Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009042
CDS Infomation

pacid=37425207 polypeptide=PGSC0003DMP400006262 locus=PGSC0003DMG400003512 ID=PGSC0003DMT400009042.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGCAGACAAGTTTTATAGGCTTACTTGTCTTTGGATTTCTCTGTTTCATTTGT
CTACCTGTTGAGGCTGCCCTTAAGAAATATCAATTTGATGTGAAATTGTCAAATGTGAGC
AGATTGTGCAATGCAAAACAAATGGTTACAGTAAATGGCGGATTTCCGGGGCCAACTATA
TATGCTAGAGAAGGAGATAGAGTTCAAATCAATGTTACTAACTATGTACAATATAACTTG
TCCATCCATTGGCATGGTTTGAAACAATATCGCAATGGTTGGGCAGACGGTCCAGCTTAC
ATAACTCAATGCCCTATCCAGACAGGAAATAGCTATGTTTATGATTTCAATGTAACAGGA
CAAAGAGGAACCTTATGGTGGCATGCACATATTCTTTGGCTAAGGGCAACTGTCTATGGT
GCAATAGTGATAATGCCACAACAAGGAACTCCCTTCCCTTTTCCTCAGCCAGATAGGGAA
GAAGTGCTTGTTCTAGGGGAATGGTGGAATGCTGATGTTGAAGCAGTCGAGAAACAAGGA
AATGCCTTGGGTATTCCTCCTAATATGTCTGATGCTCACACGATTAACGGAAAGCCAGGG
CCTCTTTTCCCATGTTCAGAGAAATATACTTTTGCCATGGAAGTCGAAAAAGGAAAGACA
TACCTGTTGAGAATTATCAATGCTGCTCTCAATGATGAGCTCTTTTTTGCCCTGGCTAAC
CATACCTTCACAGTGGTAGAAATTGATGCAGTCTACACGAAACCATTCTCCACAGAGGCC
ATCCTGATAGCACCAGGCCAAACTACAAACGTTCTGGTTCGTGCAAACCAAGTTCCGGGA
AGATACTTCATGGCTGCAAGGGCCTTCATGGATGCTCCAATCAGTGTGGATAACAAGACT
GCCACTGCTATATTCCAGTACAAGGGAATCCCAGAAACGGTGCTGCCAAAACCTCCAACC
TTGCCTGCACAAAATGACTCAGACTTTGCTTTGAGCTATAACTCTAAACTCAAAAGCCTA
AATACTCCCAAATATCCAGCAAACGTCCCCCTAAATGTTGATCGGCACCTCTTGTTTACA
GTTGGCCTAGGAATAAATCCTTGTCCTACCTGTCTAAATGGAACTAGGCTTACAGCTTCT
CTGAACAACATTTCCTTTATCATGCCACAAACTGCACTTCTTCAGTCTCATTACTTCAAC
ATTAAGGGTGTATACACTCCAGATTTCCCAGACAAACCACCTACTCCATTCAATTTTACA
GGGGCACCCCTTACAGCCAACCTAAGGACAAATGTAGGCACTAGGATCAGCAAAATTGCT
TTCAATTCTACTGTTGAAATAGTAGTCCAAGACACCAACTTGTTGTCGGTGGAATCACAT
CCTTTCCATCTCCATGGCTATAACTTCTTTGTGGTTGGAACTGGCATCGGAAACTTTGAC
CCCAAGAAAGATCCAGCAAAATACAACTTGATCGATCCTATAGAAAGAAATACTGTTGGT
GTTCCTACTGGCGGTTGGACTGCTATTCGATTCAGGGCTGATAATCCAGGGGTCTGGTTT
TTCCACTGTCATCTGGAGTTGCATACAGGCTGGGGACTGAAAACGGCATTTTTAGTGGAA
GATGGACCAGGATCAGATCATAATGTTCTGCCTCCACCAAAGGATCTTCCAACCTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006262
PEP Infomation

pacid=37425207 transcript=PGSC0003DMT400009042 locus=PGSC0003DMG400003512 ID=PGSC0003DMT400009042.v4.03 annot-version=v4.03
Sequence

