Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008744
CDS Infomation

pacid=37447123 polypeptide=PGSC0003DMP400006059 locus=PGSC0003DMG400003393 ID=PGSC0003DMT400008744.v4.03 annot-version=v4.03
Sequence

ATGGACCGGCGGAGTTGGTTGTGGCGGAGGAAGTCGAGTCCTAGTGGTGAAACTGAAAGC
TCTGCTGGATCCATTTCATCCCATTTCTCAGATGATCAGGTTCTTCTGAATCACAACATT
CAATCACCTGAAGTCACATCTAAAACAGCTCCCACCGATGAAGAACTTAATGAAACTGTT
AAGACTCTATCAGCTAAATTATCAGAAGCTCTTGAGACTATCCGCGAGAAGGAAGACTTG
GTAAAGCAACATGCAAAAGTAGCCGAGGAAGCTGTCTCAGGATGGGAGAAGGCTGAAGCG
GAAGTATTGATCCAGAAAAGACTAGTTGAGACAGCAAACCAAAAGAACTCAATCCTTGAA
GAGCGTATCAGTCATCTTGATGGAGCACTTAAAGAGTGTCTGAGACAGCTTCGACAGTCA
AGAGAAGAGCAAGAGCAGAATGTCCAGGTCACTGTGGCCAAGACAAGTTCTGAATGGGAG
TTTAGAAAGTCTGAACTTGAAAATAAGCTTGTTCAGCTCCAGGCTGAACTGCAAAATTCT
AAAGCCAAAGACAGTAACGTCAAAGATCTTCAGTGTAAGCTTGAATATGTGGAGAAACAG
AACTCAATACTCAAGATTGAGCTTGTTTCCATATCTGAGGAGCTCAAATTAATGACATCT
GAAAGAGACTTAAGCACTCATGCTGCTGAAACGGCCAGCAAACAACAACTCGAGAGTATC
AAGAAGGTTGCTAACCTTGAAGCAGAATGCCGTATGCTTAAGGCATTCGTTCGGAAAAAA
TCAGCCGTTAACCACCACAAGTCTAGCGCTTCTTCCTCTGCTTATGTTGAACCTTCCACT
CATAGTTTATCAAATACTGGAGAACAGCTGTCTATAGTCGAAAATGATAGTTGCAACATG
AATGGTTTGGAGCCAAATAATAATTACCAAAACAGTTCTGGCTTCTTGTCTTCTGCTTTA
GTTTCTGAATTGAGTCAATATAATCATGGAAAGCCACATAAAAGAGACCTTATAGCGTCG
TCTCTAGAGATAAATCTGATGGATGATTTTCTTGAGATGGAGAAGCTTGCAGCACGTCCT
GACATAGTGTATGAAAGAAGCAATGGTAGAGGAGCACACATCAGTGAACCCATTTTAAGA
ACTGAACTTGGAGCCACGATTAGTCAGGCAGCTGATGTGGAGAAGTTGGCAATGATGGAG
GAGGAGAAATTGAAATTAGAGATGGAATTAACTCAGTGTCAGGGAGAGCTTAAGATATCT
AAAGAACAATTAGAAGAAACCATGGACAATTTAACTGAAGTAAGAACTCAGTTATCTATG
GAAAATGATGCCAGGAGAAAACTGGAGGCTGAATTCAAGGCTACTATAACCAAGCTTAAA
GACTTAATAGAACATTCACAGAAAATGGAGGCTGAGATTGTCGAGCTCGAAGCAAAGTTA
TCTATGGCAAATGAAACAAAGAAGAAAACTGAGGCAGAAGTCGAGTCTGCCAATACTATG
CTGAAGAATTTAGTTGAACGCTTAGAAGAAGCACAGATTGATGTTGTGGAGCTCCAAGCT
CAGCTCATTACAGCTAATGAAGCAAAAAGAGCTGCTGAGGCTGAAGTTGAGGCTATTAAT
GTGAAGCTTAAGAAATTAGAATTTTGCTTGGAGGAAACTGAAGTCAAGTGTTTAGGGATT
CAAACCCAACTAGAAATGGTGGAAGGAATGAAATCTGGAGTTGAGGCTGAACTTGAAGCT
ATCAATGCAAAGAAATATGTGTCAGAGTCACTACTTAAAGTGACTGAATTGGAGCTTCAA
AGATTGCTTTCTAAAGTTGATTTTCTTCAAGAGGAGCTTTCCGAGGAAAGGGATTTGCAC
CAGAAAACTGCTGCAAAGTTACAGAAACTAGAAATTGATAATTCAGTGAAAAAATCTGCA
TCCCAGCATCAGAAAGGAACTATATTCGGGGAATTTACAATCAATAAGGACAGCGATAAG
ATAAGACTTACATTTAAGTGGGGGAATTTTGGTGTAATTTGTTCTATGTTGCATGCAGCA
TGCACAAATTTACATTCCGGAAACCCTTGTCAGTTGTTTTTCAGTCACGAACAAGTTTTG
TCCGTGTTTCCTCATATTTATATCAATATGTGCATGGCAGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006059
PEP Infomation

