Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008904
CDS Infomation

pacid=37424587 polypeptide=PGSC0003DMP400006166 locus=PGSC0003DMG400003462 ID=PGSC0003DMT400008904.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCGTGGAGATAGACCTTGGAAAGCTTCCATTTGACATTGATTTTCATCCATCC
GATCATCTTGTTGCTGCTGGACTCATCACCGGCGACCTTCTCTTGTACCGTTACAATGCT
GATTCTCCGGCTCAGAAATTGTTGGAAGTAAAAGCTCATAGCGAATCATGTAGAACTGTC
CGGTTTATCCACGAGGGCCGTGCAATTGTGACGGGATCTCCAGATTGTTCTATTCTTGCA
ACAGACATTGAGACTGGCTCAGAAATTGTTCGCCTGGAGAATTCCCATGGGGCTGCTGTT
AATCGAATTGTAAATTTGACTGAGTCAACTATTGCTTCTGGAGACGATGAAGGATGCATT
AAGGTATGGGATACCAGACAACGCTCATGCTCCCATTCTTTTAATGCACATGAAGAATAC
ATTTCAGACATTACATTTGCAGCTGATTCCATGAAACTATTGGCAACTAGTGGCGATGGG
TCACTTTCTGTATGCAATTTAAGGAGCAGCAAGATCCAAACTCGCTCTGAATTTTCTGAA
GAGGAGCTGCTCTCTGTGGTAATTATGAAGAATGGTAGAAAAGTAATATGTGGTACTCAA
TCTGGAACTCTGTTACTGTATTCATGGGGATTTTTCAAGGATTGCAGTGATCGCTTTGTT
GATCTATCACCAAACTCTATAGATGCATTACTGAAACTTGACGAAGATCGAGTAATAACT
GGGTGTGAGAATGGGCTTATCAGCCTGGTTGGCATATTACCGAACAAGATTATTCAGCCA
ATTGGCGAGCATTCAGAATACCCCGTTGAACGTCTTGCCTTTTCTCATGATAGAAAGTAT
CTTGGAAGTGCATCACATGACCATTTACTGAAATTGTGGGATCTGAATGAGCTGGTGCAA
GATTCTGAGGATGGTGCGAAGAATGATTCAAGTGCTGAAGATAGTGATAATGATGGGATG
GATGTTGATGATAATATACCAAAATCTTCCAAAGGGAGCAAGAAGAAAAATGTAAATAAA
GGGCCAGATCCTGGGAGTTCGAACAATTTCTTTGCAGAATTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006166
PEP Infomation

pacid=37424587 transcript=PGSC0003DMT400008904 locus=PGSC0003DMG400003462 ID=PGSC0003DMT400008904.v4.03 annot-version=v4.03
Sequence

MAAVEIDLGKLPFDIDFHPSDHLVAAGLITGDLLLYRYNADSPAQKLLEVKAHSESCRTV
RFIHEGRAIVTGSPDCSILATDIETGSEIVRLENSHGAAVNRIVNLTESTIASGDDEGCI
KVWDTRQRSCSHSFNAHEEYISDITFAADSMKLLATSGDGSLSVCNLRSSKIQTRSEFSE
EELLSVVIMKNGRKVICGTQSGTLLLYSWGFFKDCSDRFVDLSPNSIDALLKLDEDRVIT
GCENGLISLVGILPNKIIQPIGEHSEYPVERLAFSHDRKYLGSASHDHLLKLWDLNELVQ
DSEDGAKNDSSAEDSDNDGMDVDDNIPKSSKGSKKKNVNKGPDPGSSNNFFAEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400008904
Transcript Infomation

pacid=37424587 locus=PGSC0003DMG400003462 ID=PGSC0003DMT400008904.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCGTGGAGATAGACCTTGGAAAGCTTCCATTTGACATTGATTTTCATCCATCC
GATCATCTTGTTGCTGCTGGACTCATCACCGGCGACCTTCTCTTGTACCGTTACAATGCT
GATTCTCCGGCTCAGAAATTGTTGGAAGTAAAAGCTCATAGCGAATCATGTAGAACTGTC
CGGTTTATCCACGAGGGCCGTGCAATTGTGACGGGATCTCCAGATTGTTCTATTCTTGCA
ACAGACATTGAGACTGGCTCAGAAATTGTTCGCCTGGAGAATTCCCATGGGGCTGCTGTT
AATCGAATTGTAAATTTGACTGAGTCAACTATTGCTTCTGGAGACGATGAAGGATGCATT
AAGGTATGGGATACCAGACAACGCTCATGCTCCCATTCTTTTAATGCACATGAAGAATAC
ATTTCAGACATTACATTTGCAGCTGATTCCATGAAACTATTGGCAACTAGTGGCGATGGG
TCACTTTCTGTATGCAATTTAAGGAGCAGCAAGATCCAAACTCGCTCTGAATTTTCTGAA
GAGGAGCTGCTCTCTGTGGTAATTATGAAGAATGGTAGAAAAGTAATATGTGGTACTCAA
TCTGGAACTCTGTTACTGTATTCATGGGGATTTTTCAAGGATTGCAGTGATCGCTTTGTT
GATCTATCACCAAACTCTATAGATGCATTACTGAAACTTGACGAAGATCGAGTAATAACT
GGGTGTGAGAATGGGCTTATCAGCCTGGTTGGCATATTACCGAACAAGATTATTCAGCCA
ATTGGCGAGCATTCAGAATACCCCGTTGAACGTCTTGCCTTTTCTCATGATAGAAAGTAT
CTTGGAAGTGCATCACATGACCATTTACTGAAATTGTGGGATCTGAATGAGCTGGTGCAA
GATTCTGAGGATGGTGCGAAGAATGATTCAAGTGCTGAAGATAGTGATAATGATGGGATG
GATGTTGATGATAATATACCAAAATCTTCCAAAGGGAGCAAGAAGAAAAATGTAAATAAA
GGGCCAGATCCTGGGAGTTCGAACAATTTCTTTGCAGAATTATGA