Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009156
CDS Infomation

pacid=37424645 polypeptide=PGSC0003DMP400006353 locus=PGSC0003DMG400003560 ID=PGSC0003DMT400009156.v4.03 annot-version=v4.03
Sequence

ATGTCCGACCACCAGCGAACTCGGAAGGACGATCCCTTCCTTCTCAATTACAACTCCGAT
GAACTCCGTATCGCCTCCGAGTTTCTCTCCAATTGGCTCCCCTTTCTCTCCCGTGACCTT
TGCCGCTCCTGCACCCAGACCCTCTCCGATCGCATCCGATCCCTCAATTTTAAAGTTAGT
GGTAATGCAGAATGCTTGAAGCAACCAAAGAATGTGAGTGTTTTGACTTGTGATTCGGAT
GGATGCAATGGGAGTCAAGAAAATTGTGACAACAATTCGCTTGGAAGTTGGAATGATTAC
GGTGACTTGAATGATAATGCAGATACAAACTCATTGGGGAGTTGGAAAGATGGGGCTGGT
GGGGAGCCCTTTGAGGAGCTTTCTGTGGACAGAAATTCATCTGACAGTTGTATAGATGGC
GCAGATTCTCAATCTCAACCTGTTGGAGAGGCATCTACAAGTGAAGCATTCAACTCATCC
TTACCTGTGACTACCCCAAAAGTGAAGATGTCATGGGCAGATATGGCTCAGGAGGATGAA
CTTCAAGCTGAGGAAGTGAATGAGTCAATTGCCTTGAGAAGTCAGGTGAATGGTGTGGCT
GAACAGGAAATTACTACTCCGGAGAGTAAGCAAAAAACAGAATTGTCAAGGGAGCAACGA
GAGTACATTAGATTCTGTAATGTGAAGAGGAAAAAGGATTTCATATGTTTGGAGAGGGTG
AGCGGGAAAATTGTGAATATACTTGATGGATTGGAGCTACATAAGGGTGTCTTTAGCGCC
GCTGAGCAAATTAGAATAGTTAAATATGTGGAGAAGCTTGACCAGATGGGGAAGAATGGG
GAACTGAAAGAGAGGACTTATACTACACCAACAAAGTGGATGAGGGGCAAAGGACGTGTG
ACAATCCAATTTGGCTGTTGTTACAACTATGCACCAGATAAGAGTGGCAATCCCCCAGGG
ATCCTCAAAAGTGGAACTGTTGATCCATTGCCTGATCTTTTGAAGGTCATGATTAGAAGG
CTTGTAAGGTGGCATGTGATGCCTTCAACTTGTGTTCCAGACAGCTGTATTATCAACATT
TACGAAGAAGGCGATTGCATACCACCACATATTGACAATCATGATTTTGTGCGCCCATTT
TGTACTGTTTCATTCCTTAGCGAGTGCAACATTGTGTTCGGATCCAACTTGAAAATAGTG
GGTCCTGGTGAATTTGCTGGTGCGATTGCAATACCGTTGCCAGTGGGATCTGTACTTGTC
TTGAATGGAAATGGAGCTGATGTAGCTAAACACTGTGTGCCAGCTGTGCCTACTAAGAGG
ATTTCAATCACATTTAGAAGAATGGATGAATCTAAAAGGCCAACTGGATATGTTCCCGAG
CATGATTTACATGGGTTGCAGCCCTTGTCATATGAAGCAGACTCGCAAAAGAAATCAAGC
TCCTCTAGGCCAAGGTTTTCCTCAAGAAAACAGTCAGTGAGACAAGAAGAGGAGAGCATG
GAAAGAGTAAAGATGCCAATGAGAAGGCATTCGGAGCCCCGTTATCCAGGTCGATATCGA
CGAGGACCTGCAAACAGGCAGTGGTATGAAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006353
PEP Infomation

pacid=37424645 transcript=PGSC0003DMT400009156 locus=PGSC0003DMG400003560 ID=PGSC0003DMT400009156.v4.03 annot-version=v4.03
Sequence