MAKQTSFIGLLVFGFLCFICLPVEAALKKYQFDVKLSNVSRLCNAKQMVTVNGGFPGPTI
YAREGDRVQINVTNYVQYNLSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYVYDFNVTG
QRGTLWWHAHILWLRATVYGAIVIMPQQGTPFPFPQPDREEVLVLGEWWNADVEAVEKQG
NALGIPPNMSDAHTINGKPGPLFPCSEKYTFAMEVEKGKTYLLRIINAALNDELFFALAN
HTFTVVEIDAVYTKPFSTEAILIAPGQTTNVLVRANQVPGRYFMAARAFMDAPISVDNKT
ATAIFQYKGIPETVLPKPPTLPAQNDSDFALSYNSKLKSLNTPKYPANVPLNVDRHLLFT
VGLGINPCPTCLNGTRLTASLNNISFIMPQTALLQSHYFNIKGVYTPDFPDKPPTPFNFT
GAPLTANLRTNVGTRISKIAFNSTVEIVVQDTNLLSVESHPFHLHGYNFFVVGTGIGNFD
PKKDPAKYNLIDPIERNTVGVPTGGWTAIRFRADNPGVWFFHCHLELHTGWGLKTAFLVE
DGPGSDHNVLPPPKDLPTC*

Transcript Sequence

Transcript ID

PGSC0003DMT400009042
Transcript Infomation

pacid=37425207 locus=PGSC0003DMG400003512 ID=PGSC0003DMT400009042.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGCAGACAAGTTTTATAGGCTTACTTGTCTTTGGATTTCTCTGTTTCATTTGT
CTACCTGTTGAGGCTGCCCTTAAGAAATATCAATTTGATGTGAAATTGTCAAATGTGAGC
AGATTGTGCAATGCAAAACAAATGGTTACAGTAAATGGCGGATTTCCGGGGCCAACTATA
TATGCTAGAGAAGGAGATAGAGTTCAAATCAATGTTACTAACTATGTACAATATAACTTG
TCCATCCATTGGCATGGTTTGAAACAATATCGCAATGGTTGGGCAGACGGTCCAGCTTAC
ATAACTCAATGCCCTATCCAGACAGGAAATAGCTATGTTTATGATTTCAATGTAACAGGA
CAAAGAGGAACCTTATGGTGGCATGCACATATTCTTTGGCTAAGGGCAACTGTCTATGGT
GCAATAGTGATAATGCCACAACAAGGAACTCCCTTCCCTTTTCCTCAGCCAGATAGGGAA
GAAGTGCTTGTTCTAGGGGAATGGTGGAATGCTGATGTTGAAGCAGTCGAGAAACAAGGA
AATGCCTTGGGTATTCCTCCTAATATGTCTGATGCTCACACGATTAACGGAAAGCCAGGG
CCTCTTTTCCCATGTTCAGAGAAATATACTTTTGCCATGGAAGTCGAAAAAGGAAAGACA
TACCTGTTGAGAATTATCAATGCTGCTCTCAATGATGAGCTCTTTTTTGCCCTGGCTAAC
CATACCTTCACAGTGGTAGAAATTGATGCAGTCTACACGAAACCATTCTCCACAGAGGCC
ATCCTGATAGCACCAGGCCAAACTACAAACGTTCTGGTTCGTGCAAACCAAGTTCCGGGA
AGATACTTCATGGCTGCAAGGGCCTTCATGGATGCTCCAATCAGTGTGGATAACAAGACT
GCCACTGCTATATTCCAGTACAAGGGAATCCCAGAAACGGTGCTGCCAAAACCTCCAACC
TTGCCTGCACAAAATGACTCAGACTTTGCTTTGAGCTATAACTCTAAACTCAAAAGCCTA
AATACTCCCAAATATCCAGCAAACGTCCCCCTAAATGTTGATCGGCACCTCTTGTTTACA
GTTGGCCTAGGAATAAATCCTTGTCCTACCTGTCTAAATGGAACTAGGCTTACAGCTTCT
CTGAACAACATTTCCTTTATCATGCCACAAACTGCACTTCTTCAGTCTCATTACTTCAAC
ATTAAGGGTGTATACACTCCAGATTTCCCAGACAAACCACCTACTCCATTCAATTTTACA
GGGGCACCCCTTACAGCCAACCTAAGGACAAATGTAGGCACTAGGATCAGCAAAATTGCT
TTCAATTCTACTGTTGAAATAGTAGTCCAAGACACCAACTTGTTGTCGGTGGAATCACAT
CCTTTCCATCTCCATGGCTATAACTTCTTTGTGGTTGGAACTGGCATCGGAAACTTTGAC
CCCAAGAAAGATCCAGCAAAATACAACTTGATCGATCCTATAGAAAGAAATACTGTTGGT
GTTCCTACTGGCGGTTGGACTGCTATTCGATTCAGGGCTGATAATCCAGGGGTCTGGTTT
TTCCACTGTCATCTGGAGTTGCATACAGGCTGGGGACTGAAAACGGCATTTTTAGTGGAA
GATGGACCAGGATCAGATCATAATGTTCTGCCTCCACCAAAGGATCTTCCAACCTGCTAA