Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009054
CDS Infomation

pacid=37425826 polypeptide=PGSC0003DMP400006273 locus=PGSC0003DMG400003520 ID=PGSC0003DMT400009054.v4.03 annot-version=v4.03
Sequence

ATGCCGACATATACAGCAATAGCTATGGGTAGATTAATAGAATCAGGGGGCTCGAAAACC
ACGACAACTTCCAAAAGCATTCATGAATCAAAGTTTGAGAGGCGGATCAACGTTCCTAGT
TCAAGTTTTGATAGAAACAAGAATGGTTCTAGTTTAAATCTAGAAAGGAAAATCATCCAG
ACTAATGTAAAGATGGATGATACCAATGGTAAGCCCTCGATAATAGGAGATAGAAAAGAC
CACTGGACTCAAATATCTCCTGCACTATACACAATTCCCAAGCCAACACCACTTCCAGAT
TCTCCTTCATTTCCAGATTCTCCTTCGTCATTTCCTCCATCGCCCTACATAATCAATCAC
AAGCGCCGAGGTCCACGCCTTTCACAAAGTTTCACCGAAGATGATTTTGGCACTCAACAA
CAAGCTCTTGATGGAGAGAAGATAGATGAGAAGTTAAGAGACACAAAGAAGGACCTCCCC
AGTACATCTGTTGATGACCCTTCTATTTCTAGGGAGACAGTTAACTGTGCGAAAGAGGAT
AATTTGTTATTCACTACTAATAACCTGGTTAAGGATGGTGAAGTGACTGACCTCTGTGAT
GGGGAGATTCTTCACCAAGATTTGCATAATGGTTCAGCTGGGCAAAATGGTACAATGAAG
TTTGTTGCATTCAATTTGCGGAGAGGGGGTGAAGCTGATGATTTCTTTGACCCACAGGAA
TCTCTGAGTGTCAGGAGTTTTGGTGAGAGTGAGAGTAATGGTGGATTCCAGCGCTGTTTA
AGTTCCATGACCCCGATGGGAGAATTTTATGATGCTTGGGAAGAACTATCTTCAGAGAAT
GGGCCACAGATACCTACAAATGATTTTGAAAATGAGCTACGAGAGATAAGATTGAGCTTA
TTAACGGAAATTGAAAAGCGAAAGCAAGTAGAAGAAGTTCTAACTAATATGCAAACCCAG
TGGCAGAGGATTCGTGAACGATTATCTCTCGTGGGGTTGAACTTTCCTCCTAATCCTGTT
GCTGGAGAGGAATTGGACAATGAACAACCAGATGATCAGGTGGAGGATTTGTGTCAACAA
GTCCACATCCTTCGGGTTGTATCAGAGTCCATTGGTAAGGGAATAGCAAAGGCTGAGTTG
GAGACAGAAATTGAGGCTCAAATTGAGTCAAAGAACTTTGAGATAGCTCGACTATGGGAC
AGGTTGAATTATTACGAAGCTGTGAATCGAGAGATGTCACAGAGGAATCAGGAAGCTATA
GAGACAGCGCGGCGTCTTAGGCAAATAAGGAAGAGAAAGCAGAAGAAATTGATATGGGGT
TCGATTGCTGCTACAATTACTATAGGCTCTGCTGTCTTAGCGTGGTCTTACTTTTCTACT
GGAAGGGAATCGTCTTCTTTGGATCAATCTCATAGTCTTGAGGGAGACTCTGCATCAGAA
CTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006273
PEP Infomation

pacid=37425826 transcript=PGSC0003DMT400009054 locus=PGSC0003DMG400003520 ID=PGSC0003DMT400009054.v4.03 annot-version=v4.03
Sequence

