Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009093
CDS Infomation

pacid=37428132 polypeptide=PGSC0003DMP400006309 locus=PGSC0003DMG400003535 ID=PGSC0003DMT400009093.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCTCTATCTTCTCTATCAACCATGTTGAGCCAACCTCACTGTGCCGTGCGC
ATCAAATTCCCTAAACAATATTCGGTCAGATTCCTTTCTTCGAAGCTTCTAGAAGTTCAA
TCAACCTCCTGCCGCCTACGCCGCCGCACGTCAGTTTCTCTTCGGAGGAGTTCTACATTC
TCTATCAAGATATCCAGGAATTTCTCGCAGTGTCACTCACGCACTTCTTTAACCAGCAAG
GACCAAATTCCAACCCTCCGCGACTTCATACCCAAAGCTACTCAGACTGTTCCTACTTCC
GATGTTCAGCAGGAGCCTGTGATGATATCTGATGTTATCCCTAGAGGACGCATCTATCAT
GAAACTTATGGATGTCAAATGAATGTCAATGATATGGAGATTGTTTTATCCATCATGAAA
AATGCTGGATACACTGAAAGTGTGGAAGTCCCAGAAAATGCTGAGATAATATTTATAAAT
ACTTGTGCTATAAGGGACAATGCAGAACTTAAGGTTTGGCAGAGGCTCAATTATTTTTGG
TTTCTTAAGAGGCAATGGAAGAGCAATGTTGCCTCTGGAAGGTCACAGTCTGCACATCCC
CCAAAAGTAGTTGTGCTGGGGTGTATGGCTGAGAGGTTGAAGGACAAAATATTGGATGCA
GATAAGATGGTTGACGTAGTTTGTGGACCTGATGCTTATCGAGACTTACCACGCCTGTTG
GAAGAAGTGGACTATGGTCAAAAAGGTATCAATACTCTACTTTCACTTGAAGAAACCTAC
GCGGATATTAATCCAGTCCGGATCTCCAAAAATTCTATATCTGCATTTGTATCTGTGATG
AGGGGTTGCAATAATATGTGTTCATTCTGCATTGTCCCCTTCACTAGAGGGAGAGAACGG
TCTCGCCCAGTGGAATCAATTGTGAAAGAGGTCGCTGAACTTTGGAAAGAGGGAGTCAAA
GAGGTCACGCTTCTTGGCCAAAATGTAAATAGCTATAATGATACATCTGGAGTTGAAAAT
CCGGATGAACCAGCAGTCAGTTGGGAACTTAGTGATGGATTCTCCAGCATGTGTAAAGTA
AAACATGTGGGTCTACGGTTTGCTGATCTCCTAGATAGACTTGCCATTGAATTTCCTGAA
ATGCGGTTCAGATACACTTCCCCACATCCTAAAGATTTTCCAGATGATTTGTTGTATGTA
ATGCGGGACAGGTACAATATCTGCAAAAGCATTCATCTGCCAGCACAGTCAGGCAGCAGT
GCAGTGCTTGAAAGAATGCGTCGTGGATACACTCGCGAAGTATATTTAGATCTTGTGAAG
AAGATAAGGGATATAATACCGGAAATGGGCATAAGCAGCGACTTCATATGTGGTTTCTGT
GGAGAAACGGAAGAGGATCACGAAGACACACTAAGCCTTGTAAAGACTGTCTGTTATGAT
ATGGCATACATGTTTGCTTACAGCATGAGAGAGAAAACACATGCACAGAGAAAATATGTT
GATGATGTTCCTGAAGATGTGAAGCAGAGGAGGCTCACAGAACTAATAGAAGCTTTTCGC
GGGAGTACAGGTCAGTGCTATGACGCTAAAATTGGCACAATCCAACTTGTGCTAGTTGAA
GGGCCAAATAAGAGAGCCCCCGACACAGAGTTAATTGGTAAGAGTGATAGAGGCCATAGG
GTATCATTTACGAACCTGCCTATCCCAGATAAGGTTGATAATAATGGAAAGCGCAATCCA
AAGGTTGGTGATTATGTTGAAGTACACATAACAAAATCCACAAGGGCATCACTGTTTGGA
GAAGCACTTGCTATAACCAAATTAAGCTCATTTTATAACACTTTACATGAAGAAGCTGTT
GCCTTTGCCAGCAGAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006309
PEP Infomation

pacid=37428132 transcript=PGSC0003DMT400009093 locus=PGSC0003DMG400003535 ID=PGSC0003DMT400009093.v4.03 annot-version=v4.03
Sequence

