Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009104
CDS Infomation

pacid=37425112 polypeptide=PGSC0003DMP400006316 locus=PGSC0003DMG400003539 ID=PGSC0003DMT400009104.v4.03 annot-version=v4.03
Sequence

ATGAGGAAACGCGATTTAGCTATTCTGATGCTATCTGCTTTCGCTATTTTCTTCTCTCTT
CAGCACGAAGGTGACTTATCGTTCAAGGAGGCATGGTATCATCTTTTCGAAGAGTATCCC
ATCAAATACGAGGCTGAGCGTCTTCCTCCCCCAATTGTTGCCGATCTCAACGGTGATGGA
AAGAAAGAGGTCCTTGTCGCCACTCATGATGCCAAAATTCAGGTTTTGGAACCACATTCT
AGGCGTGTTGATGAAGGTTTCAGTGAAGCACGTTTACTCGCGGAGGTGTCCCTCTTGCCT
GACAAAATTCGTATTGTCTCAGGAAGACGAGCGGTGGCGATGGCCACTGGTGTGATAGAT
AGGAACTATAATCACAGGGAGCCTCGGAAACAGGTCCTAGTTGTTGTTACCTCAGGTTGG
TCTGTGATGTGTTTCGATCACAATCTCAAAAAGCTATGGGAGGTCAACTTGCAGGAAAAT
TTTCCACATAATGCTCATCACAGGGAGATAGCAATTTCCATAAGTAATTATACTGTAAAG
CACGGAGATTCAGGCTTGGTGATTGTTGGCGGACGGATGGAAATGCAGCCTCATATGCAT
ATTGATCCATTTGAAGAGATTGAAATGGCTGAGAAAAGTGCAGAGCAGCATAGAAGAAGT
GCTGCTGAGAAGGAGGCGTCTGAGAATTCAGGAGTTGTGGATTTACGCCATTTTGCCCTT
TATGCACTTGCTGGTCGGACCGGCCAACTACGTTGGAGCAGGAAGATAGAGAATATTCAA
TCGCCATCTTCTGATGAATCTCTTTTGATTCCACAACATAATTACAAACTTGATGCTCAT
GCTTTGAACAGTCGTCAACCTGGGGAGTTCGAATGTCGGGAATTTAGAGAATCTATTCTT
GGAGTTATGCCACATAACTGGGATCGGCGAGAAGACACCAGATTAAAGTTGGCACATTTC
AGGCGACACAAAAGGAAGGCGGTTAAGAAAGTACCTGGGAAGTCCATTACTTACCCTTTC
CAGAAGCCTGAGGAAAAGCATCCTCCTGGGAAGGACACTACCAAAAGAATCTCAAATGCT
ATAGGAAAGGCAGTAAATTATGCAAAATCGGCAAAACCCAAAAAGCCTTCGCCCTATATA
CCTACTATTACCAATTATACCCAGCTTTGGTGGGTCCCTAACGTTGTCGTGGCTCATGAG
AAGGAAGGGATTGAAGCTGTTCATATAGCAACAGGACGTACTGTGTGCAAGCTTCACCTC
CTAGAAGGCGGGCTTCATGCAGATATTAATGGCGATGGAGTGTTGGACCATGTCCAGGTT
GTGGGGGCCAATGGTGCTGAACAGACTGTTGTTAGTGGATCAATGGAGGTGCTGCGTCCC
TGTTGGGCTGTTGCCACCTCTGGTGTTCCAGTGCGAGAACAGCTTTTCAATGCTTCTATT
TGTCGTCATTCTCCTTTTAACTTATTCCAGGCTGGTGAATTCTCCAGAGGATTTGGTCAC
ACTTTTGATGCAAGTTCACTGGAGGTAGCAACGCCTATCCTCATCCCCAGAAATGATGGC
CATCGACATCGTAAGGGAAGCCATGGAGATGTTGTATTCTTGACAAATCGTGGCGAGGTA
ACATCGTATTCACCGGGCTTGCATGGACATGGTGCTCTGTGGAATTGGCAGGTATTGACG
GGTGCCACATGGTCAAACCTTCAATCGCCAGCGGGGATGATGGAAGCTGGTAAAGTAGTC
CCAACCCTGAAGGCATTTTCTCTACGGGTGCATGACAGTCAAGAATTGATCCTTGCAGCA
GGAGACCAAGAAGCTGTAATATTATCTCCTGGAGGGAGTATGTTGACTACTATTGACCTC
CCTGCACCTCCCACTCATGCTTTGGTGTCCGAAGACTTCTCAAATGATGGATTAACTGAT
CTTATCCTTGTCACATCAAGTGGAGTTTATGGCTTCGTTCAAACTAGGCAACCTGGTGCA
CTCTTCTTTAGCACACTGGTTGGCTGCCTTATAATTGTAATGGGAGTGCTCTTTGTCTCA
CAGTATCTAAATTCTACAAAGGGAAAACCTAGAGCATCTTCTGGTCAGTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006316
PEP Infomation

