Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009217
CDS Infomation

pacid=37426748 polypeptide=PGSC0003DMP400006386 locus=PGSC0003DMG400003577 ID=PGSC0003DMT400009217.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTAAGAACCCTAATCTCCAAAAAGCCCCATTGTACCCACGTGTCATTCACAAT
GATCCAGATCTCCAATCAACCTCTTCTTCTCGTCCCAATTTGTATCCAACCCTAAACGAA
ACTGACCTCGCCGAGAATCTCATCCCTGAAAATTACCATATTATCCCTTCTGCTCCATCT
CCCCCTCCCGAGTCCCACGAGGAAACCCTTGTCGTTATATCCGGTGTCCTTATCCATTTG
ATCGATAAAAATTACTCTGTTGAGCTAGCTAACGGAGATTTGTCTCTGTTTCGTCTCCTG
CAAAATAAGAATACGGTTGCTATCCTTGCTAATGTGGGAGACGATATCCAATGGCCGATA
ACTAAGGACCTGACTGCGGTGAAATTGGATGATTCACATTATTTCTTCTCATTTCAAGCT
CTGAAAGAGGATGAATCGGATTGCAGTACTGATGACGACAAAGAAAAGGGTAAAAAAAAG
AAGAAGAAAAAGAAAGAGAAAGATAAGGGACCGATGGATGATTCGTTGAATTATGGTTTG
ACGATTGCTTCAAAGGGTCAGGAGGCATTGTTGAAGGAGCTGGATGATATTTTGAAAAGT
TACAGCACCTTTTCTGTTCAGAAAGTGGAGGAAAATGCGGCATTGGCAATGGGAGGAACA
GTGGCAAGGGAGTTATCTCCAGATGACTTGAAATCGGAGAAGAAGAAGGAGGTGTTAGAA
GAGCGATGCGCCCAATATTGGACCACGCTAGCACCCAATGTGGAGGAGTATAGTGGAGCA
GCTGCAAAATTAGTTGCTCAAGGATCAGGGCAGCTGATTAAAGGGATTTTGTGGTGTGGA
GATGTGTCAGCAGAACGATTGATGCGCGGAAATGAGGTTTTAAAGCAAAGGATGGCTACA
GGGACGAAGGCCGAGATTAGTCCTGAGACACTGAAGAGGATCCAAAGGGTTAAAACAGTA
ACAAAGATGACTGAGAAAGTAGCTTTAGGAGTCCTTTCGGGAGTTCTCTCGGTTTCAGGA
TTCTTCACTAGTTCAGTTGTAAATTCCGTAGCTGGAAAAAAGTTCTTCAAGATGCTGCCA
GGAGAGATGGTCCTTGCTACTCTGGATGGATTTTGCAAAATATGTGATGCTGTTGAAGTA
GCTGGAAAGAATGTGATGTCAACATCATCCACCGTGACAACTGAACTTGTTTCACAGAAG
TATGGAGAAGAGGCAGCCAAAGTGGCAAGCGAAGGGCTTGATGCAGCAGGGCATGCAGTT
GGGACTGCCTGGACTGTGTTTAAGATCAGAAAGGCTCTTAACCCCAAAAGTTCCTTTAAT
CGCGCCACCCAACTTAAGTCTAGTGCTCAAGCTGCTACTATGAAGAAGGCCAAGAGCACA
AAGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006386
PEP Infomation

pacid=37426748 transcript=PGSC0003DMT400009217 locus=PGSC0003DMG400003577 ID=PGSC0003DMT400009217.v4.03 annot-version=v4.03
Sequence

