Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009065
CDS Infomation

pacid=37424211 polypeptide=PGSC0003DMP400006282 locus=PGSC0003DMG400003527 ID=PGSC0003DMT400009065.v4.03 annot-version=v4.03
Sequence

ATGGTGGATGCAGTGGTAACTGTATTCTTGGAGAAACTTCTAAATGTTCTCACTGAGGAA
AGCAGATTTCTAAGTCAACACAGACAACAGTTTGAAAAACTGAAGAATGAACTGTTATTC
ATGCAAAGCTTTCTCAAGGATGCAGAGAGGCTCAAGAGGAAACACACCACTCTTAAAACG
GTCATGGCCTGTTTGAGAGACTTAATCTTTGAAGCTGAAGAGATACTGGAGGACTGCCAG
AATCAATCAGCAGATAGTGATGGGTCTAATAGATTCTCTACGCGCTTACATCCCAAAAGG
CTATCTCATCGCCATCAAACTGGGAAGCGACTTGCTGAAATCAATGACAAGATCTCGGAA
ATAAAGCAAAACATTTCGACATACCTTAGAGTGCCACTTATGAATGAAGGAAGTATGGAG
GCACACGATAATCTAATGACAAGATGGACTTCTTCCCTTTATGACCACACTCAGGTAGTT
GGTTTGGAAGGTGACACAGAGAAGATAAAGGATTGGCTATTTGAAGCAAGTGATGGTTTA
CTTGCCATTGCATTTGTGGGTATGGGAGGGCTCGGGAAAACCACTCTTGCTCAGAAAGTC
TTCAATGAAAGAAGCATGGAGAATCACTTTGAGAGGAGAATTTGGGTGTCTGTTTCTCAA
ACATTTACTGAGGAACAAGTCATGAGAAGCATATTAAAGAGTTTGGGAGATGCATGCATT
GGTGACGACCAGAGTGAATTGTTAAGAAAAATAAATCAGTACCTTTTAGGAAAGAGGTTT
TTGATTGTCATGGATGATGTTTGGAGCTTGGACAATGCTTGGTGGCAGAAAATCTATTCT
GGACTACCCAAAGGTAATGGGAGCAGTGTTATTGTAACTACGAGAAATGAGTTAGTTGCT
CGCAAGATGGGAGTCACAGAAGCAAGGACACACTGGCCAAAGTTCCTCAATGAGCACTAC
AGTTGGTTACTGTTCCGGAAGATTGCATTTGCAGCAACTGCAGGTGAATGCAATTTTCCT
GATTTGGAGGATGTGGGAAAGGAGATTGTGGAAAAATGCAAGGGTCTTCCATTAGCAATC
AAAGCAGTAGGAGGAGTGATGCTTTGTAAACCACCTTACTATCATGAATGGGTGCGTATT
GCAAATCATTTCCGCGATGAATTGAAAGAAAATGATGACTCAGTGATGGCTTCATTACAG
TTGAGCTATGATGAACTCCCTCCATACTTAAAATCCTGTTTCCTTTGTTTTTCACTCTTT
CCTGAGGATTGTGTCATACTTAAAGACCAGCTGATCCGTTGGTGGATCGGAGAAAGTTTC
ATCCCTCTGAGAAGTGGTAGGTTATCAACTGAAGTTGGAGAAGATTGTTTCTCGCAACTA
TCCAATCGATGTTTGATAGAAGTTGTTGATAAGGCTTACAATGGTGTGATCCATACTTGC
AAAATGCATGATATGGTTCGTGATTTGGTGATCAAAATTGCGGACGATGATTCATTTTCC
ACCCCATCTGATGCAAATTGTCGGCATTTGGGTATTAGTAGTGCGATGAATGGGAAGAAA
CTACTGAGCAATCGAAAATTACGAGCACTGCTGACAAACACCAAGAGTGGTGAAGTAAAC
AAAATCCCTTCTGATATTGCCAAGAAGTTCTGCAATAGTCGACATCTTCAGGTACTGGAT
CTGTCGAAATCAATTTTCAATGTGCCTCTTTCAAGTTTGCTGGAAGGCATTGGATCTGCC
AAACAGCTTACTTATCTCAGTCTAAGCAATACACACCCGTTGATTGGTGTTCCAGATTCC
ATATCCAATCTTGAAAAATTACAGATTTTGGACTTCAGCTATTGCCAGAATATGAAAATG
CTCCCCTCTTGCGTTTTAACATTTGTGGAACTAGCTGTTTTAGATTTGAACCACTGTGGG
TCACTTGAGTACCTGCCAAAAGGATTGAGTAGGCTTTCCAATCTTCAAGTACTGCTTGGA
TTTAAGCCTGCAAAATTAAGCCAGCCTGGAGGTTGTCGTATTTCTGAACTCAGAAGCCTT
ACTCGACTGAGAAGGCTCAGTTTAAGACTAACTCAGGATGAGGAGATTGGCGATGATGAG
GGGAACGCACTCATAGGTCTCCAAGAACTTCAATTTTTGACAATAAGTTGCTTTGACAGT
CAAGATGATGGACTAGTCACAAAACTTGGTAAACTTTATCCCCCTCGACAACTCCACGAG
CTGATTCTCAAATTCTATCCAGGTAAAGTAAGTCCTGAATGGCTTAACCCCAAATCTCTC
CCCATGTTGCGATATATGTCAATTATTTCAGGTGATATGAAAGAAATGCACGAGAACTTC
TGGGGTGATCGCAGTACTGTTTGGAAAATTGAGGGGTTAATGTTGGAAGCTTTAACTGAT
TTGAGATTGGAGTGGTCAGCAGTGAATCGAGTGATGCCTTCGTTAAGAATACTCAAGGCT
AGCTGGTGCCCCGAGTTAGAGGCATTTCCAATTGAAGATGCAGGATTCAGAGGGGGGTTA
TGGAAGAAGGAAGAACATAGGTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006282
PEP Infomation