pacid=37425112 transcript=PGSC0003DMT400009104 locus=PGSC0003DMG400003539 ID=PGSC0003DMT400009104.v4.03 annot-version=v4.03
Sequence

MRKRDLAILMLSAFAIFFSLQHEGDLSFKEAWYHLFEEYPIKYEAERLPPPIVADLNGDG
KKEVLVATHDAKIQVLEPHSRRVDEGFSEARLLAEVSLLPDKIRIVSGRRAVAMATGVID
RNYNHREPRKQVLVVVTSGWSVMCFDHNLKKLWEVNLQENFPHNAHHREIAISISNYTVK
HGDSGLVIVGGRMEMQPHMHIDPFEEIEMAEKSAEQHRRSAAEKEASENSGVVDLRHFAL
YALAGRTGQLRWSRKIENIQSPSSDESLLIPQHNYKLDAHALNSRQPGEFECREFRESIL
GVMPHNWDRREDTRLKLAHFRRHKRKAVKKVPGKSITYPFQKPEEKHPPGKDTTKRISNA
IGKAVNYAKSAKPKKPSPYIPTITNYTQLWWVPNVVVAHEKEGIEAVHIATGRTVCKLHL
LEGGLHADINGDGVLDHVQVVGANGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI
CRHSPFNLFQAGEFSRGFGHTFDASSLEVATPILIPRNDGHRHRKGSHGDVVFLTNRGEV
TSYSPGLHGHGALWNWQVLTGATWSNLQSPAGMMEAGKVVPTLKAFSLRVHDSQELILAA
GDQEAVILSPGGSMLTTIDLPAPPTHALVSEDFSNDGLTDLILVTSSGVYGFVQTRQPGA
LFFSTLVGCLIIVMGVLFVSQYLNSTKGKPRASSGQW*

Transcript Sequence

Transcript ID

PGSC0003DMT400009104
Transcript Infomation

pacid=37425112 locus=PGSC0003DMG400003539 ID=PGSC0003DMT400009104.v4.03 annot-version=v4.03
Sequence

