Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009190
CDS Infomation

pacid=37427648 polypeptide=PGSC0003DMP400006366 locus=PGSC0003DMG400003566 ID=PGSC0003DMT400009190.v4.03 annot-version=v4.03
Sequence

ATGGCGGACCTAGTGAAGCAGATCTTGACAAAGCCGATCCAGTTAGCAGACCAGGTGATA
AAGGCAGCCGATGAGGCAAGTTCCTTCAAGCAAGAATGTACTGATCTCAGGTCTAAAACT
GAGAAACTTGTGGCTCTTCTCCGTCAGGCTGCACGCGCCGGCAACGACCTTTATGAACGG
CCCACGCGTCGGATCATTGACGATACTGAACAAGTTCTTGAAAAAGCTTCGGCGCTTGTG
CTAAAGTGCAGAGCCCATGGACTTGTAAAGCGAGTTTTTACCATCATCCCTGCTGCGCAA
TTCCGTAAAATGTCTTCTCAGTTGGAAAACTCCATTGGTGACGTGTCTTGGCTTCTCCGT
GTTTCGGCTTCAGCTGATGAACGAGCTGATGACTGTTTGGGTCTCCCTCCTATTGCTGCT
AATGAGCCAATTTTATGCCTAATTTGGGAGCAGATCGCTATTTTGTACACGGGGAGTGTT
GATGACAGATCAGACGCGGCTAATTCGCTTGTTTCTTTAGCCAGAGACAATGACCGGTAT
GGAAAATTGATTATTGAAGAAGGTGGAGTTGGACCATTGCTGAAATTGTTGAAGGAAGGG
AAATCAGAAGGTCAGGAGAATGCTGCTAGGGCAATTGGTCTTCTTGGGCGTGACCCGGAA
AGCGTTGAACACATGATACATGCTGGGGTTTGCTCAGTGTTTGCGAAAATTCTCAAAGAA
GGTCCTATGAAGGTTCAAGCAGTGGTGGCTTGGGCAGTATCTGAGCTTGCTGCTCATTAT
CCCAAATGTCAAGATCTTTTTCACCAGCATAATACAATTCGATTGCTGGTTAGTCATCTT
GCTTTCGAGACGGTTCCGGAGCATAGTAAATACGCCATTGTCAGCAAAGCCACATCGATG
CACCACGCTGTTGTCTTGGCTAGTAATACCAATGGTAGCGCTGCCGATACTGTGCATAAG
TTGATTGAGGATGATGACAAAAATCACACTCTTCCACATCCCTTGGGGAATAAGAAGCCT
AATCACATGCACAGTGTGGTTGCTACAGCAATGAAGGGTCAAATAAAACAGCCTCAGCAG
AATCCTGTCAATAGTTTAAATCAGACCAAGGTTAATGGAAATAACAGTCAGAAGCAAAAT
CAAGCGCACCACCACAGTCAGCATAGTCTTTCTTCATCTGGGCTGAATAATAAAGGGAGA
GAACTAGAGGACCCTGCTACTAAGGCTTATATGAAGGCAATGGCTGCAAGAGCACTATGG
AAACTTGCCAAGGGAAATTCGCCCATTTGTCGTAGTATCACTGAATCAAGAGCACTGCTT
TGTTTTGCAGTACTGTTAGAGAAAGGACCTGAAGATGCTCAGTATGATTCTGCTATGGCA
ATAATGGAAATAACATCTGTGGCGGAAGTAGATGCTGAGTTGAGAAGGTCAGCCTTCAAG
CCTAATTCCCCTGCCTGCAAAGCTGTTGTTGATCAATTGCTAAGAATCATTGAACAAGCT
GATTCAGATCAGCTTGTTCCATGTGTTAAAGCTATTGGGAGTTTGGCTAGGACTTTTCGA
GCTACTGAGACAAGGATGATTACTCCGTTAGTAAAACTGCTTGATGAGCGAGAAGCAGAT
ATTTCTAAGGAAGCTGCCATTGCCCTAAAAAAATTTGCTAGCTCGGATAATTACCTTCAC
CTTGATCATTCCAAGGCAATCATAAGTGCTGGAGGGGCAAAACATCTGATCCAACTTGTT
TACTTTGGTGAACAAATAGTTCAAAGTCCTGCATTGCTTTTGCTATGCTACATTGCATTG
CACGTCCCTGATAGCGAAGAGCTTGCTCAAGCTGAGGTGCTTACAGTTCTTGAATGGGCA
TCAAAACAGTCATACTTGATTCAAGATGAATATATGGAGTCTTTACTGCAGGAATCTAAA
AGCAGGCTGGAACTCTATCAGTCCAGAGGATCAAGGGGATTCCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006366
PEP Infomation

pacid=37427648 transcript=PGSC0003DMT400009190 locus=PGSC0003DMG400003566 ID=PGSC0003DMT400009190.v4.03 annot-version=v4.03
Sequence

