Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008789
CDS Infomation

pacid=37441661 polypeptide=PGSC0003DMP400006095 locus=PGSC0003DMG400003417 ID=PGSC0003DMT400008789.v4.03 annot-version=v4.03
Sequence

ATGGAAAGCAATTTCTTGCCGTCCATTTCTTTAAGAGCTAGCCGAAGGGCAGACCGTAAT
CATCTTCAATCTAGAGATGGTAAGGAAGGCCTTGCAAGTGGGAAGTCATACCAAGACTCT
CCTCTGAAGATTATATGGAAAAGGGGTTTCATTCGGTTGGTTCTTGTGGGCGGAATTATT
TGGGGTCTGCTCATTCTAACTGCATTGTTATTCCACGCGTGGTCTTGCCAGTCATCTATT
GCATTCTTTTCAGCCCTTTGTAACAAAAGCAGTGTAATTTATGGAGCAATACAGAGCCTG
GGACTTGTGACACCTCCACATCGTTGTTCTATTCCTGTAGCAGATGACCCAAATAAGATT
GTCATTCCACAAAAGAGATCTCCGGAAAAATTTGTGCAATCACTGTCTTACTTTATGGAG
GATTTTACAGAAACCAATGGATCTCAGTCACCACCTTTATTTGGAGGACATATAACATGG
CAACAGAGAGATGAGAGCTTTAAAGTAAAACCAACCATGAAGGTGCACTGTGGATTTATA
CGGAATGGTGGTGCAGAAATGGCTCAGAAAGACGTCAAATTTGTCAAGAAGTGTCTATTT
GTTGTTGCCTCTGGTATTTTTGATGGATATGATACACCTCACCAGCCATCAAATATAAGT
GCACGTTCTCAGAAGCTCTTTTGCTTTCTTATGGTTGTCGATGAAATATCCCTTGAGTTC
ATCAAGAAAAATGTTACTGTTAGAGAGGACAACGACGGGGGAGAATGGGTTGGTATCTGG
CGTTTGATTCTATTGAAGCATCCTCCATATGATGAGCCCAGAAGGAATGGAAAAGTTCCC
AAAATATTAACCCACAGATTATTTCCTCAAGCACAGTACAGTATCTGGATTGATGGTAAA
ATGGAGCTGATAGTTGACCCATTGCTATTACTTGAAAGATACTTGTGGCGTGAGAAGAAT
ACATTTGCAATTGCTCAGCACAAGCATCACCGCAATGTATATGAAGAGGCTGATGCAAAC
AAAAGGAGGAAACGATATGCTCGTCCGTTGATTGATCTTCATATGAAGATATATCGCTAC
GAGGGAATGGAACCATGGAATCCAAAGAAAAGTACTCCTAGTGATATTCCAGAAGGAGCT
GTTATCATACGAGAACATACTGCACTGAGTAACTTGTTTAGTTGCTTGTGGTTCAATGAA
GTTCACCTCTTCACACCGAGAGATCAGTTGAGCTTTGGATATGTTGTCTATAGGTTAGGA
GGCCTGTTCAAATTTTTTATGTTCCCTAATTGTGAGTATAATTCCATTTTTATTTTGCAC
AATCATACCCGCGAACATTCATCCAAAGTAGAGTGGGTAAAATCTTTGGATGAATTTAAG
AAGGATAAAACGGGTGGTTTGAAAGAGAGTAGGGGAGGATTAGGCTTGTGGACTCCTTAT
CCAGGGGATCTTGATTCAGTTGTGTTACCATCTGTAAAGAGAACTTCAAAAGCTGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006095
PEP Infomation

pacid=37441661 transcript=PGSC0003DMT400008789 locus=PGSC0003DMG400003417 ID=PGSC0003DMT400008789.v4.03 annot-version=v4.03
Sequence

