Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009037
CDS Infomation

pacid=37426139 polypeptide=PGSC0003DMP400006257 locus=PGSC0003DMG400003511 ID=PGSC0003DMT400009037.v4.03 annot-version=v4.03
Sequence

ATGTTGCTTCCAGCAATTGAAGAAGCCCGTCCTGGATCCAACCCTGGAATACAGGTACTT
TGCCAGTTAACCAGAGCACTTGACAAAGCCAAGGGCATTCTTCAGCATTGTAGTGAATCC
AGTAAACTATACTTGGCACTAACTGGAAATGTTATACTTTCAAGATGCAACAAATCAATT
AAATTGCTTGAGCAAAGCTTGAGCTGTGTGCAGAATATGGTTCCTGTAATGTTGGCTACA
CAGATATCGCAACTGGTTGCTGACCTGGGGGCTGGGATATTCAGCTTGGACCCATCTGAA
GAGGAGGCAAGGAAGGTATTGAGCAAGCTACTTCATCAGTGTACGTCTACAACTCATTCA
GGGGAAGAACATGTCCTTGAGGCTATTCAAATTGCTATGCGGAGCCTGCGTATCACATCT
CCAAAAGATCTTTTGATAGAGAAAAGATCCATCAAAAAACAACTGGAGAAAATTGGGGAG
GGTGATCCACCAAAAAGGAAAATCTTATTGTTCTTTCTGAGTCTTCTCAACAAAAATGGA
AAATCTATCGTGGCAGAGCACACAGAGAATGGATCTCTGCAGCATGAGGACTCCCTTGAA
TATGAAGTGGAATCTCGTCTGAAATGTAATCATAATGATGCTCAAAGAGATATCTTCAAC
GGCTCTCGACTTCCGGATGAGTTCAAATGTCCTTTATCATCAAGACTAATGTATGATCCT
GTTGTCATTGCTTCTGGACAAACATATGAAAGATTTTGGATTGAAAAATGGTTTGCTCAA
GGTAATGATACATGTCCAAAAACTAAAAGGAAATTGGTCCATTTGTCGTCAACCCCAAAT
AACTCAATGAAGGACCTTATATCAAGGTGGACTGCAGCACATGGGGTCAGCGTTGTTGAT
CCCAGTGTACAAGCAACAGTAGGTCACTCATGGGAATCATCTTCCACTTCAATTGCTAGC
TTGAGCAGTTCAATGATGGATCTATCTATAAATATAGACTTCAGCAATTTGTCACTGGGA
ACTTCAGATGCTAGTTTTACATCACATGCTTCGCATTCTAAGATTTCAAATGACTTTCAT
AAAGGTCAATCTCGTGAAAGCATACATGAAATGGAACTGGAGCGTTTAACGAGGCTCAGT
TCACTTTCTTGGGAGTCTCAATGCAACTTGGTTGGAAATATCAGAAACATGTTGACACAA
AACGGTGAAGCTAGCAATTGGATGTCATCGGACAATTTTATTCAAAAACTTTTCAGATTC
TTGAAAGATGCACATAAATGTGATGATCAGGATGCTCAATTATTGGGATGTCAGTCATTA
TTAGCAGTTCTAGACGAATGCGGAAGCAGTTTGCCATACTTGAACGATGACGCATTTGCT
CTTTTGACCTCATTGCTTGGTTCGGAGGTTTCTAAGGAAGCTATTGCTATATTCGAAGTG
TTGTCCCGCCACCAAAACTGTCACCATAAAATTACCATGTCTGGTGCACTACCTACTCTC
CTGGAGATCCTTGATGCCCACAGTAGAGAATTGCAGGAACCAGCCATCAAAATATTATGT
AACATGTCAGGAAGTAGCAAAATTGGTTCCTTGATTGCACCTTCAGAGTTGGTTCCTAAA
TTGGTTCCTTTTCTTGAGGATACAGTGCTCGCAAGAAATTGTGTCATCATTTTGCAAAAT
TTGTGCAACAAAGAAGATGCTAGAATTGCTATAGCTGAAACTGATGGATGCATTGCAGCA
ATTGTGAAACTGCTCGAACGTGACAATCGCAAGGACCAGGAACATGCTGTGGATTTTCTT
CTTTCTTTATGCCTACAACGGGTTCAATATTGTCAACTGGTAATGGATGAAGGTGTCATC
CCTGAACTTGTCTCTGTATCTATTAATGGAAACAACAAAGCAAAGGCAATGGCTTTGGAA
TTGTTGAGACTGCTGAAGGGAGAATTTAGTGATACTGGAGAATCTTACGAACCGGAAGTC
TACATTCCTAAACCCCCTACCACTGACTTTACTCAACCGAAATCTCGTTCCCAAGGAACA
GGAATTTTTGGGAAATTTTTCTCGAAACGTACTTCGCCTACTGCCAAAAGGATAAATAGA
AAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006257
PEP Infomation

