Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009220
CDS Infomation

pacid=37428510 polypeptide=PGSC0003DMP400006389 locus=PGSC0003DMG400003578 ID=PGSC0003DMT400009220.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGGTAGATGAGAGGGCTATCAAGACTCTTGTAATATTGATCTCAGCATCAATA
TGCATCCTAATCATTGGATGTGTCTGCATCTTCGTACTAACAGATGGAGTGTCAAAGGAA
ATGAAACTTAGAGCAGAACTGATAAGCCAGTTAGATGCAAGAAGGAAAGCAGAGGCATCG
AGCAATTACAAAAGCCAATTTCTAGCGAACATGAGTCATGAATTACGAACACCTATGGCT
GCAGTTATTGGCTTGCTGGACATTCTTATAAGTGATGGTTTTCTTACAAATGAACAGTAT
GCAACTATTACTCAGATTCGTAAATGCTCAACTGCCTTGCTTCGGCTTCTAAACAACATT
TTGGATCTCAGCAAGGTAGAATCTGGAAAACTGGTGTTGGAAGAAACAGAATTTGACTTG
GCTCGAGAACTTGAAGGACTTGTTGATATGTTCTCTGTCCAGTGCATTAATCACAATGTT
GAGACCGTTCTAGATCTCTCTGATGATATGCCAAAATTAGTTAAAGGAGACTCTGCCAGA
GTTGTTCAAATTTTCGCAAATCTAATTAGCAATTCCCTCAAGTTCACAACCTCGGGCTAC
ATCATTCTTCGTGGATGGTGTGGGAGTGCTCGTGGAGGTAACTTTCCACTGAATCAGAAA
GACTCTTGGTCTGCTCCTAAAGTGAAGTTGAAGCGACAAGAAAGCCAGGGCAAAAGATTC
TCCAAGAAAGATAACAAAATGATCCTGTGGTTTGAAGTTGAGGACTCTGGTTGTGGAATT
GATCCAAGTAAATGGGAATCTGTATTTGAAAGTTTTGAGCAAGCCGATCCTTCGACCACT
CGCTTGCATGGTGGGACTGGCCTTGGACTATGCATTGTACGTACCCTGGTTAACAAAATG
GGTGGAGAGATTAAAGTTGTAAAGAAAAATGGACCAGGGACAGTGATGCAACTATGCCTT
CAACTAAACTGTCCTGCTGAAGTCGCTGGGCAGCACTGCCAGTTTAGTTTTGAGGAACAT
AAAATGAGGGTGTTGCTTGCACTCAATGGAAAAATGGGTAGAGTGATAATGTCCCAATGG
TTAAAGAGAAATGGGGTGCACACTTGGGGAGCATCTGACTGGAATGAGCTCACTCAAATT
CTTCAGGGTATTACTATATCCAAAGGCCATTTGCAAGACACACCTTGTGAATGCTTAGAT
CCTGAAGATTTGAGCATTCAAGATCCTAATGCCTCATCACCTTTTGTCATAGTTGTTGAC
ATTGGCATCCTTGACTTGAGCACAAGTATATGGAAGGAGCAGCTAAATTTTCTTGATAAA
TACCATGGCAGAGCAAAGTTTGCATGGATTCTTTACCATGATACATCGAGTACCATCAAG
ATGGAACTCCGAAGAAGGAGACACCTACTTATGGTCAATAGACCACTATATAAGGGGAAA
ATGATTCAGATTTTAGAAGCTATTATAAAAGAAAAAACTCTTGAGCTGCAGTCTTTTGGT
AATGCACCAGTTGAAGGAGATTCACATGAATGCCTTGAAATTGATCCTAACCACTCGGAT
ATCGCCTGCTCGGATGATTCTGACAAGTCAGATAATGGAAATAACAAATGTGCAAGTGCA
TTCCTTTCTGAAAAAAAGAGGGACGAAAATTTTGTCAAAGCCTCTCTTTCACATTATGGG
ACCTTAAACAACTACTTCATTGACTTCAATAGCGTAGATGTTGAAGAAAATGCTCCTGAC
AGGACTCATCTGGGACAAACTAGGGATGGAGAACATAATTTAACAAGCACCGCCACCAAA