pacid=37424211 transcript=PGSC0003DMT400009065 locus=PGSC0003DMG400003527 ID=PGSC0003DMT400009065.v4.03 annot-version=v4.03
Sequence

MVDAVVTVFLEKLLNVLTEESRFLSQHRQQFEKLKNELLFMQSFLKDAERLKRKHTTLKT
VMACLRDLIFEAEEILEDCQNQSADSDGSNRFSTRLHPKRLSHRHQTGKRLAEINDKISE
IKQNISTYLRVPLMNEGSMEAHDNLMTRWTSSLYDHTQVVGLEGDTEKIKDWLFEASDGL
LAIAFVGMGGLGKTTLAQKVFNERSMENHFERRIWVSVSQTFTEEQVMRSILKSLGDACI
GDDQSELLRKINQYLLGKRFLIVMDDVWSLDNAWWQKIYSGLPKGNGSSVIVTTRNELVA
RKMGVTEARTHWPKFLNEHYSWLLFRKIAFAATAGECNFPDLEDVGKEIVEKCKGLPLAI
KAVGGVMLCKPPYYHEWVRIANHFRDELKENDDSVMASLQLSYDELPPYLKSCFLCFSLF
PEDCVILKDQLIRWWIGESFIPLRSGRLSTEVGEDCFSQLSNRCLIEVVDKAYNGVIHTC
KMHDMVRDLVIKIADDDSFSTPSDANCRHLGISSAMNGKKLLSNRKLRALLTNTKSGEVN
KIPSDIAKKFCNSRHLQVLDLSKSIFNVPLSSLLEGIGSAKQLTYLSLSNTHPLIGVPDS
ISNLEKLQILDFSYCQNMKMLPSCVLTFVELAVLDLNHCGSLEYLPKGLSRLSNLQVLLG
FKPAKLSQPGGCRISELRSLTRLRRLSLRLTQDEEIGDDEGNALIGLQELQFLTISCFDS
QDDGLVTKLGKLYPPRQLHELILKFYPGKVSPEWLNPKSLPMLRYMSIISGDMKEMHENF
WGDRSTVWKIEGLMLEALTDLRLEWSAVNRVMPSLRILKASWCPELEAFPIEDAGFRGGL
WKKEEHRC*

Transcript Sequence

Transcript ID

PGSC0003DMT400009065
Transcript Infomation

pacid=37424211 locus=PGSC0003DMG400003527 ID=PGSC0003DMT400009065.v4.03 annot-version=v4.03
Sequence