pacid=37426139 transcript=PGSC0003DMT400009037 locus=PGSC0003DMG400003511 ID=PGSC0003DMT400009037.v4.03 annot-version=v4.03
Sequence

MLLPAIEEARPGSNPGIQVLCQLTRALDKAKGILQHCSESSKLYLALTGNVILSRCNKSI
KLLEQSLSCVQNMVPVMLATQISQLVADLGAGIFSLDPSEEEARKVLSKLLHQCTSTTHS
GEEHVLEAIQIAMRSLRITSPKDLLIEKRSIKKQLEKIGEGDPPKRKILLFFLSLLNKNG
KSIVAEHTENGSLQHEDSLEYEVESRLKCNHNDAQRDIFNGSRLPDEFKCPLSSRLMYDP
VVIASGQTYERFWIEKWFAQGNDTCPKTKRKLVHLSSTPNNSMKDLISRWTAAHGVSVVD
PSVQATVGHSWESSSTSIASLSSSMMDLSINIDFSNLSLGTSDASFTSHASHSKISNDFH
KGQSRESIHEMELERLTRLSSLSWESQCNLVGNIRNMLTQNGEASNWMSSDNFIQKLFRF
LKDAHKCDDQDAQLLGCQSLLAVLDECGSSLPYLNDDAFALLTSLLGSEVSKEAIAIFEV
LSRHQNCHHKITMSGALPTLLEILDAHSRELQEPAIKILCNMSGSSKIGSLIAPSELVPK
LVPFLEDTVLARNCVIILQNLCNKEDARIAIAETDGCIAAIVKLLERDNRKDQEHAVDFL
LSLCLQRVQYCQLVMDEGVIPELVSVSINGNNKAKAMALELLRLLKGEFSDTGESYEPEV
YIPKPPTTDFTQPKSRSQGTGIFGKFFSKRTSPTAKRINRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400009037
Transcript Infomation

pacid=37426139 locus=PGSC0003DMG400003511 ID=PGSC0003DMT400009037.v4.03 annot-version=v4.03
Sequence