GAGGTCACAAATGCCTGCTCAAATAAGGTAGCAGGGCAGAAATCTCTAGCAGGTTTATGT
ATACTGCTTGCTGAGGATACCCCAGTTCTGCAAAGAGTCGCTACAATAATGCTGGAAAAA
TTGGGAGCTAAAGTGGTTGTTGTAGGAGATGGACTACAGGCAGTGGAAGCACTGAAACCC
GTGCTTAATTCAGATGAATGTAGAAATGAATCTCTTCAGGAAGATGATAATACAATTACT
TCCCAAGCTGAAGGCTCTTATGACTTGATCCTCATGGATTGTCAAATGCCGAAGATGGAT
GGTTATGAAGCAACAAAGGCAATTAGAAGATCAGAAATGGGAACAGGAACACACATTCCC
ATTGTTGCACTGACAGCTCATGCAATGTCATCAGATGAAGCAAAATGCTTACAGGTTGGT
ATGGATGCTTATTTAACCAAGCCCATAGACAGCAAGTTGATGGTTTCCACCATTCTTTCC
TTGACTAAAAGAAAAGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006389
PEP Infomation

pacid=37428510 transcript=PGSC0003DMT400009220 locus=PGSC0003DMG400003578 ID=PGSC0003DMT400009220.v4.03 annot-version=v4.03
Sequence

MGKVDERAIKTLVILISASICILIIGCVCIFVLTDGVSKEMKLRAELISQLDARRKAEAS
SNYKSQFLANMSHELRTPMAAVIGLLDILISDGFLTNEQYATITQIRKCSTALLRLLNNI
LDLSKVESGKLVLEETEFDLARELEGLVDMFSVQCINHNVETVLDLSDDMPKLVKGDSAR
VVQIFANLISNSLKFTTSGYIILRGWCGSARGGNFPLNQKDSWSAPKVKLKRQESQGKRF
SKKDNKMILWFEVEDSGCGIDPSKWESVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKM
GGEIKVVKKNGPGTVMQLCLQLNCPAEVAGQHCQFSFEEHKMRVLLALNGKMGRVIMSQW
LKRNGVHTWGASDWNELTQILQGITISKGHLQDTPCECLDPEDLSIQDPNASSPFVIVVD
IGILDLSTSIWKEQLNFLDKYHGRAKFAWILYHDTSSTIKMELRRRRHLLMVNRPLYKGK
MIQILEAIIKEKTLELQSFGNAPVEGDSHECLEIDPNHSDIACSDDSDKSDNGNNKCASA
FLSEKKRDENFVKASLSHYGTLNNYFIDFNSVDVEENAPDRTHLGQTRDGEHNLTSTATK
EVTNACSNKVAGQKSLAGLCILLAEDTPVLQRVATIMLEKLGAKVVVVGDGLQAVEALKP
VLNSDECRNESLQEDDNTITSQAEGSYDLILMDCQMPKMDGYEATKAIRRSEMGTGTHIP
IVALTAHAMSSDEAKCLQVGMDAYLTKPIDSKLMVSTILSLTKRKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400009220
Transcript Infomation

pacid=37428510 locus=PGSC0003DMG400003578 ID=PGSC0003DMT400009220.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGGTAGATGAGAGGGCTATCAAGACTCTTGTAATATTGATCTCAGCATCAATA
TGCATCCTAATCATTGGATGTGTCTGCATCTTCGTACTAACAGATGGAGTGTCAAAGGAA
ATGAAACTTAGAGCAGAACTGATAAGCCAGTTAGATGCAAGAAGGAAAGCAGAGGCATCG
AGCAATTACAAAAGCCAATTTCTAGCGAACATGAGTCATGAATTACGAACACCTATGGCT
GCAGTTATTGGCTTGCTGGACATTCTTATAAGTGATGGTTTTCTTACAAATGAACAGTAT
