Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009131
CDS Infomation

pacid=37427522 polypeptide=PGSC0003DMP400006337 locus=PGSC0003DMG400003550 ID=PGSC0003DMT400009131.v4.03 annot-version=v4.03
Sequence

ATGGGTACAATGGCGACTGTTGATGAGGTGGCGAAGGAGGCTAGTGGCCGCGAAGAAAGA
ATTTTGGTGTCGGTGCGTCTGAGGCCTTTGAATGATAAAGAAATTTTAAGAAATGATGTT
TCAGATTGGGAGTGTATTAATGACACTACAATTATTTACAAAAATGTTAATCTTTCTTTG
TCTGAACGCTCTATGTATCCCTCTGCTTATACATTTGACAGGGTATTTAGGACTAATTGC
TCCACAAGACAGGTGTATGAAGAAACTGCTAAAGATGTTGCTCTTTCTGTTCTTAGTGGA
TTCAATTCAAGCGTATTCGCGTATGGCCAAACGAGCAGTGGAAAGACGTATACTATGACT
GGTATAACTGAATATGCTATAGCTGATATATATGACTACATTCAGAAGCACTCCGAGAGA
GACTTTATTTTGAAGTTCTCTGCTATGGAGATTTACAATGAATCTGTCAGAGATCTCCTT
AGTGCTGATACCACTCTTCTTAGACTTCTAGATGACCCCGAGAGAGGAACAATTGTTGAG
AAGCTCACAGAGGAAACATTGAGGGATTGGAACCACGTCATTCAGCTACTTTCTATTTGT
GAAGCTCAGAGACAGATAGGAGAAACCGCGCTCAATGAGACCAGCTCCAGATCTCATCAA
ATTATCAGACTGACAATTGAAAGTTCTGCGCGGGAGTATTTAGGCAGGGACAATTCCAGT
TCTCTTTCAGCTACTGTGAATTTTGTTGATTTAGCTGGAAGTGAGCGTGCATCTCAGTCA
TTGTCAGCTGGCACAAGGCTGAAAGAGGGCTGCCACATAAATCGCAGTTTGCTGACTTTG
GGCACTGTTATACGCAAGCTAAGCAAGGGTAGGAATGGTCACATTCCATTCCGAGATTCA
AAGTTAACTAGGATACTACAACCATCATTGGGTGGCAATGGTAGAACTGCCATCATCTGT
ACAATGAGCCCTGCACGAAGTCATGTTGAGCAATCAAGGAATACTCTTCTGTTTGCAAGT
TGTGCCAAGGAAGTAACTACTACTGCCCAAGTGAATGTAGTCGTCTCAGATAAAGTTTTA
GTGAAGCATTTGCAGAGGGAGTTGACGAGATTGGAGAACGAGTTAAGGAGTCCTAGAACT
TCTCTATTCCCTTCAGATTATGAAGCATTGCTGCGAGAGAAGAACAAACAAATAGAACAG
ATGGAGAAGGAGATAAAGGACTTGACTATGCAGCGTGACATAGCTCAGACTCAAGTTAGA
GATATGCGACAACTGCTTGGAGATGATGCAGGTTTATTAATGCAGGTTGGTTTAGGAAAC
TACCCAAATCTGCGTGTGCGGAGATCACCAGATTATCGAAGCCCAATGCAAGTGTCCATT
TTGTCATACACTCCATCTATAGATGCTGATATTAGAACATGTTCAGATGGACATAGCAGG
AGTAGTTCTGAGGAACAAATTATACGCGTACCAGAGTTTGAAGAGAACTTTCTCCATAAC
AGTTCATCTCCAAGGTTATTAGCTGGCCGCAGTTCAAATTATAGTGAAAGTGATTCATGT
GAAGGATGGGATGAGATTGAAAAACAAAGTAATGGAACTAATTCAGAAGACCTATACAAG
GAAGTTCATTGCATTGAAACCAAGGAATCAAGTACGAAGGTAAAACAAGAATCCAAATTT
CCATCTCCTGAAGAAAGAAGTAAGTTTCCAGCTGAAATGACAGCAGATAATGAAGACAAA