pacid=37447123 transcript=PGSC0003DMT400008744 locus=PGSC0003DMG400003393 ID=PGSC0003DMT400008744.v4.03 annot-version=v4.03
Sequence

MDRRSWLWRRKSSPSGETESSAGSISSHFSDDQVLLNHNIQSPEVTSKTAPTDEELNETV
KTLSAKLSEALETIREKEDLVKQHAKVAEEAVSGWEKAEAEVLIQKRLVETANQKNSILE
ERISHLDGALKECLRQLRQSREEQEQNVQVTVAKTSSEWEFRKSELENKLVQLQAELQNS
KAKDSNVKDLQCKLEYVEKQNSILKIELVSISEELKLMTSERDLSTHAAETASKQQLESI
KKVANLEAECRMLKAFVRKKSAVNHHKSSASSSAYVEPSTHSLSNTGEQLSIVENDSCNM
NGLEPNNNYQNSSGFLSSALVSELSQYNHGKPHKRDLIASSLEINLMDDFLEMEKLAARP
DIVYERSNGRGAHISEPILRTELGATISQAADVEKLAMMEEEKLKLEMELTQCQGELKIS
KEQLEETMDNLTEVRTQLSMENDARRKLEAEFKATITKLKDLIEHSQKMEAEIVELEAKL
SMANETKKKTEAEVESANTMLKNLVERLEEAQIDVVELQAQLITANEAKRAAEAEVEAIN
VKLKKLEFCLEETEVKCLGIQTQLEMVEGMKSGVEAELEAINAKKYVSESLLKVTELELQ
RLLSKVDFLQEELSEERDLHQKTAAKLQKLEIDNSVKKSASQHQKGTIFGEFTINKDSDK
IRLTFKWGNFGVICSMLHAACTNLHSGNPCQLFFSHEQVLSVFPHIYINMCMAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400008744
Transcript Infomation

pacid=37447123 locus=PGSC0003DMG400003393 ID=PGSC0003DMT400008744.v4.03 annot-version=v4.03
Sequence

