTATGACCAGAAGGCCCTCGATGAAACACTACGTGCATTTTCCAAATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006395
PEP Infomation

pacid=37424529 transcript=PGSC0003DMT400009226 locus=PGSC0003DMG400003582 ID=PGSC0003DMT400009226.v4.03 annot-version=v4.03
Sequence

MASSFCPKQALSFTNSAHQSRAIPRDIHVRFPASVSSPSSRCGLKLKATTRLKVLATYAT
KVMDQSSSKASSQAPTVVEVDLGNRSYPIYIGAGLLDQPDLLQRHIHGKRVLVVTNTTVA
PLYLDKTISTLTDGNPNVTVESVILPDGEQFKNMETLMKVFDKAIESRLDRRCTFVALGG
GVIGDMCGYAAASYLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNMIGAFYQPQCVL
IDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEQNMPLLLARDPTAFTYAIKRSCE
NKAEVVSQDEKESGVRATLNLGHTFGHAVETGVGYGQWLHGEAVAAGTVMAVDMSRRLGW
IDDSLVQRVQKILEQAKLPTSPPEIMTVEMFKSIMAVDKKVADGKLRLILLNGSLGNCVF
TGDYDQKALDETLRAFSKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400009226
Transcript Infomation

pacid=37424529 locus=PGSC0003DMG400003582 ID=PGSC0003DMT400009226.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGTCTTTCTGCCCAAAACAGGCTTTATCTTTCACCAATTCGGCCCACCAATCC
AGAGCAATTCCACGTGACATCCACGTGCGTTTCCCTGCTTCTGTCTCTTCACCTTCTTCC
AGGTGTGGGCTGAAGTTGAAAGCCACCACACGATTGAAGGTATTGGCAACTTATGCGACG
AAGGTGATGGATCAGTCGTCCAGTAAAGCGAGTTCACAGGCTCCTACAGTTGTTGAAGTG
GATCTGGGGAATCGGAGCTACCCGATTTATATTGGGGCTGGACTTCTTGATCAACCTGAC
CTCCTACAAAGGCATATTCATGGGAAGAGAGTCCTTGTAGTTACTAACACTACAGTTGCC
CCTCTATATCTTGATAAAACTATAAGCACTTTGACAGATGGAAACCCTAATGTTACCGTA
GAAAGTGTCATTTTGCCAGATGGTGAGCAATTTAAAAACATGGAAACTCTTATGAAAGTC
TTTGATAAAGCCATTGAATCAAGGCTGGATCGTCGTTGTACATTTGTCGCTCTTGGTGGT
GGAGTTATAGGTGACATGTGTGGATATGCCGCCGCTTCCTACCTTCGTGGAGTTAATTTT
ATTCAGATCCCTACCACTGTTATGGCACAGGTAGATTCTTCAGTTGGAGGCAAAACTGGA
ATAAACCATCCACTTGGTAAAAATATGATTGGAGCATTCTACCAGCCACAATGTGTGCTT
ATAGACACGGATACCCTGAATACTTTACCAGATAGAGAATTAGCATCTGGCCTCGCAGAG
GTGATAAAATATGGACTCATTAGAGATGCTGAGTTTTTCGAGTGGCAAGAACAGAATATG
CCATTATTATTAGCAAGGGACCCCACTGCATTTACCTATGCTATTAAGCGTTCCTGTGAA
AACAAAGCAGAGGTTGTTTCTCAAGATGAGAAGGAAAGCGGAGTGAGGGCAACTTTGAAC
TTGGGTCATACCTTTGGTCATGCAGTTGAGACTGGCGTTGGCTATGGACAGTGGCTTCAT
GGAGAAGCAGTTGCTGCTGGCACGGTCATGGCTGTTGACATGTCACGTCGGCTTGGTTGG
ATTGATGACTCACTGGTACAGCGGGTGCAGAAGATCTTAGAACAGGCAAAGCTGCCAACT
TCACCTCCAGAAATTATGACTGTGGAGATGTTCAAGTCTATCATGGCTGTTGATAAAAAA
GTGGCAGATGGCAAGCTAAGACTTATCCTTCTAAATGGTTCACTTGGTAACTGTGTCTTT
ACCGGTGATTATGACCAGAAGGCCCTCGATGAAACACTACGTGCATTTTCCAAATCTTAA