MESNFLPSISLRASRRADRNHLQSRDGKEGLASGKSYQDSPLKIIWKRGFIRLVLVGGII
WGLLILTALLFHAWSCQSSIAFFSALCNKSSVIYGAIQSLGLVTPPHRCSIPVADDPNKI
VIPQKRSPEKFVQSLSYFMEDFTETNGSQSPPLFGGHITWQQRDESFKVKPTMKVHCGFI
RNGGAEMAQKDVKFVKKCLFVVASGIFDGYDTPHQPSNISARSQKLFCFLMVVDEISLEF
IKKNVTVREDNDGGEWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGK
MELIVDPLLLLERYLWREKNTFAIAQHKHHRNVYEEADANKRRKRYARPLIDLHMKIYRY
EGMEPWNPKKSTPSDIPEGAVIIREHTALSNLFSCLWFNEVHLFTPRDQLSFGYVVYRLG
GLFKFFMFPNCEYNSIFILHNHTREHSSKVEWVKSLDEFKKDKTGGLKESRGGLGLWTPY
PGDLDSVVLPSVKRTSKAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400008789
Transcript Infomation

pacid=37441661 locus=PGSC0003DMG400003417 ID=PGSC0003DMT400008789.v4.03 annot-version=v4.03
Sequence

ATGGAAAGCAATTTCTTGCCGTCCATTTCTTTAAGAGCTAGCCGAAGGGCAGACCGTAAT
CATCTTCAATCTAGAGATGGTAAGGAAGGCCTTGCAAGTGGGAAGTCATACCAAGACTCT
CCTCTGAAGATTATATGGAAAAGGGGTTTCATTCGGTTGGTTCTTGTGGGCGGAATTATT
TGGGGTCTGCTCATTCTAACTGCATTGTTATTCCACGCGTGGTCTTGCCAGTCATCTATT
GCATTCTTTTCAGCCCTTTGTAACAAAAGCAGTGTAATTTATGGAGCAATACAGAGCCTG
GGACTTGTGACACCTCCACATCGTTGTTCTATTCCTGTAGCAGATGACCCAAATAAGATT
GTCATTCCACAAAAGAGATCTCCGGAAAAATTTGTGCAATCACTGTCTTACTTTATGGAG
GATTTTACAGAAACCAATGGATCTCAGTCACCACCTTTATTTGGAGGACATATAACATGG
CAACAGAGAGATGAGAGCTTTAAAGTAAAACCAACCATGAAGGTGCACTGTGGATTTATA
CGGAATGGTGGTGCAGAAATGGCTCAGAAAGACGTCAAATTTGTCAAGAAGTGTCTATTT
GTTGTTGCCTCTGGTATTTTTGATGGATATGATACACCTCACCAGCCATCAAATATAAGT
GCACGTTCTCAGAAGCTCTTTTGCTTTCTTATGGTTGTCGATGAAATATCCCTTGAGTTC
ATCAAGAAAAATGTTACTGTTAGAGAGGACAACGACGGGGGAGAATGGGTTGGTATCTGG
CGTTTGATTCTATTGAAGCATCCTCCATATGATGAGCCCAGAAGGAATGGAAAAGTTCCC
AAAATATTAACCCACAGATTATTTCCTCAAGCACAGTACAGTATCTGGATTGATGGTAAA
ATGGAGCTGATAGTTGACCCATTGCTATTACTTGAAAGATACTTGTGGCGTGAGAAGAAT
ACATTTGCAATTGCTCAGCACAAGCATCACCGCAATGTATATGAAGAGGCTGATGCAAAC
AAAAGGAGGAAACGATATGCTCGTCCGTTGATTGATCTTCATATGAAGATATATCGCTAC
GAGGGAATGGAACCATGGAATCCAAAGAAAAGTACTCCTAGTGATATTCCAGAAGGAGCT
GTTATCATACGAGAACATACTGCACTGAGTAACTTGTTTAGTTGCTTGTGGTTCAATGAA
GTTCACCTCTTCACACCGAGAGATCAGTTGAGCTTTGGATATGTTGTCTATAGGTTAGGA
GGCCTGTTCAAATTTTTTATGTTCCCTAATTGTGAGTATAATTCCATTTTTATTTTGCAC
AATCATACCCGCGAACATTCATCCAAAGTAGAGTGGGTAAAATCTTTGGATGAATTTAAG
AAGGATAAAACGGGTGGTTTGAAAGAGAGTAGGGGAGGATTAGGCTTGTGGACTCCTTAT
CCAGGGGATCTTGATTCAGTTGTGTTACCATCTGTAAAGAGAACTTCAAAAGCTGGATGA