Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008875
CDS Infomation

pacid=37430920 polypeptide=PGSC0003DMP400006146 locus=PGSC0003DMG400003446 ID=PGSC0003DMT400008875.v4.03 annot-version=v4.03
Sequence

ATGTGCTCCTTTCTATCCAAATATCTCAGATCCAAAACTTCCACTCTGCCACTGCAGATC
CGCTGCCTCCAAGGAGGAGGGGGAGGAGTCGCGGGATACTTCAACTCTCCGATTTTACAT
AAAAATCTGATGATGCCCTTACGCCAATTTTGTAAGCTTCCAATCGGAGTATCGAAAGAG
GAACTATTGAGAGAAGGGTTGCAGCCTGAGCTGATGCCGAAACACGTAGCTATTATACCG
GATGGTAACCGGAGATGGGCTAAGGAGAGGGGTTTGTCACCGGAAAAAGGTCATGAAGCT
GGAAAAAAAGTGCTCGGAGATTTGTGTCGTTATTGTTCAAAATGGGGAGTCAAAGTTCTT
TCTGCTTATGCTTTTTCTACTGAGAATTGGTCAAGGCCCAAGGGTGAAGTAACTTTCTTG
ATGACGAGCTACTTTGAAAGGCTTTTTACGGAATTCATGAGGTATGGGATGAAAATGTCC
TTTATTGGAGACAGGTCTAACCTTCCAAATTCTTTGAAAGAAATGTTAAGATTAGCTGAG
GAAACCACAAAGGACAACACAGGGCTTCATTTTGTGGCAGCACTTAACTATGGTGGAAGA
TATGACATAACACAAGCAACTAAAAAGATTGCTAGTAAAGTTAAAGATGGAGTTATTCAA
TTAGAGGATATTAATGACAAGTTAATTGATCAAGAATTAGAGACTAATAAGATTTTGGAA
TATCCTAATCCTGATTTACTCATCAGAACAAGTGGAGAGTTGAGAATTAGTAACTACATG
TTGTGGCAATTGGCTTATAGTGAATTCTACTTTGTGGATAAATTGTTTCCTCAATTGGAT
GAAGATGATTTTGTAGCAGCTTTACGTTCGTTTCAGCAAAGGCAAAGACGTTATGGTGGG
CACAAAATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006146
PEP Infomation

pacid=37430920 transcript=PGSC0003DMT400008875 locus=PGSC0003DMG400003446 ID=PGSC0003DMT400008875.v4.03 annot-version=v4.03
Sequence

MCSFLSKYLRSKTSTLPLQIRCLQGGGGGVAGYFNSPILHKNLMMPLRQFCKLPIGVSKE
ELLREGLQPELMPKHVAIIPDGNRRWAKERGLSPEKGHEAGKKVLGDLCRYCSKWGVKVL
SAYAFSTENWSRPKGEVTFLMTSYFERLFTEFMRYGMKMSFIGDRSNLPNSLKEMLRLAE
ETTKDNTGLHFVAALNYGGRYDITQATKKIASKVKDGVIQLEDINDKLIDQELETNKILE
YPNPDLLIRTSGELRISNYMLWQLAYSEFYFVDKLFPQLDEDDFVAALRSFQQRQRRYGG
HKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400008875
Transcript Infomation

pacid=37430920 locus=PGSC0003DMG400003446 ID=PGSC0003DMT400008875.v4.03 annot-version=v4.03
Sequence

ATGTGCTCCTTTCTATCCAAATATCTCAGATCCAAAACTTCCACTCTGCCACTGCAGATC
CGCTGCCTCCAAGGAGGAGGGGGAGGAGTCGCGGGATACTTCAACTCTCCGATTTTACAT
AAAAATCTGATGATGCCCTTACGCCAATTTTGTAAGCTTCCAATCGGAGTATCGAAAGAG
GAACTATTGAGAGAAGGGTTGCAGCCTGAGCTGATGCCGAAACACGTAGCTATTATACCG
GATGGTAACCGGAGATGGGCTAAGGAGAGGGGTTTGTCACCGGAAAAAGGTCATGAAGCT
GGAAAAAAAGTGCTCGGAGATTTGTGTCGTTATTGTTCAAAATGGGGAGTCAAAGTTCTT
TCTGCTTATGCTTTTTCTACTGAGAATTGGTCAAGGCCCAAGGGTGAAGTAACTTTCTTG
ATGACGAGCTACTTTGAAAGGCTTTTTACGGAATTCATGAGGTATGGGATGAAAATGTCC
TTTATTGGAGACAGGTCTAACCTTCCAAATTCTTTGAAAGAAATGTTAAGATTAGCTGAG
GAAACCACAAAGGACAACACAGGGCTTCATTTTGTGGCAGCACTTAACTATGGTGGAAGA
TATGACATAACACAAGCAACTAAAAAGATTGCTAGTAAAGTTAAAGATGGAGTTATTCAA
TTAGAGGATATTAATGACAAGTTAATTGATCAAGAATTAGAGACTAATAAGATTTTGGAA
TATCCTAATCCTGATTTACTCATCAGAACAAGTGGAGAGTTGAGAATTAGTAACTACATG
TTGTGGCAATTGGCTTATAGTGAATTCTACTTTGTGGATAAATTGTTTCCTCAATTGGAT
GAAGATGATTTTGTAGCAGCTTTACGTTCGTTTCAGCAAAGGCAAAGACGTTATGGTGGG
CACAAAATTTAA