GCAGATAAGGGAACAGTGTCACCTCCAGCAGACGACTATGGACGATTAGCACCACCTTTA
CTCAAGGAAAATAGAGAAGTCACATTGTTGCCCTGTAAAGAAGACGAAGAATTTGTGCCC
TTCTCATCTTTTAAGGAAGAAAAGAAAGATAGTGAAGAACCATTGTCACTTCCCTCAAAG
GATTCTCAAACCCTTGAATCACCAAAGTTCGCAGACAGTAGAGAGTCAGTAACATTGCCG
TTGAAAGAAGAGAAAGAGTTGAACTGTGTGCATACATTTGAGCCTCCTTCTCCAGCAAAT
TTATCCTCAACATATGAGCTCCTTGACGATTCACCAGGCTCAAGCATCTTGAAATTAAGT
AGAAGCAGAAGCTGTAAACCTAGCCTAATGGATGATCTATATTCTCCATGTTTTAAGGAA
CTCAACAAAAATGAAAATACTCCACCATCTCGGCCAGAAAGAAATGTCAACGCAACACCC
GAGTGTTGGGAAATCAAAATCTCTCCCCCGAACTTTACCTCCGATGTGAAGGACTCTCAA
GAGAAAAGTTCCACCTATTATGGCGAGACTGATGTCAATGAAGTGTCAAAAGGGGAAGAT
ACAGATAATGAGAGTGTCAATGATGTAGATGATGCAAGTGATGCAAGGACGGACGATACA
GATGAGCTTCAATATGAAAAGGAGGTCAAAGAGTGTCCTGAGGCTGAACTAGAGCATGAT
AGACCATCAAAGCGTGTCAAAGATGTCGGGTTGGACCCAATAGAAGATGATCTGAAAAGT
CTTCGCAGCTGGCCCTCGGAGTTCAAGATGCTACAGAAAGAGATTATTGAACTTTGGAAT
GCTTGCAACATTTCCCTTGTGCACAGAACATATTTCTTCCTTCTTTTTCAAGGTGATGCT
AAGGATGCAGTATATCTGGAGGTAGAGATCAGAAGACTGACCTTCCTCAACGACACATAT
TCGCATGGAGAGAAAACAGAGGTCAATGGCAGGACTTTGTCCCTTGCACAAAGCATGAAA
GACCTTCGTCAAGAGAGACGAATGCTGCGCAAGCAAATGCTGAGGAAGCTAACAGAAGAA
GAACGAGAAAGCCTGTACCTTAAGTGGGGCATTCAGATTAACAGCAAACATAGGAGGTTC
CAGTTGGTTCAGCGTTTGTGGAACAAGACAGATGATATGAACCACCTTGCAGATAGTGCT
TACCTGGTAGCAAAATTAACCGGATTGATGAAGCCAGGACAAGCTCCTAAAGAGATGTTT
GGTCTTGACTTTTCACCTAGACCATCTAGAACTTATAACTTCACGCGTAGTTTGATATCT
TCAATCTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006337
PEP Infomation

pacid=37427522 transcript=PGSC0003DMT400009131 locus=PGSC0003DMG400003550 ID=PGSC0003DMT400009131.v4.03 annot-version=v4.03
Sequence

MGTMATVDEVAKEASGREERILVSVRLRPLNDKEILRNDVSDWECINDTTIIYKNVNLSL
SERSMYPSAYTFDRVFRTNCSTRQVYEETAKDVALSVLSGFNSSVFAYGQTSSGKTYTMT
GITEYAIADIYDYIQKHSERDFILKFSAMEIYNESVRDLLSADTTLLRLLDDPERGTIVE
KLTEETLRDWNHVIQLLSICEAQRQIGETALNETSSRSHQIIRLTIESSAREYLGRDNSS
SLSATVNFVDLAGSERASQSLSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDS
KLTRILQPSLGGNGRTAIICTMSPARSHVEQSRNTLLFASCAKEVTTTAQVNVVVSDKVL
VKHLQRELTRLENELRSPRTSLFPSDYEALLREKNKQIEQMEKEIKDLTMQRDIAQTQVR