ATGGACCGGCGGAGTTGGTTGTGGCGGAGGAAGTCGAGTCCTAGTGGTGAAACTGAAAGC
TCTGCTGGATCCATTTCATCCCATTTCTCAGATGATCAGGTTCTTCTGAATCACAACATT
CAATCACCTGAAGTCACATCTAAAACAGCTCCCACCGATGAAGAACTTAATGAAACTGTT
AAGACTCTATCAGCTAAATTATCAGAAGCTCTTGAGACTATCCGCGAGAAGGAAGACTTG
GTAAAGCAACATGCAAAAGTAGCCGAGGAAGCTGTCTCAGGATGGGAGAAGGCTGAAGCG
GAAGTATTGATCCAGAAAAGACTAGTTGAGACAGCAAACCAAAAGAACTCAATCCTTGAA
GAGCGTATCAGTCATCTTGATGGAGCACTTAAAGAGTGTCTGAGACAGCTTCGACAGTCA
AGAGAAGAGCAAGAGCAGAATGTCCAGGTCACTGTGGCCAAGACAAGTTCTGAATGGGAG
TTTAGAAAGTCTGAACTTGAAAATAAGCTTGTTCAGCTCCAGGCTGAACTGCAAAATTCT
AAAGCCAAAGACAGTAACGTCAAAGATCTTCAGTGTAAGCTTGAATATGTGGAGAAACAG
AACTCAATACTCAAGATTGAGCTTGTTTCCATATCTGAGGAGCTCAAATTAATGACATCT
GAAAGAGACTTAAGCACTCATGCTGCTGAAACGGCCAGCAAACAACAACTCGAGAGTATC
AAGAAGGTTGCTAACCTTGAAGCAGAATGCCGTATGCTTAAGGCATTCGTTCGGAAAAAA
TCAGCCGTTAACCACCACAAGTCTAGCGCTTCTTCCTCTGCTTATGTTGAACCTTCCACT
CATAGTTTATCAAATACTGGAGAACAGCTGTCTATAGTCGAAAATGATAGTTGCAACATG
AATGGTTTGGAGCCAAATAATAATTACCAAAACAGTTCTGGCTTCTTGTCTTCTGCTTTA
GTTTCTGAATTGAGTCAATATAATCATGGAAAGCCACATAAAAGAGACCTTATAGCGTCG
TCTCTAGAGATAAATCTGATGGATGATTTTCTTGAGATGGAGAAGCTTGCAGCACGTCCT
GACATAGTGTATGAAAGAAGCAATGGTAGAGGAGCACACATCAGTGAACCCATTTTAAGA
ACTGAACTTGGAGCCACGATTAGTCAGGCAGCTGATGTGGAGAAGTTGGCAATGATGGAG
GAGGAGAAATTGAAATTAGAGATGGAATTAACTCAGTGTCAGGGAGAGCTTAAGATATCT
AAAGAACAATTAGAAGAAACCATGGACAATTTAACTGAAGTAAGAACTCAGTTATCTATG
GAAAATGATGCCAGGAGAAAACTGGAGGCTGAATTCAAGGCTACTATAACCAAGCTTAAA
GACTTAATAGAACATTCACAGAAAATGGAGGCTGAGATTGTCGAGCTCGAAGCAAAGTTA
TCTATGGCAAATGAAACAAAGAAGAAAACTGAGGCAGAAGTCGAGTCTGCCAATACTATG
CTGAAGAATTTAGTTGAACGCTTAGAAGAAGCACAGATTGATGTTGTGGAGCTCCAAGCT
CAGCTCATTACAGCTAATGAAGCAAAAAGAGCTGCTGAGGCTGAAGTTGAGGCTATTAAT
GTGAAGCTTAAGAAATTAGAATTTTGCTTGGAGGAAACTGAAGTCAAGTGTTTAGGGATT
CAAACCCAACTAGAAATGGTGGAAGGAATGAAATCTGGAGTTGAGGCTGAACTTGAAGCT
ATCAATGCAAAGAAATATGTGTCAGAGTCACTACTTAAAGTGACTGAATTGGAGCTTCAA
AGATTGCTTTCTAAAGTTGATTTTCTTCAAGAGGAGCTTTCCGAGGAAAGGGATTTGCAC
CAGAAAACTGCTGCAAAGTTACAGAAACTAGAAATTGATAATTCAGTGAAAAAATCTGCA
TCCCAGCATCAGAAAGGAACTATATTCGGGGAATTTACAATCAATAAGGACAGCGATAAG
ATAAGACTTACATTTAAGTGGGGGAATTTTGGTGTAATTTGTTCTATGTTGCATGCAGCA
TGCACAAATTTACATTCCGGAAACCCTTGTCAGTTGTTTTTCAGTCACGAACAAGTTTTG
TCCGTGTTTCCTCATATTTATATCAATATGTGCATGGCAGGATAA