MADLVKQILTKPIQLADQVIKAADEASSFKQECTDLRSKTEKLVALLRQAARAGNDLYER
PTRRIIDDTEQVLEKASALVLKCRAHGLVKRVFTIIPAAQFRKMSSQLENSIGDVSWLLR
VSASADERADDCLGLPPIAANEPILCLIWEQIAILYTGSVDDRSDAANSLVSLARDNDRY
GKLIIEEGGVGPLLKLLKEGKSEGQENAARAIGLLGRDPESVEHMIHAGVCSVFAKILKE
GPMKVQAVVAWAVSELAAHYPKCQDLFHQHNTIRLLVSHLAFETVPEHSKYAIVSKATSM
HHAVVLASNTNGSAADTVHKLIEDDDKNHTLPHPLGNKKPNHMHSVVATAMKGQIKQPQQ
NPVNSLNQTKVNGNNSQKQNQAHHHSQHSLSSSGLNNKGRELEDPATKAYMKAMAARALW
KLAKGNSPICRSITESRALLCFAVLLEKGPEDAQYDSAMAIMEITSVAEVDAELRRSAFK
PNSPACKAVVDQLLRIIEQADSDQLVPCVKAIGSLARTFRATETRMITPLVKLLDEREAD
ISKEAAIALKKFASSDNYLHLDHSKAIISAGGAKHLIQLVYFGEQIVQSPALLLLCYIAL
HVPDSEELAQAEVLTVLEWASKQSYLIQDEYMESLLQESKSRLELYQSRGSRGFH*

Transcript Sequence

Transcript ID

PGSC0003DMT400009190
Transcript Infomation

pacid=37427648 locus=PGSC0003DMG400003566 ID=PGSC0003DMT400009190.v4.03 annot-version=v4.03
Sequence

ATGGCGGACCTAGTGAAGCAGATCTTGACAAAGCCGATCCAGTTAGCAGACCAGGTGATA
AAGGCAGCCGATGAGGCAAGTTCCTTCAAGCAAGAATGTACTGATCTCAGGTCTAAAACT
GAGAAACTTGTGGCTCTTCTCCGTCAGGCTGCACGCGCCGGCAACGACCTTTATGAACGG
CCCACGCGTCGGATCATTGACGATACTGAACAAGTTCTTGAAAAAGCTTCGGCGCTTGTG
CTAAAGTGCAGAGCCCATGGACTTGTAAAGCGAGTTTTTACCATCATCCCTGCTGCGCAA
TTCCGTAAAATGTCTTCTCAGTTGGAAAACTCCATTGGTGACGTGTCTTGGCTTCTCCGT
GTTTCGGCTTCAGCTGATGAACGAGCTGATGACTGTTTGGGTCTCCCTCCTATTGCTGCT
AATGAGCCAATTTTATGCCTAATTTGGGAGCAGATCGCTATTTTGTACACGGGGAGTGTT
GATGACAGATCAGACGCGGCTAATTCGCTTGTTTCTTTAGCCAGAGACAATGACCGGTAT
GGAAAATTGATTATTGAAGAAGGTGGAGTTGGACCATTGCTGAAATTGTTGAAGGAAGGG
AAATCAGAAGGTCAGGAGAATGCTGCTAGGGCAATTGGTCTTCTTGGGCGTGACCCGGAA
AGCGTTGAACACATGATACATGCTGGGGTTTGCTCAGTGTTTGCGAAAATTCTCAAAGAA
GGTCCTATGAAGGTTCAAGCAGTGGTGGCTTGGGCAGTATCTGAGCTTGCTGCTCATTAT
CCCAAATGTCAAGATCTTTTTCACCAGCATAATACAATTCGATTGCTGGTTAGTCATCTT
GCTTTCGAGACGGTTCCGGAGCATAGTAAATACGCCATTGTCAGCAAAGCCACATCGATG
CACCACGCTGTTGTCTTGGCTAGTAATACCAATGGTAGCGCTGCCGATACTGTGCATAAG
TTGATTGAGGATGATGACAAAAATCACACTCTTCCACATCCCTTGGGGAATAAGAAGCCT
AATCACATGCACAGTGTGGTTGCTACAGCAATGAAGGGTCAAATAAAACAGCCTCAGCAG
AATCCTGTCAATAGTTTAAATCAGACCAAGGTTAATGGAAATAACAGTCAGAAGCAAAAT
CAAGCGCACCACCACAGTCAGCATAGTCTTTCTTCATCTGGGCTGAATAATAAAGGGAGA
GAACTAGAGGACCCTGCTACTAAGGCTTATATGAAGGCAATGGCTGCAAGAGCACTATGG
AAACTTGCCAAGGGAAATTCGCCCATTTGTCGTAGTATCACTGAATCAAGAGCACTGCTT
TGTTTTGCAGTACTGTTAGAGAAAGGACCTGAAGATGCTCAGTATGATTCTGCTATGGCA
ATAATGGAAATAACATCTGTGGCGGAAGTAGATGCTGAGTTGAGAAGGTCAGCCTTCAAG
CCTAATTCCCCTGCCTGCAAAGCTGTTGTTGATCAATTGCTAAGAATCATTGAACAAGCT
GATTCAGATCAGCTTGTTCCATGTGTTAAAGCTATTGGGAGTTTGGCTAGGACTTTTCGA
GCTACTGAGACAAGGATGATTACTCCGTTAGTAAAACTGCTTGATGAGCGAGAAGCAGAT
ATTTCTAAGGAAGCTGCCATTGCCCTAAAAAAATTTGCTAGCTCGGATAATTACCTTCAC
CTTGATCATTCCAAGGCAATCATAAGTGCTGGAGGGGCAAAACATCTGATCCAACTTGTT
TACTTTGGTGAACAAATAGTTCAAAGTCCTGCATTGCTTTTGCTATGCTACATTGCATTG
CACGTCCCTGATAGCGAAGAGCTTGCTCAAGCTGAGGTGCTTACAGTTCTTGAATGGGCA
TCAAAACAGTCATACTTGATTCAAGATGAATATATGGAGTCTTTACTGCAGGAATCTAAA
AGCAGGCTGGAACTCTATCAGTCCAGAGGATCAAGGGGATTCCATTAA