ATGGTGGATGCAGTGGTAACTGTATTCTTGGAGAAACTTCTAAATGTTCTCACTGAGGAA
AGCAGATTTCTAAGTCAACACAGACAACAGTTTGAAAAACTGAAGAATGAACTGTTATTC
ATGCAAAGCTTTCTCAAGGATGCAGAGAGGCTCAAGAGGAAACACACCACTCTTAAAACG
GTCATGGCCTGTTTGAGAGACTTAATCTTTGAAGCTGAAGAGATACTGGAGGACTGCCAG
AATCAATCAGCAGATAGTGATGGGTCTAATAGATTCTCTACGCGCTTACATCCCAAAAGG
CTATCTCATCGCCATCAAACTGGGAAGCGACTTGCTGAAATCAATGACAAGATCTCGGAA
ATAAAGCAAAACATTTCGACATACCTTAGAGTGCCACTTATGAATGAAGGAAGTATGGAG
GCACACGATAATCTAATGACAAGATGGACTTCTTCCCTTTATGACCACACTCAGGTAGTT
GGTTTGGAAGGTGACACAGAGAAGATAAAGGATTGGCTATTTGAAGCAAGTGATGGTTTA
CTTGCCATTGCATTTGTGGGTATGGGAGGGCTCGGGAAAACCACTCTTGCTCAGAAAGTC
TTCAATGAAAGAAGCATGGAGAATCACTTTGAGAGGAGAATTTGGGTGTCTGTTTCTCAA
ACATTTACTGAGGAACAAGTCATGAGAAGCATATTAAAGAGTTTGGGAGATGCATGCATT
GGTGACGACCAGAGTGAATTGTTAAGAAAAATAAATCAGTACCTTTTAGGAAAGAGGTTT
TTGATTGTCATGGATGATGTTTGGAGCTTGGACAATGCTTGGTGGCAGAAAATCTATTCT
GGACTACCCAAAGGTAATGGGAGCAGTGTTATTGTAACTACGAGAAATGAGTTAGTTGCT
CGCAAGATGGGAGTCACAGAAGCAAGGACACACTGGCCAAAGTTCCTCAATGAGCACTAC
AGTTGGTTACTGTTCCGGAAGATTGCATTTGCAGCAACTGCAGGTGAATGCAATTTTCCT
GATTTGGAGGATGTGGGAAAGGAGATTGTGGAAAAATGCAAGGGTCTTCCATTAGCAATC
AAAGCAGTAGGAGGAGTGATGCTTTGTAAACCACCTTACTATCATGAATGGGTGCGTATT
GCAAATCATTTCCGCGATGAATTGAAAGAAAATGATGACTCAGTGATGGCTTCATTACAG
TTGAGCTATGATGAACTCCCTCCATACTTAAAATCCTGTTTCCTTTGTTTTTCACTCTTT
CCTGAGGATTGTGTCATACTTAAAGACCAGCTGATCCGTTGGTGGATCGGAGAAAGTTTC
ATCCCTCTGAGAAGTGGTAGGTTATCAACTGAAGTTGGAGAAGATTGTTTCTCGCAACTA
TCCAATCGATGTTTGATAGAAGTTGTTGATAAGGCTTACAATGGTGTGATCCATACTTGC
AAAATGCATGATATGGTTCGTGATTTGGTGATCAAAATTGCGGACGATGATTCATTTTCC
ACCCCATCTGATGCAAATTGTCGGCATTTGGGTATTAGTAGTGCGATGAATGGGAAGAAA
CTACTGAGCAATCGAAAATTACGAGCACTGCTGACAAACACCAAGAGTGGTGAAGTAAAC
AAAATCCCTTCTGATATTGCCAAGAAGTTCTGCAATAGTCGACATCTTCAGGTACTGGAT
CTGTCGAAATCAATTTTCAATGTGCCTCTTTCAAGTTTGCTGGAAGGCATTGGATCTGCC
AAACAGCTTACTTATCTCAGTCTAAGCAATACACACCCGTTGATTGGTGTTCCAGATTCC
ATATCCAATCTTGAAAAATTACAGATTTTGGACTTCAGCTATTGCCAGAATATGAAAATG
CTCCCCTCTTGCGTTTTAACATTTGTGGAACTAGCTGTTTTAGATTTGAACCACTGTGGG
TCACTTGAGTACCTGCCAAAAGGATTGAGTAGGCTTTCCAATCTTCAAGTACTGCTTGGA
TTTAAGCCTGCAAAATTAAGCCAGCCTGGAGGTTGTCGTATTTCTGAACTCAGAAGCCTT
ACTCGACTGAGAAGGCTCAGTTTAAGACTAACTCAGGATGAGGAGATTGGCGATGATGAG
GGGAACGCACTCATAGGTCTCCAAGAACTTCAATTTTTGACAATAAGTTGCTTTGACAGT
CAAGATGATGGACTAGTCACAAAACTTGGTAAACTTTATCCCCCTCGACAACTCCACGAG
CTGATTCTCAAATTCTATCCAGGTAAAGTAAGTCCTGAATGGCTTAACCCCAAATCTCTC
CCCATGTTGCGATATATGTCAATTATTTCAGGTGATATGAAAGAAATGCACGAGAACTTC
TGGGGTGATCGCAGTACTGTTTGGAAAATTGAGGGGTTAATGTTGGAAGCTTTAACTGAT
TTGAGATTGGAGTGGTCAGCAGTGAATCGAGTGATGCCTTCGTTAAGAATACTCAAGGCT
AGCTGGTGCCCCGAGTTAGAGGCATTTCCAATTGAAGATGCAGGATTCAGAGGGGGGTTA
TGGAAGAAGGAAGAACATAGGTGCTGA