DMRQLLGDDAGLLMQVGLGNYPNLRVRRSPDYRSPMQVSILSYTPSIDADIRTCSDGHSR
SSSEEQIIRVPEFEENFLHNSSSPRLLAGRSSNYSESDSCEGWDEIEKQSNGTNSEDLYK
EVHCIETKESSTKVKQESKFPSPEERSKFPAEMTADNEDKADKGTVSPPADDYGRLAPPL
LKENREVTLLPCKEDEEFVPFSSFKEEKKDSEEPLSLPSKDSQTLESPKFADSRESVTLP
LKEEKELNCVHTFEPPSPANLSSTYELLDDSPGSSILKLSRSRSCKPSLMDDLYSPCFKE
LNKNENTPPSRPERNVNATPECWEIKISPPNFTSDVKDSQEKSSTYYGETDVNEVSKGED
TDNESVNDVDDASDARTDDTDELQYEKEVKECPEAELEHDRPSKRVKDVGLDPIEDDLKS
LRSWPSEFKMLQKEIIELWNACNISLVHRTYFFLLFQGDAKDAVYLEVEIRRLTFLNDTY
SHGEKTEVNGRTLSLAQSMKDLRQERRMLRKQMLRKLTEEERESLYLKWGIQINSKHRRF
QLVQRLWNKTDDMNHLADSAYLVAKLTGLMKPGQAPKEMFGLDFSPRPSRTYNFTRSLIS
SIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400009131
Transcript Infomation

pacid=37427522 locus=PGSC0003DMG400003550 ID=PGSC0003DMT400009131.v4.03 annot-version=v4.03
Sequence

ATGGGTACAATGGCGACTGTTGATGAGGTGGCGAAGGAGGCTAGTGGCCGCGAAGAAAGA
ATTTTGGTGTCGGTGCGTCTGAGGCCTTTGAATGATAAAGAAATTTTAAGAAATGATGTT
TCAGATTGGGAGTGTATTAATGACACTACAATTATTTACAAAAATGTTAATCTTTCTTTG
TCTGAACGCTCTATGTATCCCTCTGCTTATACATTTGACAGGGTATTTAGGACTAATTGC
TCCACAAGACAGGTGTATGAAGAAACTGCTAAAGATGTTGCTCTTTCTGTTCTTAGTGGA
TTCAATTCAAGCGTATTCGCGTATGGCCAAACGAGCAGTGGAAAGACGTATACTATGACT
GGTATAACTGAATATGCTATAGCTGATATATATGACTACATTCAGAAGCACTCCGAGAGA
GACTTTATTTTGAAGTTCTCTGCTATGGAGATTTACAATGAATCTGTCAGAGATCTCCTT
AGTGCTGATACCACTCTTCTTAGACTTCTAGATGACCCCGAGAGAGGAACAATTGTTGAG
AAGCTCACAGAGGAAACATTGAGGGATTGGAACCACGTCATTCAGCTACTTTCTATTTGT
GAAGCTCAGAGACAGATAGGAGAAACCGCGCTCAATGAGACCAGCTCCAGATCTCATCAA
ATTATCAGACTGACAATTGAAAGTTCTGCGCGGGAGTATTTAGGCAGGGACAATTCCAGT
TCTCTTTCAGCTACTGTGAATTTTGTTGATTTAGCTGGAAGTGAGCGTGCATCTCAGTCA
TTGTCAGCTGGCACAAGGCTGAAAGAGGGCTGCCACATAAATCGCAGTTTGCTGACTTTG
GGCACTGTTATACGCAAGCTAAGCAAGGGTAGGAATGGTCACATTCCATTCCGAGATTCA
AAGTTAACTAGGATACTACAACCATCATTGGGTGGCAATGGTAGAACTGCCATCATCTGT
ACAATGAGCCCTGCACGAAGTCATGTTGAGCAATCAAGGAATACTCTTCTGTTTGCAAGT
TGTGCCAAGGAAGTAACTACTACTGCCCAAGTGAATGTAGTCGTCTCAGATAAAGTTTTA
GTGAAGCATTTGCAGAGGGAGTTGACGAGATTGGAGAACGAGTTAAGGAGTCCTAGAACT