GCAACTATTACTCAGATTCGTAAATGCTCAACTGCCTTGCTTCGGCTTCTAAACAACATT
TTGGATCTCAGCAAGGTAGAATCTGGAAAACTGGTGTTGGAAGAAACAGAATTTGACTTG
GCTCGAGAACTTGAAGGACTTGTTGATATGTTCTCTGTCCAGTGCATTAATCACAATGTT
GAGACCGTTCTAGATCTCTCTGATGATATGCCAAAATTAGTTAAAGGAGACTCTGCCAGA
GTTGTTCAAATTTTCGCAAATCTAATTAGCAATTCCCTCAAGTTCACAACCTCGGGCTAC
ATCATTCTTCGTGGATGGTGTGGGAGTGCTCGTGGAGGTAACTTTCCACTGAATCAGAAA
GACTCTTGGTCTGCTCCTAAAGTGAAGTTGAAGCGACAAGAAAGCCAGGGCAAAAGATTC
TCCAAGAAAGATAACAAAATGATCCTGTGGTTTGAAGTTGAGGACTCTGGTTGTGGAATT
GATCCAAGTAAATGGGAATCTGTATTTGAAAGTTTTGAGCAAGCCGATCCTTCGACCACT
CGCTTGCATGGTGGGACTGGCCTTGGACTATGCATTGTACGTACCCTGGTTAACAAAATG
GGTGGAGAGATTAAAGTTGTAAAGAAAAATGGACCAGGGACAGTGATGCAACTATGCCTT
CAACTAAACTGTCCTGCTGAAGTCGCTGGGCAGCACTGCCAGTTTAGTTTTGAGGAACAT
AAAATGAGGGTGTTGCTTGCACTCAATGGAAAAATGGGTAGAGTGATAATGTCCCAATGG
TTAAAGAGAAATGGGGTGCACACTTGGGGAGCATCTGACTGGAATGAGCTCACTCAAATT
CTTCAGGGTATTACTATATCCAAAGGCCATTTGCAAGACACACCTTGTGAATGCTTAGAT
CCTGAAGATTTGAGCATTCAAGATCCTAATGCCTCATCACCTTTTGTCATAGTTGTTGAC
ATTGGCATCCTTGACTTGAGCACAAGTATATGGAAGGAGCAGCTAAATTTTCTTGATAAA
TACCATGGCAGAGCAAAGTTTGCATGGATTCTTTACCATGATACATCGAGTACCATCAAG
ATGGAACTCCGAAGAAGGAGACACCTACTTATGGTCAATAGACCACTATATAAGGGGAAA
ATGATTCAGATTTTAGAAGCTATTATAAAAGAAAAAACTCTTGAGCTGCAGTCTTTTGGT
AATGCACCAGTTGAAGGAGATTCACATGAATGCCTTGAAATTGATCCTAACCACTCGGAT
ATCGCCTGCTCGGATGATTCTGACAAGTCAGATAATGGAAATAACAAATGTGCAAGTGCA
TTCCTTTCTGAAAAAAAGAGGGACGAAAATTTTGTCAAAGCCTCTCTTTCACATTATGGG
ACCTTAAACAACTACTTCATTGACTTCAATAGCGTAGATGTTGAAGAAAATGCTCCTGAC
AGGACTCATCTGGGACAAACTAGGGATGGAGAACATAATTTAACAAGCACCGCCACCAAA
GAGGTCACAAATGCCTGCTCAAATAAGGTAGCAGGGCAGAAATCTCTAGCAGGTTTATGT
ATACTGCTTGCTGAGGATACCCCAGTTCTGCAAAGAGTCGCTACAATAATGCTGGAAAAA
TTGGGAGCTAAAGTGGTTGTTGTAGGAGATGGACTACAGGCAGTGGAAGCACTGAAACCC
GTGCTTAATTCAGATGAATGTAGAAATGAATCTCTTCAGGAAGATGATAATACAATTACT
TCCCAAGCTGAAGGCTCTTATGACTTGATCCTCATGGATTGTCAAATGCCGAAGATGGAT
GGTTATGAAGCAACAAAGGCAATTAGAAGATCAGAAATGGGAACAGGAACACACATTCCC
ATTGTTGCACTGACAGCTCATGCAATGTCATCAGATGAAGCAAAATGCTTACAGGTTGGT
ATGGATGCTTATTTAACCAAGCCCATAGACAGCAAGTTGATGGTTTCCACCATTCTTTCC
TTGACTAAAAGAAAAGCCTAA