Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009129
CDS Infomation

pacid=37427417 polypeptide=PGSC0003DMP400006336 locus=PGSC0003DMG400003549 ID=PGSC0003DMT400009129.v4.03 annot-version=v4.03
Sequence

ATGTCAAGAAACTTTTCAGTTGGTAAAACTAAAGGACTTGGACAATCCTTATGCCGAAAT
CGGACTACTATCTGCTCAGAACAAGCGAGAAAATTAGAACTTATTGGGAATGGTGTATGT
CCTCCTATATGTAGATTTTATGGGCAATATGTATCTACTAGGGGATATGATTCATCTGTA
GCACGTAGAATGCGTAATACTTTCTATGGGAGTTATTCATTGACTTCACCGGGAACAGCT
GTAAGAAATCATGCAGAAGTTGCTTGGAAGAAGTTATCACGTAAATATTTCGATGAGGGG
CAAACTTTTATTCGCTTAAGTCGATTTGCACAAGCAGTTAGCTTGGCATTGAGCAGATCT
TATGTGATTCTCCCTAGTTTTCTTGCCATAACGTATGGAAGAAATATAGCACTGGCACAA
GCATCACCAGACTTGGAGTATGGTCTCCCAATGACTAGCTTCTACAGGCATGCTGAAAAC
GGACATTTTTTGGTTACCTCAGTGCTGCATTCCATATTTGAAGGTTTTGTTCTGCTGTTG
AGGGCCTTTTATTTGGGGATACTCTTTTCTCCTAGCATTGTAATGGCCCCATTTGCTGAT
GCATTTGGACCTTCTTTCAGGAAACTGTGGCTTCAGGTAGTCCGTAGCACACTCGAAAGA
GCAGGTCCTGCATTTATCAAATGGGGCCAGTGGGCAGCTACACGGCCTGATCTTTTCTCT
AAAGATTTGTGTACTGAGCTATCAAAGCTTCACACCAAAGCTCCTGAACATAGCTTCGAT
TACACGAAAAAGACAATCAAAAAAGCATTTGGTCGAGAGATTTCTGAAATTTTTGATGAA
TTTGAGGAGAAACCTCTGGCATCTGGAAGTATTGCTCAAGTGCATAGGGCTTCCTTGTTG
TATCCATACCGTGGTCGAAAGATCAAGCCTATAGTGGTGGCTGTTAAAGTTAGGCATCCT
GGAGTAGGTGAATTAATAAGACAAGATTTCGAGATTATTAATCTAGTTGCTAAGATATCA
CAGTGCATTCCTAAACTTAAGTGGTTAAGGTTGGATGAAAGCGTCCAGCAATTTGCTGTT
TTTATGATGTCTCAGGTTGATCTTGCTAGGGAGGCTGCACATTTAAGCCGCTTCATCTAT
AATTTCCGCAGATGGAAGGATGTCTCTTTTCCAAAGCCTGTCTATCCCCTAGTGCATCCT
GCTGTATTGGTGGAGACTTTTGAACAAGGGGAATGTGTTTCATATTATGTTGATGAGCTT
GAAGGCCATGAAAGACTTAAAAGTGCACTTGCTCATATTGGGACACATGCTCTTCTAAAG
ATGCTTTTGGTGGATAACTTTATTCATGCTGACATGCATCCTGGAAATATCCTTGTTCGG
GTAACCCAAAGCAAGTCATCTCGGAAACGAATCTTCAAATCAAAGCCTCATGTTGTTTTC
CTTGATGTAGGCATGACCGCTGAACTTACTAACAATGATCGGATAATATTATTGGAGTTC
TTTAAGGCAATTGCTCATCGAGATGGCCAAACTGTAGCAGAGTGCACTCTGCAATTGTCA
AAGAAACAGAATTGCCCTAATCCAGAAGCCTTCATTAAGGAAGTGAAGGAGTCATTTGAT
TTTTGGGGAACTCCAGAAGGTGATTTGGTCCACCCTGCTGATTGCATTGAGCAACTCCTT
GAGAAAGTTCGGCATCACAGAGTGAACATCGATGGTAATGTCTGCACTGTTATGGTGACA
ACTTTAGTCCTTGAGGTAATTCTTCCTTTTTCTACAAACGTGCGTTCATGTAACGTGAAA
TTGATTAACCTGCATTTCTTTATTCAAACATGTCAAAAGTACTTACTGACAAGTACTATA
ATCAGTCTGCTGAGTAGTGTTCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006336
PEP Infomation

pacid=37427417 transcript=PGSC0003DMT400009129 locus=PGSC0003DMG400003549 ID=PGSC0003DMT400009129.v4.03 annot-version=v4.03
Sequence