MSDHQRTRKDDPFLLNYNSDELRIASEFLSNWLPFLSRDLCRSCTQTLSDRIRSLNFKVS
GNAECLKQPKNVSVLTCDSDGCNGSQENCDNNSLGSWNDYGDLNDNADTNSLGSWKDGAG
GEPFEELSVDRNSSDSCIDGADSQSQPVGEASTSEAFNSSLPVTTPKVKMSWADMAQEDE
LQAEEVNESIALRSQVNGVAEQEITTPESKQKTELSREQREYIRFCNVKRKKDFICLERV
SGKIVNILDGLELHKGVFSAAEQIRIVKYVEKLDQMGKNGELKERTYTTPTKWMRGKGRV
TIQFGCCYNYAPDKSGNPPGILKSGTVDPLPDLLKVMIRRLVRWHVMPSTCVPDSCIINI
YEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGEFAGAIAIPLPVGSVLV
LNGNGADVAKHCVPAVPTKRISITFRRMDESKRPTGYVPEHDLHGLQPLSYEADSQKKSS
SSRPRFSSRKQSVRQEEESMERVKMPMRRHSEPRYPGRYRRGPANRQWYEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400009156
Transcript Infomation

pacid=37424645 locus=PGSC0003DMG400003560 ID=PGSC0003DMT400009156.v4.03 annot-version=v4.03
Sequence

ATGTCCGACCACCAGCGAACTCGGAAGGACGATCCCTTCCTTCTCAATTACAACTCCGAT
GAACTCCGTATCGCCTCCGAGTTTCTCTCCAATTGGCTCCCCTTTCTCTCCCGTGACCTT
TGCCGCTCCTGCACCCAGACCCTCTCCGATCGCATCCGATCCCTCAATTTTAAAGTTAGT
GGTAATGCAGAATGCTTGAAGCAACCAAAGAATGTGAGTGTTTTGACTTGTGATTCGGAT
GGATGCAATGGGAGTCAAGAAAATTGTGACAACAATTCGCTTGGAAGTTGGAATGATTAC
GGTGACTTGAATGATAATGCAGATACAAACTCATTGGGGAGTTGGAAAGATGGGGCTGGT
GGGGAGCCCTTTGAGGAGCTTTCTGTGGACAGAAATTCATCTGACAGTTGTATAGATGGC
GCAGATTCTCAATCTCAACCTGTTGGAGAGGCATCTACAAGTGAAGCATTCAACTCATCC
TTACCTGTGACTACCCCAAAAGTGAAGATGTCATGGGCAGATATGGCTCAGGAGGATGAA
CTTCAAGCTGAGGAAGTGAATGAGTCAATTGCCTTGAGAAGTCAGGTGAATGGTGTGGCT
GAACAGGAAATTACTACTCCGGAGAGTAAGCAAAAAACAGAATTGTCAAGGGAGCAACGA
GAGTACATTAGATTCTGTAATGTGAAGAGGAAAAAGGATTTCATATGTTTGGAGAGGGTG
AGCGGGAAAATTGTGAATATACTTGATGGATTGGAGCTACATAAGGGTGTCTTTAGCGCC
GCTGAGCAAATTAGAATAGTTAAATATGTGGAGAAGCTTGACCAGATGGGGAAGAATGGG
GAACTGAAAGAGAGGACTTATACTACACCAACAAAGTGGATGAGGGGCAAAGGACGTGTG
ACAATCCAATTTGGCTGTTGTTACAACTATGCACCAGATAAGAGTGGCAATCCCCCAGGG
ATCCTCAAAAGTGGAACTGTTGATCCATTGCCTGATCTTTTGAAGGTCATGATTAGAAGG
CTTGTAAGGTGGCATGTGATGCCTTCAACTTGTGTTCCAGACAGCTGTATTATCAACATT
TACGAAGAAGGCGATTGCATACCACCACATATTGACAATCATGATTTTGTGCGCCCATTT
TGTACTGTTTCATTCCTTAGCGAGTGCAACATTGTGTTCGGATCCAACTTGAAAATAGTG
GGTCCTGGTGAATTTGCTGGTGCGATTGCAATACCGTTGCCAGTGGGATCTGTACTTGTC
TTGAATGGAAATGGAGCTGATGTAGCTAAACACTGTGTGCCAGCTGTGCCTACTAAGAGG
ATTTCAATCACATTTAGAAGAATGGATGAATCTAAAAGGCCAACTGGATATGTTCCCGAG
CATGATTTACATGGGTTGCAGCCCTTGTCATATGAAGCAGACTCGCAAAAGAAATCAAGC
TCCTCTAGGCCAAGGTTTTCCTCAAGAAAACAGTCAGTGAGACAAGAAGAGGAGAGCATG
GAAAGAGTAAAGATGCCAATGAGAAGGCATTCGGAGCCCCGTTATCCAGGTCGATATCGA
CGAGGACCTGCAAACAGGCAGTGGTATGAAAATTGA