ATGAGGAAACGCGATTTAGCTATTCTGATGCTATCTGCTTTCGCTATTTTCTTCTCTCTT
CAGCACGAAGGTGACTTATCGTTCAAGGAGGCATGGTATCATCTTTTCGAAGAGTATCCC
ATCAAATACGAGGCTGAGCGTCTTCCTCCCCCAATTGTTGCCGATCTCAACGGTGATGGA
AAGAAAGAGGTCCTTGTCGCCACTCATGATGCCAAAATTCAGGTTTTGGAACCACATTCT
AGGCGTGTTGATGAAGGTTTCAGTGAAGCACGTTTACTCGCGGAGGTGTCCCTCTTGCCT
GACAAAATTCGTATTGTCTCAGGAAGACGAGCGGTGGCGATGGCCACTGGTGTGATAGAT
AGGAACTATAATCACAGGGAGCCTCGGAAACAGGTCCTAGTTGTTGTTACCTCAGGTTGG
TCTGTGATGTGTTTCGATCACAATCTCAAAAAGCTATGGGAGGTCAACTTGCAGGAAAAT
TTTCCACATAATGCTCATCACAGGGAGATAGCAATTTCCATAAGTAATTATACTGTAAAG
CACGGAGATTCAGGCTTGGTGATTGTTGGCGGACGGATGGAAATGCAGCCTCATATGCAT
ATTGATCCATTTGAAGAGATTGAAATGGCTGAGAAAAGTGCAGAGCAGCATAGAAGAAGT
GCTGCTGAGAAGGAGGCGTCTGAGAATTCAGGAGTTGTGGATTTACGCCATTTTGCCCTT
TATGCACTTGCTGGTCGGACCGGCCAACTACGTTGGAGCAGGAAGATAGAGAATATTCAA
TCGCCATCTTCTGATGAATCTCTTTTGATTCCACAACATAATTACAAACTTGATGCTCAT
GCTTTGAACAGTCGTCAACCTGGGGAGTTCGAATGTCGGGAATTTAGAGAATCTATTCTT
GGAGTTATGCCACATAACTGGGATCGGCGAGAAGACACCAGATTAAAGTTGGCACATTTC
AGGCGACACAAAAGGAAGGCGGTTAAGAAAGTACCTGGGAAGTCCATTACTTACCCTTTC
CAGAAGCCTGAGGAAAAGCATCCTCCTGGGAAGGACACTACCAAAAGAATCTCAAATGCT
ATAGGAAAGGCAGTAAATTATGCAAAATCGGCAAAACCCAAAAAGCCTTCGCCCTATATA
CCTACTATTACCAATTATACCCAGCTTTGGTGGGTCCCTAACGTTGTCGTGGCTCATGAG
AAGGAAGGGATTGAAGCTGTTCATATAGCAACAGGACGTACTGTGTGCAAGCTTCACCTC
CTAGAAGGCGGGCTTCATGCAGATATTAATGGCGATGGAGTGTTGGACCATGTCCAGGTT
GTGGGGGCCAATGGTGCTGAACAGACTGTTGTTAGTGGATCAATGGAGGTGCTGCGTCCC
TGTTGGGCTGTTGCCACCTCTGGTGTTCCAGTGCGAGAACAGCTTTTCAATGCTTCTATT
TGTCGTCATTCTCCTTTTAACTTATTCCAGGCTGGTGAATTCTCCAGAGGATTTGGTCAC
ACTTTTGATGCAAGTTCACTGGAGGTAGCAACGCCTATCCTCATCCCCAGAAATGATGGC
CATCGACATCGTAAGGGAAGCCATGGAGATGTTGTATTCTTGACAAATCGTGGCGAGGTA
ACATCGTATTCACCGGGCTTGCATGGACATGGTGCTCTGTGGAATTGGCAGGTATTGACG
GGTGCCACATGGTCAAACCTTCAATCGCCAGCGGGGATGATGGAAGCTGGTAAAGTAGTC
CCAACCCTGAAGGCATTTTCTCTACGGGTGCATGACAGTCAAGAATTGATCCTTGCAGCA
GGAGACCAAGAAGCTGTAATATTATCTCCTGGAGGGAGTATGTTGACTACTATTGACCTC
CCTGCACCTCCCACTCATGCTTTGGTGTCCGAAGACTTCTCAAATGATGGATTAACTGAT
CTTATCCTTGTCACATCAAGTGGAGTTTATGGCTTCGTTCAAACTAGGCAACCTGGTGCA
CTCTTCTTTAGCACACTGGTTGGCTGCCTTATAATTGTAATGGGAGTGCTCTTTGTCTCA
CAGTATCTAAATTCTACAAAGGGAAAACCTAGAGCATCTTCTGGTCAGTGGTGA