MPTYTAIAMGRLIESGGSKTTTTSKSIHESKFERRINVPSSSFDRNKNGSSLNLERKIIQ
TNVKMDDTNGKPSIIGDRKDHWTQISPALYTIPKPTPLPDSPSFPDSPSSFPPSPYIINH
KRRGPRLSQSFTEDDFGTQQQALDGEKIDEKLRDTKKDLPSTSVDDPSISRETVNCAKED
NLLFTTNNLVKDGEVTDLCDGEILHQDLHNGSAGQNGTMKFVAFNLRRGGEADDFFDPQE
SLSVRSFGESESNGGFQRCLSSMTPMGEFYDAWEELSSENGPQIPTNDFENELREIRLSL
LTEIEKRKQVEEVLTNMQTQWQRIRERLSLVGLNFPPNPVAGEELDNEQPDDQVEDLCQQ
VHILRVVSESIGKGIAKAELETEIEAQIESKNFEIARLWDRLNYYEAVNREMSQRNQEAI
ETARRLRQIRKRKQKKLIWGSIAATITIGSAVLAWSYFSTGRESSSLDQSHSLEGDSASE
L*

Transcript Sequence

Transcript ID

PGSC0003DMT400009054
Transcript Infomation

pacid=37425826 locus=PGSC0003DMG400003520 ID=PGSC0003DMT400009054.v4.03 annot-version=v4.03
Sequence

ATGCCGACATATACAGCAATAGCTATGGGTAGATTAATAGAATCAGGGGGCTCGAAAACC
ACGACAACTTCCAAAAGCATTCATGAATCAAAGTTTGAGAGGCGGATCAACGTTCCTAGT
TCAAGTTTTGATAGAAACAAGAATGGTTCTAGTTTAAATCTAGAAAGGAAAATCATCCAG
ACTAATGTAAAGATGGATGATACCAATGGTAAGCCCTCGATAATAGGAGATAGAAAAGAC
CACTGGACTCAAATATCTCCTGCACTATACACAATTCCCAAGCCAACACCACTTCCAGAT
TCTCCTTCATTTCCAGATTCTCCTTCGTCATTTCCTCCATCGCCCTACATAATCAATCAC
AAGCGCCGAGGTCCACGCCTTTCACAAAGTTTCACCGAAGATGATTTTGGCACTCAACAA
CAAGCTCTTGATGGAGAGAAGATAGATGAGAAGTTAAGAGACACAAAGAAGGACCTCCCC
AGTACATCTGTTGATGACCCTTCTATTTCTAGGGAGACAGTTAACTGTGCGAAAGAGGAT
AATTTGTTATTCACTACTAATAACCTGGTTAAGGATGGTGAAGTGACTGACCTCTGTGAT
GGGGAGATTCTTCACCAAGATTTGCATAATGGTTCAGCTGGGCAAAATGGTACAATGAAG
TTTGTTGCATTCAATTTGCGGAGAGGGGGTGAAGCTGATGATTTCTTTGACCCACAGGAA
TCTCTGAGTGTCAGGAGTTTTGGTGAGAGTGAGAGTAATGGTGGATTCCAGCGCTGTTTA
AGTTCCATGACCCCGATGGGAGAATTTTATGATGCTTGGGAAGAACTATCTTCAGAGAAT
GGGCCACAGATACCTACAAATGATTTTGAAAATGAGCTACGAGAGATAAGATTGAGCTTA
TTAACGGAAATTGAAAAGCGAAAGCAAGTAGAAGAAGTTCTAACTAATATGCAAACCCAG
TGGCAGAGGATTCGTGAACGATTATCTCTCGTGGGGTTGAACTTTCCTCCTAATCCTGTT
GCTGGAGAGGAATTGGACAATGAACAACCAGATGATCAGGTGGAGGATTTGTGTCAACAA
GTCCACATCCTTCGGGTTGTATCAGAGTCCATTGGTAAGGGAATAGCAAAGGCTGAGTTG
GAGACAGAAATTGAGGCTCAAATTGAGTCAAAGAACTTTGAGATAGCTCGACTATGGGAC
AGGTTGAATTATTACGAAGCTGTGAATCGAGAGATGTCACAGAGGAATCAGGAAGCTATA
GAGACAGCGCGGCGTCTTAGGCAAATAAGGAAGAGAAAGCAGAAGAAATTGATATGGGGT
TCGATTGCTGCTACAATTACTATAGGCTCTGCTGTCTTAGCGTGGTCTTACTTTTCTACT
GGAAGGGAATCGTCTTCTTTGGATCAATCTCATAGTCTTGAGGGAGACTCTGCATCAGAA
CTATGA