TCTCTATTCCCTTCAGATTATGAAGCATTGCTGCGAGAGAAGAACAAACAAATAGAACAG
ATGGAGAAGGAGATAAAGGACTTGACTATGCAGCGTGACATAGCTCAGACTCAAGTTAGA
GATATGCGACAACTGCTTGGAGATGATGCAGGTTTATTAATGCAGGTTGGTTTAGGAAAC
TACCCAAATCTGCGTGTGCGGAGATCACCAGATTATCGAAGCCCAATGCAAGTGTCCATT
TTGTCATACACTCCATCTATAGATGCTGATATTAGAACATGTTCAGATGGACATAGCAGG
AGTAGTTCTGAGGAACAAATTATACGCGTACCAGAGTTTGAAGAGAACTTTCTCCATAAC
AGTTCATCTCCAAGGTTATTAGCTGGCCGCAGTTCAAATTATAGTGAAAGTGATTCATGT
GAAGGATGGGATGAGATTGAAAAACAAAGTAATGGAACTAATTCAGAAGACCTATACAAG
GAAGTTCATTGCATTGAAACCAAGGAATCAAGTACGAAGGTAAAACAAGAATCCAAATTT
CCATCTCCTGAAGAAAGAAGTAAGTTTCCAGCTGAAATGACAGCAGATAATGAAGACAAA
GCAGATAAGGGAACAGTGTCACCTCCAGCAGACGACTATGGACGATTAGCACCACCTTTA
CTCAAGGAAAATAGAGAAGTCACATTGTTGCCCTGTAAAGAAGACGAAGAATTTGTGCCC
TTCTCATCTTTTAAGGAAGAAAAGAAAGATAGTGAAGAACCATTGTCACTTCCCTCAAAG
GATTCTCAAACCCTTGAATCACCAAAGTTCGCAGACAGTAGAGAGTCAGTAACATTGCCG
TTGAAAGAAGAGAAAGAGTTGAACTGTGTGCATACATTTGAGCCTCCTTCTCCAGCAAAT
TTATCCTCAACATATGAGCTCCTTGACGATTCACCAGGCTCAAGCATCTTGAAATTAAGT
AGAAGCAGAAGCTGTAAACCTAGCCTAATGGATGATCTATATTCTCCATGTTTTAAGGAA
CTCAACAAAAATGAAAATACTCCACCATCTCGGCCAGAAAGAAATGTCAACGCAACACCC
GAGTGTTGGGAAATCAAAATCTCTCCCCCGAACTTTACCTCCGATGTGAAGGACTCTCAA
GAGAAAAGTTCCACCTATTATGGCGAGACTGATGTCAATGAAGTGTCAAAAGGGGAAGAT
ACAGATAATGAGAGTGTCAATGATGTAGATGATGCAAGTGATGCAAGGACGGACGATACA
GATGAGCTTCAATATGAAAAGGAGGTCAAAGAGTGTCCTGAGGCTGAACTAGAGCATGAT
AGACCATCAAAGCGTGTCAAAGATGTCGGGTTGGACCCAATAGAAGATGATCTGAAAAGT
CTTCGCAGCTGGCCCTCGGAGTTCAAGATGCTACAGAAAGAGATTATTGAACTTTGGAAT
GCTTGCAACATTTCCCTTGTGCACAGAACATATTTCTTCCTTCTTTTTCAAGGTGATGCT
AAGGATGCAGTATATCTGGAGGTAGAGATCAGAAGACTGACCTTCCTCAACGACACATAT
TCGCATGGAGAGAAAACAGAGGTCAATGGCAGGACTTTGTCCCTTGCACAAAGCATGAAA
GACCTTCGTCAAGAGAGACGAATGCTGCGCAAGCAAATGCTGAGGAAGCTAACAGAAGAA
GAACGAGAAAGCCTGTACCTTAAGTGGGGCATTCAGATTAACAGCAAACATAGGAGGTTC
CAGTTGGTTCAGCGTTTGTGGAACAAGACAGATGATATGAACCACCTTGCAGATAGTGCT
TACCTGGTAGCAAAATTAACCGGATTGATGAAGCCAGGACAAGCTCCTAAAGAGATGTTT
GGTCTTGACTTTTCACCTAGACCATCTAGAACTTATAACTTCACGCGTAGTTTGATATCT
TCAATCTTGTAA