Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008779
CDS Infomation

pacid=37477991 polypeptide=PGSC0003DMP400006089 locus=PGSC0003DMG400003411 ID=PGSC0003DMT400008779.v4.03 annot-version=v4.03
Sequence

ATGTCAATGTGTTTACAAGCAATCAATCTCAACACTTTCACTCATCAATCTCGAACTCGA
ATCCCGGTACATAATCGAACTCTCGTCAATGTCAACTCTCACTTACGAATTTCACCAATC
TGGAATATTCGCAAGGGAATAATCACTGCTTGCTCAGCTCCCAGCCAAGAAATTTTGCAG
CAAAAACTGTCTGATGAAGATGAGAATAGTAGTAGTGATGCAGAAAACTCAGATTCAGTG
GAAAATGAACAACAAGTGGTGGTGGAATTTTCTGCGAATGAAAGCATTTGGAATCAAACG
GTGGAGATTATCAAGTTTTCAGGGCCAGCAGTTGGGCTTTGGTTATCCGGACCTTTGATG
AGTCTTATTGATACGGCTGTTGTTGGTCAAGGAAGTTCAATTGAACTTGCCGCTCTAGGT
CCTGGAACAGTCTTTTGTGATAACACAAGCTATATTTTTATGTTCCTTTCAATAGCCACT
TCGAATTTAGTTGCTACTTCACTTGCAAGGCAGGACAAAGATCAAGTGCAGCATCAGATA
TCTATCTTGATTTTCCTAGGGTTGGTCTTTGGTGTTCTAATGTTTTTCTGTACGAGATTA
TTTGGTATTCGTGCACTAACTTCTTTTACAGGAGCCAAGAATATAGAAATTATAAACTCA
GCAAACACTTATATCCAGATTCGAGGCTTGGCATGGCCAGCACTGCTGGTTGGTTGGGTT
GCCCAAAGTGCAAGTCTAGGCATGAAAGATTCATGGGGACCTTTAAAGGCTTTGGCAGTT
GCTACTGTTATTAATGGCATTGGCGACATAGTCTTGTGCAGAGTCTTCAGTTATGGTATT
GCTGGAGCGGCATGGGCAACAATGGTGTCCCAACGTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006089
PEP Infomation

pacid=37477991 transcript=PGSC0003DMT400008779 locus=PGSC0003DMG400003411 ID=PGSC0003DMT400008779.v4.03 annot-version=v4.03
Sequence

MSMCLQAINLNTFTHQSRTRIPVHNRTLVNVNSHLRISPIWNIRKGIITACSAPSQEILQ
QKLSDEDENSSSDAENSDSVENEQQVVVEFSANESIWNQTVEIIKFSGPAVGLWLSGPLM
SLIDTAVVGQGSSIELAALGPGTVFCDNTSYIFMFLSIATSNLVATSLARQDKDQVQHQI
SILIFLGLVFGVLMFFCTRLFGIRALTSFTGAKNIEIINSANTYIQIRGLAWPALLVGWV
AQSASLGMKDSWGPLKALAVATVINGIGDIVLCRVFSYGIAGAAWATMVSQRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400008779
Transcript Infomation

pacid=37477991 locus=PGSC0003DMG400003411 ID=PGSC0003DMT400008779.v4.03 annot-version=v4.03
Sequence

ATGTCAATGTGTTTACAAGCAATCAATCTCAACACTTTCACTCATCAATCTCGAACTCGA
ATCCCGGTACATAATCGAACTCTCGTCAATGTCAACTCTCACTTACGAATTTCACCAATC
TGGAATATTCGCAAGGGAATAATCACTGCTTGCTCAGCTCCCAGCCAAGAAATTTTGCAG
CAAAAACTGTCTGATGAAGATGAGAATAGTAGTAGTGATGCAGAAAACTCAGATTCAGTG
GAAAATGAACAACAAGTGGTGGTGGAATTTTCTGCGAATGAAAGCATTTGGAATCAAACG
GTGGAGATTATCAAGTTTTCAGGGCCAGCAGTTGGGCTTTGGTTATCCGGACCTTTGATG
AGTCTTATTGATACGGCTGTTGTTGGTCAAGGAAGTTCAATTGAACTTGCCGCTCTAGGT
CCTGGAACAGTCTTTTGTGATAACACAAGCTATATTTTTATGTTCCTTTCAATAGCCACT
TCGAATTTAGTTGCTACTTCACTTGCAAGGCAGGACAAAGATCAAGTGCAGCATCAGATA
TCTATCTTGATTTTCCTAGGGTTGGTCTTTGGTGTTCTAATGTTTTTCTGTACGAGATTA
TTTGGTATTCGTGCACTAACTTCTTTTACAGGAGCCAAGAATATAGAAATTATAAACTCA
GCAAACACTTATATCCAGATTCGAGGCTTGGCATGGCCAGCACTGCTGGTTGGTTGGGTT
GCCCAAAGTGCAAGTCTAGGCATGAAAGATTCATGGGGACCTTTAAAGGCTTTGGCAGTT
GCTACTGTTATTAATGGCATTGGCGACATAGTCTTGTGCAGAGTCTTCAGTTATGGTATT
GCTGGAGCGGCATGGGCAACAATGGTGTCCCAACGTATATGA