MASKNPNLQKAPLYPRVIHNDPDLQSTSSSRPNLYPTLNETDLAENLIPENYHIIPSAPS
PPPESHEETLVVISGVLIHLIDKNYSVELANGDLSLFRLLQNKNTVAILANVGDDIQWPI
TKDLTAVKLDDSHYFFSFQALKEDESDCSTDDDKEKGKKKKKKKKEKDKGPMDDSLNYGL
TIASKGQEALLKELDDILKSYSTFSVQKVEENAALAMGGTVARELSPDDLKSEKKKEVLE
ERCAQYWTTLAPNVEEYSGAAAKLVAQGSGQLIKGILWCGDVSAERLMRGNEVLKQRMAT
GTKAEISPETLKRIQRVKTVTKMTEKVALGVLSGVLSVSGFFTSSVVNSVAGKKFFKMLP
GEMVLATLDGFCKICDAVEVAGKNVMSTSSTVTTELVSQKYGEEAAKVASEGLDAAGHAV
GTAWTVFKIRKALNPKSSFNRATQLKSSAQAATMKKAKSTKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400009217
Transcript Infomation

pacid=37426748 locus=PGSC0003DMG400003577 ID=PGSC0003DMT400009217.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTAAGAACCCTAATCTCCAAAAAGCCCCATTGTACCCACGTGTCATTCACAAT
GATCCAGATCTCCAATCAACCTCTTCTTCTCGTCCCAATTTGTATCCAACCCTAAACGAA
ACTGACCTCGCCGAGAATCTCATCCCTGAAAATTACCATATTATCCCTTCTGCTCCATCT
CCCCCTCCCGAGTCCCACGAGGAAACCCTTGTCGTTATATCCGGTGTCCTTATCCATTTG
ATCGATAAAAATTACTCTGTTGAGCTAGCTAACGGAGATTTGTCTCTGTTTCGTCTCCTG
CAAAATAAGAATACGGTTGCTATCCTTGCTAATGTGGGAGACGATATCCAATGGCCGATA
ACTAAGGACCTGACTGCGGTGAAATTGGATGATTCACATTATTTCTTCTCATTTCAAGCT
CTGAAAGAGGATGAATCGGATTGCAGTACTGATGACGACAAAGAAAAGGGTAAAAAAAAG
AAGAAGAAAAAGAAAGAGAAAGATAAGGGACCGATGGATGATTCGTTGAATTATGGTTTG
ACGATTGCTTCAAAGGGTCAGGAGGCATTGTTGAAGGAGCTGGATGATATTTTGAAAAGT
TACAGCACCTTTTCTGTTCAGAAAGTGGAGGAAAATGCGGCATTGGCAATGGGAGGAACA
GTGGCAAGGGAGTTATCTCCAGATGACTTGAAATCGGAGAAGAAGAAGGAGGTGTTAGAA
GAGCGATGCGCCCAATATTGGACCACGCTAGCACCCAATGTGGAGGAGTATAGTGGAGCA
GCTGCAAAATTAGTTGCTCAAGGATCAGGGCAGCTGATTAAAGGGATTTTGTGGTGTGGA
GATGTGTCAGCAGAACGATTGATGCGCGGAAATGAGGTTTTAAAGCAAAGGATGGCTACA
GGGACGAAGGCCGAGATTAGTCCTGAGACACTGAAGAGGATCCAAAGGGTTAAAACAGTA
ACAAAGATGACTGAGAAAGTAGCTTTAGGAGTCCTTTCGGGAGTTCTCTCGGTTTCAGGA
TTCTTCACTAGTTCAGTTGTAAATTCCGTAGCTGGAAAAAAGTTCTTCAAGATGCTGCCA
GGAGAGATGGTCCTTGCTACTCTGGATGGATTTTGCAAAATATGTGATGCTGTTGAAGTA
GCTGGAAAGAATGTGATGTCAACATCATCCACCGTGACAACTGAACTTGTTTCACAGAAG
TATGGAGAAGAGGCAGCCAAAGTGGCAAGCGAAGGGCTTGATGCAGCAGGGCATGCAGTT
GGGACTGCCTGGACTGTGTTTAAGATCAGAAAGGCTCTTAACCCCAAAAGTTCCTTTAAT
CGCGCCACCCAACTTAAGTCTAGTGCTCAAGCTGCTACTATGAAGAAGGCCAAGAGCACA
AAGAACTGA