Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009175
CDS Infomation

pacid=37426593 polypeptide=PGSC0003DMP400006359 locus=PGSC0003DMG400003563 ID=PGSC0003DMT400009175.v4.03 annot-version=v4.03
Sequence

ATGGCACCTTCAACACTAACAGCTCTAGCTAATGAAAAGACCCTTCAAACAAGTTTTATT
AGGGATGAAGAAGAACGTCCAAAAGTGGCTTACAATAAATTTAGTGACGAAATTCCAGTA
ATATCGTTGCAAGGTATTGATGATATTAATGGAAGTCGAAGAAGTGAAATATGTGAGAAA
ATTGTAAATGCTTGTGAAGATTGGGGTGTTTTTCAGGTAACTGATCATGGGGTCGATGCT
CAATTAATATCAGAAATGACAAAATTGGCAAAGGAATTTTTCGAATTGCCTCCTGACGAA
AAGCTTCGGTTTGACATGTCTGGTGGCAAGAAAGGCGGCTTTATTGTCTCAAGCCATTTA
CAGGGTGAAGTGGTTCAAGACTGGCGTGAAATAGTGACCTACTTTTCATACCCAATTCGA
GCTAGAGACTACTCTAGATGGCCAGACAAACCACAAGGCTGGAAAGCTGTAACTGAGAAA
TACAGTGAAAAATTAATGGACTTAGCTTGCAAATTATTAGAAGTACTGTCAGAGGCAATG
GGCTTAGAGAAAGAGGCTTTAACCAAGGCATGTGTGGATATGGACCAAAAAGTAGTTGTC
AATTTTTACCCAAAGTGTCCAGAGCCTGACCTTACCCTTGGGCTGAAACGACATACTGAT
CCAGGAACCATCACCCTCTTGTTACAAGACCAAGTTGGTGGGCTTCAAGCCACTAAAGAT
AATGGCAAAACTTGGATCACTGTTCAGCCCGTTGAAGGCGCTTTTGTTGTTAATCTTGGT
GATCATGGTCATTATTTGAGCAATGGGAGGTTCAAGAATGCTGATCATCAAGCAGTTGTG
AATTCGAATAGCAGCAGATTATCGATAGCCACTTTTCAGAATCCAGCACCGGATGCAAAA
GTGTATCCGTTAAAAATTAGGGAAGGAGAGAAGGCAATAATGGATGAGCCGATTACATTT
GCAGAAATGTACAGGAGGAAAATGAGTAAGGATCTTGAGCTTGCTAGGCTCAAGAAACTG
GCCAAGGAACAGACTGAAGAGGCCAAGTTGGAGTCCAAGCCCATTGAGGAAATTCTTGCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400006359
PEP Infomation

pacid=37426593 transcript=PGSC0003DMT400009175 locus=PGSC0003DMG400003563 ID=PGSC0003DMT400009175.v4.03 annot-version=v4.03
Sequence

MAPSTLTALANEKTLQTSFIRDEEERPKVAYNKFSDEIPVISLQGIDDINGSRRSEICEK
IVNACEDWGVFQVTDHGVDAQLISEMTKLAKEFFELPPDEKLRFDMSGGKKGGFIVSSHL
QGEVVQDWREIVTYFSYPIRARDYSRWPDKPQGWKAVTEKYSEKLMDLACKLLEVLSEAM
GLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKD
NGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDAK
VYPLKIREGEKAIMDEPITFAEMYRRKMSKDLELARLKKLAKEQTEEAKLESKPIEEILA
*

Transcript Sequence

Transcript ID

PGSC0003DMT400009175
Transcript Infomation

pacid=37426593 locus=PGSC0003DMG400003563 ID=PGSC0003DMT400009175.v4.03 annot-version=v4.03
Sequence

ATGGCACCTTCAACACTAACAGCTCTAGCTAATGAAAAGACCCTTCAAACAAGTTTTATT
AGGGATGAAGAAGAACGTCCAAAAGTGGCTTACAATAAATTTAGTGACGAAATTCCAGTA
ATATCGTTGCAAGGTATTGATGATATTAATGGAAGTCGAAGAAGTGAAATATGTGAGAAA
ATTGTAAATGCTTGTGAAGATTGGGGTGTTTTTCAGGTAACTGATCATGGGGTCGATGCT
CAATTAATATCAGAAATGACAAAATTGGCAAAGGAATTTTTCGAATTGCCTCCTGACGAA
AAGCTTCGGTTTGACATGTCTGGTGGCAAGAAAGGCGGCTTTATTGTCTCAAGCCATTTA
CAGGGTGAAGTGGTTCAAGACTGGCGTGAAATAGTGACCTACTTTTCATACCCAATTCGA
GCTAGAGACTACTCTAGATGGCCAGACAAACCACAAGGCTGGAAAGCTGTAACTGAGAAA
TACAGTGAAAAATTAATGGACTTAGCTTGCAAATTATTAGAAGTACTGTCAGAGGCAATG
GGCTTAGAGAAAGAGGCTTTAACCAAGGCATGTGTGGATATGGACCAAAAAGTAGTTGTC
AATTTTTACCCAAAGTGTCCAGAGCCTGACCTTACCCTTGGGCTGAAACGACATACTGAT
CCAGGAACCATCACCCTCTTGTTACAAGACCAAGTTGGTGGGCTTCAAGCCACTAAAGAT
AATGGCAAAACTTGGATCACTGTTCAGCCCGTTGAAGGCGCTTTTGTTGTTAATCTTGGT
GATCATGGTCATTATTTGAGCAATGGGAGGTTCAAGAATGCTGATCATCAAGCAGTTGTG
AATTCGAATAGCAGCAGATTATCGATAGCCACTTTTCAGAATCCAGCACCGGATGCAAAA
GTGTATCCGTTAAAAATTAGGGAAGGAGAGAAGGCAATAATGGATGAGCCGATTACATTT
GCAGAAATGTACAGGAGGAAAATGAGTAAGGATCTTGAGCTTGCTAGGCTCAAGAAACTG
GCCAAGGAACAGACTGAAGAGGCCAAGTTGGAGTCCAAGCCCATTGAGGAAATTCTTGCT
TAA