Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009178
CDS Infomation

pacid=37426491 polypeptide=PGSC0003DMP400006362 locus=PGSC0003DMG400003564 ID=PGSC0003DMT400009178.v4.03 annot-version=v4.03
Sequence

ATGGGCAATATATGTTTTTCTAGCTCAAAAGTTAGTGGTTCTAACAGCAACACCCCTTCC
ACCACCAATACCGCCACCGTGAATGGCCACCGTAATCGGCGGAGCTCAGCGAAACCGGTT
TCTGCAACAACAAATACATCAAGAAAACAAGAGGGGTCTCATTACAATCGACAGAAAGGT
AAGGATAACGGTGGGGTTAAGCAACAAACGAAAAATGTTAAGCATAATACGAGGAGGCAA
AGTGGGGTTATTCCTTGTGGGAAAAGAACGGATTTTGGGTATGATAAAGATTTTGATAAG
AAGTTTACAATTGGGAAGTTGTTGGGTCATGGACAATTTGGATACACATATGTTGCCACA
GATAAGTCTAATGGAAATCGCGTGGCTGTCAAGAGAATTGAAAAGAAAAAGATGGTTGTT
CCAATTGCAGTTGAGGATGTAAAACGAGAAGTCAAGATATTGAAGGCCCTAGCTGGTCAC
GAGAATGTAGTTGATTTCTATAATGCATTTGAGGATGATAACTATGTTTACATAGTAATG
GAGTTATGCGAGGGCGGAGAACTGTTGGACCGCATTTTGGCCAAAAAGGACAGCCGTTAT
ACCGAGAAAGATGCAGCAATAGTTGTGGGTCAGATGCTGAAAGTTGCCGCTCAGTGTCAT
TTACATGGTTTGGTGCATCGTGATATGAAACCTGAGAATTTTCTCTTTAAATCTCCAAAG
GAGGACTCACCACTAAAGGCCACAGATTTTGGTCTTTCAGACTTCATAAGACCAGGGAAG
AAATTCCAAGATATAGTAGGAAGTGCATATTACGTAGCCCCAGAGGTATTAAAGCGTAAA
TCTGGACCTGAATCAGATGTGTGGAGCATTGGTGTAATTACATTCATTTTGCTTTGTGGT
CGTCGGCCCTTCTGGGATAAAACAGAGGATGGCATATTCAAGGAGGTCCTACGAAACAAA
CCTGATTTTCGTCGCAAGCCATGGCCAACTATAAGCAACAGTGCTAAAGATTTTGTTAAG
AAATTATTGGTGAAAGATCCTCGTGCTAGACTTACTGCTGCCCAGGCCCTATCACATCCA
TGGGTCCGTGAAGGAGGTGATGCTTCTGAGATTCCACTAGACATTTCTGTCTTGTCCAAC
ATGCGACAGTTTGTCAAATACAGTCGATTAAAACAATTTGCATTACGGGTAACTTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400006362
PEP Infomation

pacid=37426491 transcript=PGSC0003DMT400009178 locus=PGSC0003DMG400003564 ID=PGSC0003DMT400009178.v4.03 annot-version=v4.03
Sequence

MGNICFSSSKVSGSNSNTPSTTNTATVNGHRNRRSSAKPVSATTNTSRKQEGSHYNRQKG
KDNGGVKQQTKNVKHNTRRQSGVIPCGKRTDFGYDKDFDKKFTIGKLLGHGQFGYTYVAT
DKSNGNRVAVKRIEKKKMVVPIAVEDVKREVKILKALAGHENVVDFYNAFEDDNYVYIVM
ELCEGGELLDRILAKKDSRYTEKDAAIVVGQMLKVAAQCHLHGLVHRDMKPENFLFKSPK
EDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITFILLCG
RRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSHP
WVREGGDASEIPLDISVLSNMRQFVKYSRLKQFALRVTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400009178
Transcript Infomation

pacid=37426491 locus=PGSC0003DMG400003564 ID=PGSC0003DMT400009178.v4.03 annot-version=v4.03
Sequence

ATGGGCAATATATGTTTTTCTAGCTCAAAAGTTAGTGGTTCTAACAGCAACACCCCTTCC
ACCACCAATACCGCCACCGTGAATGGCCACCGTAATCGGCGGAGCTCAGCGAAACCGGTT
TCTGCAACAACAAATACATCAAGAAAACAAGAGGGGTCTCATTACAATCGACAGAAAGGT
AAGGATAACGGTGGGGTTAAGCAACAAACGAAAAATGTTAAGCATAATACGAGGAGGCAA
AGTGGGGTTATTCCTTGTGGGAAAAGAACGGATTTTGGGTATGATAAAGATTTTGATAAG
AAGTTTACAATTGGGAAGTTGTTGGGTCATGGACAATTTGGATACACATATGTTGCCACA
GATAAGTCTAATGGAAATCGCGTGGCTGTCAAGAGAATTGAAAAGAAAAAGATGGTTGTT
CCAATTGCAGTTGAGGATGTAAAACGAGAAGTCAAGATATTGAAGGCCCTAGCTGGTCAC
GAGAATGTAGTTGATTTCTATAATGCATTTGAGGATGATAACTATGTTTACATAGTAATG
GAGTTATGCGAGGGCGGAGAACTGTTGGACCGCATTTTGGCCAAAAAGGACAGCCGTTAT
ACCGAGAAAGATGCAGCAATAGTTGTGGGTCAGATGCTGAAAGTTGCCGCTCAGTGTCAT
TTACATGGTTTGGTGCATCGTGATATGAAACCTGAGAATTTTCTCTTTAAATCTCCAAAG
GAGGACTCACCACTAAAGGCCACAGATTTTGGTCTTTCAGACTTCATAAGACCAGGGAAG
AAATTCCAAGATATAGTAGGAAGTGCATATTACGTAGCCCCAGAGGTATTAAAGCGTAAA
TCTGGACCTGAATCAGATGTGTGGAGCATTGGTGTAATTACATTCATTTTGCTTTGTGGT
CGTCGGCCCTTCTGGGATAAAACAGAGGATGGCATATTCAAGGAGGTCCTACGAAACAAA
CCTGATTTTCGTCGCAAGCCATGGCCAACTATAAGCAACAGTGCTAAAGATTTTGTTAAG
AAATTATTGGTGAAAGATCCTCGTGCTAGACTTACTGCTGCCCAGGCCCTATCACATCCA
TGGGTCCGTGAAGGAGGTGATGCTTCTGAGATTCCACTAGACATTTCTGTCTTGTCCAAC
ATGCGACAGTTTGTCAAATACAGTCGATTAAAACAATTTGCATTACGGGTAACTTCATAG