MSRNFSVGKTKGLGQSLCRNRTTICSEQARKLELIGNGVCPPICRFYGQYVSTRGYDSSV
ARRMRNTFYGSYSLTSPGTAVRNHAEVAWKKLSRKYFDEGQTFIRLSRFAQAVSLALSRS
YVILPSFLAITYGRNIALAQASPDLEYGLPMTSFYRHAENGHFLVTSVLHSIFEGFVLLL
RAFYLGILFSPSIVMAPFADAFGPSFRKLWLQVVRSTLERAGPAFIKWGQWAATRPDLFS
KDLCTELSKLHTKAPEHSFDYTKKTIKKAFGREISEIFDEFEEKPLASGSIAQVHRASLL
YPYRGRKIKPIVVAVKVRHPGVGELIRQDFEIINLVAKISQCIPKLKWLRLDESVQQFAV
FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETFEQGECVSYYVDEL
EGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVTQSKSSRKRIFKSKPHVVF
LDVGMTAELTNNDRIILLEFFKAIAHRDGQTVAECTLQLSKKQNCPNPEAFIKEVKESFD
FWGTPEGDLVHPADCIEQLLEKVRHHRVNIDGNVCTVMVTTLVLEVILPFSTNVRSCNVK
LINLHFFIQTCQKYLLTSTIISLLSSVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400009129
Transcript Infomation

pacid=37427417 locus=PGSC0003DMG400003549 ID=PGSC0003DMT400009129.v4.03 annot-version=v4.03
Sequence

ATGTCAAGAAACTTTTCAGTTGGTAAAACTAAAGGACTTGGACAATCCTTATGCCGAAAT
CGGACTACTATCTGCTCAGAACAAGCGAGAAAATTAGAACTTATTGGGAATGGTGTATGT
CCTCCTATATGTAGATTTTATGGGCAATATGTATCTACTAGGGGATATGATTCATCTGTA
GCACGTAGAATGCGTAATACTTTCTATGGGAGTTATTCATTGACTTCACCGGGAACAGCT
GTAAGAAATCATGCAGAAGTTGCTTGGAAGAAGTTATCACGTAAATATTTCGATGAGGGG
CAAACTTTTATTCGCTTAAGTCGATTTGCACAAGCAGTTAGCTTGGCATTGAGCAGATCT
TATGTGATTCTCCCTAGTTTTCTTGCCATAACGTATGGAAGAAATATAGCACTGGCACAA
GCATCACCAGACTTGGAGTATGGTCTCCCAATGACTAGCTTCTACAGGCATGCTGAAAAC
GGACATTTTTTGGTTACCTCAGTGCTGCATTCCATATTTGAAGGTTTTGTTCTGCTGTTG
AGGGCCTTTTATTTGGGGATACTCTTTTCTCCTAGCATTGTAATGGCCCCATTTGCTGAT
GCATTTGGACCTTCTTTCAGGAAACTGTGGCTTCAGGTAGTCCGTAGCACACTCGAAAGA
GCAGGTCCTGCATTTATCAAATGGGGCCAGTGGGCAGCTACACGGCCTGATCTTTTCTCT
AAAGATTTGTGTACTGAGCTATCAAAGCTTCACACCAAAGCTCCTGAACATAGCTTCGAT
TACACGAAAAAGACAATCAAAAAAGCATTTGGTCGAGAGATTTCTGAAATTTTTGATGAA
TTTGAGGAGAAACCTCTGGCATCTGGAAGTATTGCTCAAGTGCATAGGGCTTCCTTGTTG
TATCCATACCGTGGTCGAAAGATCAAGCCTATAGTGGTGGCTGTTAAAGTTAGGCATCCT
GGAGTAGGTGAATTAATAAGACAAGATTTCGAGATTATTAATCTAGTTGCTAAGATATCA
CAGTGCATTCCTAAACTTAAGTGGTTAAGGTTGGATGAAAGCGTCCAGCAATTTGCTGTT
TTTATGATGTCTCAGGTTGATCTTGCTAGGGAGGCTGCACATTTAAGCCGCTTCATCTAT
AATTTCCGCAGATGGAAGGATGTCTCTTTTCCAAAGCCTGTCTATCCCCTAGTGCATCCT
GCTGTATTGGTGGAGACTTTTGAACAAGGGGAATGTGTTTCATATTATGTTGATGAGCTT
GAAGGCCATGAAAGACTTAAAAGTGCACTTGCTCATATTGGGACACATGCTCTTCTAAAG
ATGCTTTTGGTGGATAACTTTATTCATGCTGACATGCATCCTGGAAATATCCTTGTTCGG
GTAACCCAAAGCAAGTCATCTCGGAAACGAATCTTCAAATCAAAGCCTCATGTTGTTTTC
CTTGATGTAGGCATGACCGCTGAACTTACTAACAATGATCGGATAATATTATTGGAGTTC
TTTAAGGCAATTGCTCATCGAGATGGCCAAACTGTAGCAGAGTGCACTCTGCAATTGTCA
AAGAAACAGAATTGCCCTAATCCAGAAGCCTTCATTAAGGAAGTGAAGGAGTCATTTGAT
TTTTGGGGAACTCCAGAAGGTGATTTGGTCCACCCTGCTGATTGCATTGAGCAACTCCTT
GAGAAAGTTCGGCATCACAGAGTGAACATCGATGGTAATGTCTGCACTGTTATGGTGACA
ACTTTAGTCCTTGAGGTAATTCTTCCTTTTTCTACAAACGTGCGTTCATGTAACGTGAAA
TTGATTAACCTGCATTTCTTTATTCAAACATGTCAAAAGTACTTACTGACAAGTACTATA
ATCAGTCTGCTGAGTAGTGTTCGATAA