MASSLSSLSTMLSQPHCAVRIKFPKQYSVRFLSSKLLEVQSTSCRLRRRTSVSLRRSSTF
SIKISRNFSQCHSRTSLTSKDQIPTLRDFIPKATQTVPTSDVQQEPVMISDVIPRGRIYH
ETYGCQMNVNDMEIVLSIMKNAGYTESVEVPENAEIIFINTCAIRDNAELKVWQRLNYFW
FLKRQWKSNVASGRSQSAHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL
EEVDYGQKGINTLLSLEETYADINPVRISKNSISAFVSVMRGCNNMCSFCIVPFTRGRER
SRPVESIVKEVAELWKEGVKEVTLLGQNVNSYNDTSGVENPDEPAVSWELSDGFSSMCKV
KHVGLRFADLLDRLAIEFPEMRFRYTSPHPKDFPDDLLYVMRDRYNICKSIHLPAQSGSS
AVLERMRRGYTREVYLDLVKKIRDIIPEMGISSDFICGFCGETEEDHEDTLSLVKTVCYD
MAYMFAYSMREKTHAQRKYVDDVPEDVKQRRLTELIEAFRGSTGQCYDAKIGTIQLVLVE
GPNKRAPDTELIGKSDRGHRVSFTNLPIPDKVDNNGKRNPKVGDYVEVHITKSTRASLFG
EALAITKLSSFYNTLHEEAVAFASRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400009093
Transcript Infomation

pacid=37428132 locus=PGSC0003DMG400003535 ID=PGSC0003DMT400009093.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCTCTATCTTCTCTATCAACCATGTTGAGCCAACCTCACTGTGCCGTGCGC
ATCAAATTCCCTAAACAATATTCGGTCAGATTCCTTTCTTCGAAGCTTCTAGAAGTTCAA
TCAACCTCCTGCCGCCTACGCCGCCGCACGTCAGTTTCTCTTCGGAGGAGTTCTACATTC
TCTATCAAGATATCCAGGAATTTCTCGCAGTGTCACTCACGCACTTCTTTAACCAGCAAG
GACCAAATTCCAACCCTCCGCGACTTCATACCCAAAGCTACTCAGACTGTTCCTACTTCC
GATGTTCAGCAGGAGCCTGTGATGATATCTGATGTTATCCCTAGAGGACGCATCTATCAT
GAAACTTATGGATGTCAAATGAATGTCAATGATATGGAGATTGTTTTATCCATCATGAAA
AATGCTGGATACACTGAAAGTGTGGAAGTCCCAGAAAATGCTGAGATAATATTTATAAAT
ACTTGTGCTATAAGGGACAATGCAGAACTTAAGGTTTGGCAGAGGCTCAATTATTTTTGG
TTTCTTAAGAGGCAATGGAAGAGCAATGTTGCCTCTGGAAGGTCACAGTCTGCACATCCC
CCAAAAGTAGTTGTGCTGGGGTGTATGGCTGAGAGGTTGAAGGACAAAATATTGGATGCA
GATAAGATGGTTGACGTAGTTTGTGGACCTGATGCTTATCGAGACTTACCACGCCTGTTG
GAAGAAGTGGACTATGGTCAAAAAGGTATCAATACTCTACTTTCACTTGAAGAAACCTAC
GCGGATATTAATCCAGTCCGGATCTCCAAAAATTCTATATCTGCATTTGTATCTGTGATG
AGGGGTTGCAATAATATGTGTTCATTCTGCATTGTCCCCTTCACTAGAGGGAGAGAACGG
TCTCGCCCAGTGGAATCAATTGTGAAAGAGGTCGCTGAACTTTGGAAAGAGGGAGTCAAA
GAGGTCACGCTTCTTGGCCAAAATGTAAATAGCTATAATGATACATCTGGAGTTGAAAAT
CCGGATGAACCAGCAGTCAGTTGGGAACTTAGTGATGGATTCTCCAGCATGTGTAAAGTA
AAACATGTGGGTCTACGGTTTGCTGATCTCCTAGATAGACTTGCCATTGAATTTCCTGAA
ATGCGGTTCAGATACACTTCCCCACATCCTAAAGATTTTCCAGATGATTTGTTGTATGTA
ATGCGGGACAGGTACAATATCTGCAAAAGCATTCATCTGCCAGCACAGTCAGGCAGCAGT
GCAGTGCTTGAAAGAATGCGTCGTGGATACACTCGCGAAGTATATTTAGATCTTGTGAAG
AAGATAAGGGATATAATACCGGAAATGGGCATAAGCAGCGACTTCATATGTGGTTTCTGT
GGAGAAACGGAAGAGGATCACGAAGACACACTAAGCCTTGTAAAGACTGTCTGTTATGAT
ATGGCATACATGTTTGCTTACAGCATGAGAGAGAAAACACATGCACAGAGAAAATATGTT
GATGATGTTCCTGAAGATGTGAAGCAGAGGAGGCTCACAGAACTAATAGAAGCTTTTCGC
GGGAGTACAGGTCAGTGCTATGACGCTAAAATTGGCACAATCCAACTTGTGCTAGTTGAA
GGGCCAAATAAGAGAGCCCCCGACACAGAGTTAATTGGTAAGAGTGATAGAGGCCATAGG
GTATCATTTACGAACCTGCCTATCCCAGATAAGGTTGATAATAATGGAAAGCGCAATCCA
AAGGTTGGTGATTATGTTGAAGTACACATAACAAAATCCACAAGGGCATCACTGTTTGGA
GAAGCACTTGCTATAACCAAATTAAGCTCATTTTATAACACTTTACATGAAGAAGCTGTT
GCCTTTGCCAGCAGAACTTAA