ATGTTGCTTCCAGCAATTGAAGAAGCCCGTCCTGGATCCAACCCTGGAATACAGGTACTT
TGCCAGTTAACCAGAGCACTTGACAAAGCCAAGGGCATTCTTCAGCATTGTAGTGAATCC
AGTAAACTATACTTGGCACTAACTGGAAATGTTATACTTTCAAGATGCAACAAATCAATT
AAATTGCTTGAGCAAAGCTTGAGCTGTGTGCAGAATATGGTTCCTGTAATGTTGGCTACA
CAGATATCGCAACTGGTTGCTGACCTGGGGGCTGGGATATTCAGCTTGGACCCATCTGAA
GAGGAGGCAAGGAAGGTATTGAGCAAGCTACTTCATCAGTGTACGTCTACAACTCATTCA
GGGGAAGAACATGTCCTTGAGGCTATTCAAATTGCTATGCGGAGCCTGCGTATCACATCT
CCAAAAGATCTTTTGATAGAGAAAAGATCCATCAAAAAACAACTGGAGAAAATTGGGGAG
GGTGATCCACCAAAAAGGAAAATCTTATTGTTCTTTCTGAGTCTTCTCAACAAAAATGGA
AAATCTATCGTGGCAGAGCACACAGAGAATGGATCTCTGCAGCATGAGGACTCCCTTGAA
TATGAAGTGGAATCTCGTCTGAAATGTAATCATAATGATGCTCAAAGAGATATCTTCAAC
GGCTCTCGACTTCCGGATGAGTTCAAATGTCCTTTATCATCAAGACTAATGTATGATCCT
GTTGTCATTGCTTCTGGACAAACATATGAAAGATTTTGGATTGAAAAATGGTTTGCTCAA
GGTAATGATACATGTCCAAAAACTAAAAGGAAATTGGTCCATTTGTCGTCAACCCCAAAT
AACTCAATGAAGGACCTTATATCAAGGTGGACTGCAGCACATGGGGTCAGCGTTGTTGAT
CCCAGTGTACAAGCAACAGTAGGTCACTCATGGGAATCATCTTCCACTTCAATTGCTAGC
TTGAGCAGTTCAATGATGGATCTATCTATAAATATAGACTTCAGCAATTTGTCACTGGGA
ACTTCAGATGCTAGTTTTACATCACATGCTTCGCATTCTAAGATTTCAAATGACTTTCAT
AAAGGTCAATCTCGTGAAAGCATACATGAAATGGAACTGGAGCGTTTAACGAGGCTCAGT
TCACTTTCTTGGGAGTCTCAATGCAACTTGGTTGGAAATATCAGAAACATGTTGACACAA
AACGGTGAAGCTAGCAATTGGATGTCATCGGACAATTTTATTCAAAAACTTTTCAGATTC
TTGAAAGATGCACATAAATGTGATGATCAGGATGCTCAATTATTGGGATGTCAGTCATTA
TTAGCAGTTCTAGACGAATGCGGAAGCAGTTTGCCATACTTGAACGATGACGCATTTGCT
CTTTTGACCTCATTGCTTGGTTCGGAGGTTTCTAAGGAAGCTATTGCTATATTCGAAGTG
TTGTCCCGCCACCAAAACTGTCACCATAAAATTACCATGTCTGGTGCACTACCTACTCTC
CTGGAGATCCTTGATGCCCACAGTAGAGAATTGCAGGAACCAGCCATCAAAATATTATGT
AACATGTCAGGAAGTAGCAAAATTGGTTCCTTGATTGCACCTTCAGAGTTGGTTCCTAAA
TTGGTTCCTTTTCTTGAGGATACAGTGCTCGCAAGAAATTGTGTCATCATTTTGCAAAAT
TTGTGCAACAAAGAAGATGCTAGAATTGCTATAGCTGAAACTGATGGATGCATTGCAGCA
ATTGTGAAACTGCTCGAACGTGACAATCGCAAGGACCAGGAACATGCTGTGGATTTTCTT
CTTTCTTTATGCCTACAACGGGTTCAATATTGTCAACTGGTAATGGATGAAGGTGTCATC
CCTGAACTTGTCTCTGTATCTATTAATGGAAACAACAAAGCAAAGGCAATGGCTTTGGAA
TTGTTGAGACTGCTGAAGGGAGAATTTAGTGATACTGGAGAATCTTACGAACCGGAAGTC
TACATTCCTAAACCCCCTACCACTGACTTTACTCAACCGAAATCTCGTTCCCAAGGAACA
GGAATTTTTGGGAAATTTTTCTCGAAACGTACTTCGCCTACTGCCAAAAGGATAAATAGA
AAGTAA