Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009125
CDS Infomation

pacid=37424691 polypeptide=PGSC0003DMP400006332 locus=PGSC0003DMG400003547 ID=PGSC0003DMT400009125.v4.03 annot-version=v4.03
Sequence

ATGCAGAGACCAAGACGCCGCTGCGAAGGCACTGCCATGGGTTCTATTGTTCTCGATCTC
CGCCCTGGTGTTGGAATCGGTCCTTTTACTCTAGGAATGCCTATTTGTGAAGCTTTCGCG
CAGATAGAGCAGCAGCCTAATATTTATGACGTTGTCCATGTTAAGTATTACGACGAGGAG
CCCTTAAAACTTGACATTGTCATTAGCTTCCCAGATCATGGATTTCATTTGCGGTTTGAT
TCCTGGTCACAGAGACTGCGCCTTATTGAAATATTTGATGTAAAACGGCTTCAGATGCGC
TATGCCACCTCTGTTATAGGCGGGCCGTCCACTTTAGCCACTTTTGTAGCCGTCTATTCT
CTTTTTGGGCCGACCTATCCAGGAACATATGACAAGGACAGAGGAGTTTACACTTTATTT
TATCCAGGATTGTCGTTTGCTTTTCCAATTCCCTCCCAGTATACAGATTGCTGTCGTGAT
GGTGAAGCGGAACTACCTCTTGAGTTTCCAGATGGCACAACCCCAGTTACTTGCCGTGTA
TCAATATTTGATAGTTCTGCTGGAAGTAAAGTTGGTGTTGGATCCATGATGGACAAGGCC
TGTACTCCTCCTCTGCCTGCTGGGAGCCTCTACATGGAAGAAGTGCATGTTAAGCTGGGG
GAAGAATTACGGTTTAGTATTGGTGGACAACACATCCCCTTTGGTGCATCACCACAGGAT
GTTTGGACCGAATTAGGTCGACCATGTGGAATCCATCAGAAACAGGTTGATCAAATGGTG
ATTCATTCTGCTTCAGATCCCCGGCCGAGGACAACTCTTTGTGGTGATTACTTCTACAAC
TACTTTACTCGTGGCTTAGATATACTATTTGATGGGCAGACACATAAAATCAAGAAATTT
GTCTTGCACACCAACTATCCTGGGCATGCTGATTTTAATTCATACATGAAGTGCAATTTT
GTTATCCATTGTTCTGATTTTGTAGGGTCTTATCATCAGGATGTAAACTCCTCTAAAGCT
ACTATTACAGCCAGCACAAAATGGGAACAAGTTAAGGAGATACTAGGGGATTGTGGTCGA
GCTGCTATCCAGACGCAAGGCTCTGCGAGTAATCCGTTTGGATCCACCTTTGTATATGGC
TACCAAAATCTTGCCTTTGAGGTGATGAAGAATGGTTACCTTGCGACTGTAACTCTCTTC
CAGTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006332
PEP Infomation

pacid=37424691 transcript=PGSC0003DMT400009125 locus=PGSC0003DMG400003547 ID=PGSC0003DMT400009125.v4.03 annot-version=v4.03
Sequence

MQRPRRRCEGTAMGSIVLDLRPGVGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYYDEE
PLKLDIVISFPDHGFHLRFDSWSQRLRLIEIFDVKRLQMRYATSVIGGPSTLATFVAVYS
LFGPTYPGTYDKDRGVYTLFYPGLSFAFPIPSQYTDCCRDGEAELPLEFPDGTTPVTCRV
SIFDSSAGSKVGVGSMMDKACTPPLPAGSLYMEEVHVKLGEELRFSIGGQHIPFGASPQD
VWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKF
VLHTNYPGHADFNSYMKCNFVIHCSDFVGSYHQDVNSSKATITASTKWEQVKEILGDCGR
AAIQTQGSASNPFGSTFVYGYQNLAFEVMKNGYLATVTLFQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400009125
Transcript Infomation

pacid=37424691 locus=PGSC0003DMG400003547 ID=PGSC0003DMT400009125.v4.03 annot-version=v4.03
Sequence

ATGCAGAGACCAAGACGCCGCTGCGAAGGCACTGCCATGGGTTCTATTGTTCTCGATCTC
CGCCCTGGTGTTGGAATCGGTCCTTTTACTCTAGGAATGCCTATTTGTGAAGCTTTCGCG
CAGATAGAGCAGCAGCCTAATATTTATGACGTTGTCCATGTTAAGTATTACGACGAGGAG
CCCTTAAAACTTGACATTGTCATTAGCTTCCCAGATCATGGATTTCATTTGCGGTTTGAT
TCCTGGTCACAGAGACTGCGCCTTATTGAAATATTTGATGTAAAACGGCTTCAGATGCGC
TATGCCACCTCTGTTATAGGCGGGCCGTCCACTTTAGCCACTTTTGTAGCCGTCTATTCT
CTTTTTGGGCCGACCTATCCAGGAACATATGACAAGGACAGAGGAGTTTACACTTTATTT
TATCCAGGATTGTCGTTTGCTTTTCCAATTCCCTCCCAGTATACAGATTGCTGTCGTGAT
GGTGAAGCGGAACTACCTCTTGAGTTTCCAGATGGCACAACCCCAGTTACTTGCCGTGTA
TCAATATTTGATAGTTCTGCTGGAAGTAAAGTTGGTGTTGGATCCATGATGGACAAGGCC
TGTACTCCTCCTCTGCCTGCTGGGAGCCTCTACATGGAAGAAGTGCATGTTAAGCTGGGG
GAAGAATTACGGTTTAGTATTGGTGGACAACACATCCCCTTTGGTGCATCACCACAGGAT
GTTTGGACCGAATTAGGTCGACCATGTGGAATCCATCAGAAACAGGTTGATCAAATGGTG
ATTCATTCTGCTTCAGATCCCCGGCCGAGGACAACTCTTTGTGGTGATTACTTCTACAAC
TACTTTACTCGTGGCTTAGATATACTATTTGATGGGCAGACACATAAAATCAAGAAATTT
GTCTTGCACACCAACTATCCTGGGCATGCTGATTTTAATTCATACATGAAGTGCAATTTT
GTTATCCATTGTTCTGATTTTGTAGGGTCTTATCATCAGGATGTAAACTCCTCTAAAGCT
ACTATTACAGCCAGCACAAAATGGGAACAAGTTAAGGAGATACTAGGGGATTGTGGTCGA
GCTGCTATCCAGACGCAAGGCTCTGCGAGTAATCCGTTTGGATCCACCTTTGTATATGGC
TACCAAAATCTTGCCTTTGAGGTGATGAAGAATGGTTACCTTGCGACTGTAACTCTCTTC
CAGTCCTGA