Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008728
CDS Infomation

pacid=37444886 polypeptide=PGSC0003DMP400006052 locus=PGSC0003DMG400003382 ID=PGSC0003DMT400008728.v4.03 annot-version=v4.03
Sequence

ATGGAAAATGTCCATCATCATCATGATCATGATAATATTGGAAATTCCATTCAAAGACCA
AATTTCCCCTTGCAATTGTTAGAAAAAAGAGATCAAGTAGATCATTCAACAATATGTTCA
TCACAAGTTCATCCTTATAATTCCACTTCTTTACACATGATGACTACCTCTAGTAGTGAT
GCACCTTGTGTTGATCATAACCAAAAATCAAAAAATCAAGACAAGAAACAACAAGCAAAA
AAACCAACAACAACAAAAGATAGACACACAAAGGTTGATGGTCGTGGTCGAAGAATTCGT
ATGCCAGCAACATGTGCAGCTAGGGTTTTTCAACTCACTAGAGAATTAGGTCACAAATCT
GATGGTGAAACTATTGAATGGCTCTTACAACAAGCTGAACCTGCTGTTATTGCTGCTACT
GGTACTGGTACTATTCCAGCTAATTATTCATCACTTAATATTTCTTTAAGAAGTTCTAGA
CATCATAGTGCTAGTAACTACCTAGCACATAATAATATTAATAATTTCGGTCATGTTTAT
CATGACCGAAATTATTTTAATGGGGTTGGTTTATTTTCGTCCGAAAATAATTCATTTTTC
CCTAGTGGGAATTTGAACATGTTACAAGCGAAGGAGGAGTTATGTGATGATGATGATGAT
GATAATGATAATAATAATAATACTGGACGAATTAAGCGGAGGTCAGAAGATCAAGACTTA
CTACAAAATAATTACCCTATGAGTAATATGTTACAATCTAGTACTTATGGTTCAATTCCA
GCGAGTCATCAAATTGGGCATATTCCAGCAACAACGTTATATATGATGACAAATAATAAT
AATAATTCTAGTCATCATGACCCTAATAATTGTTCTATGTGGGGATCTTCTAGTAATAAT
AATAATATTGAGAATTCAAATATTAGAGGAGGGTTATTGAATTTTATGAATTTTCATCAA
CCAATTTTGGGGACACGTGGTGGCGGTGGGACGGCGGCAGAAGGGCAATGGGGGATGTTG
ACGGCGGCGATGAACTCGTATAGACAAAGTGGTGGTCATGCTAGTGGTTCTTCTAATCAG
CATAATGGAGGAGATGATCATCAACATCATTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006052
PEP Infomation

pacid=37444886 transcript=PGSC0003DMT400008728 locus=PGSC0003DMG400003382 ID=PGSC0003DMT400008728.v4.03 annot-version=v4.03
Sequence

MENVHHHHDHDNIGNSIQRPNFPLQLLEKRDQVDHSTICSSQVHPYNSTSLHMMTTSSSD
APCVDHNQKSKNQDKKQQAKKPTTTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKS
DGETIEWLLQQAEPAVIAATGTGTIPANYSSLNISLRSSRHHSASNYLAHNNINNFGHVY
HDRNYFNGVGLFSSENNSFFPSGNLNMLQAKEELCDDDDDDNDNNNNTGRIKRRSEDQDL
LQNNYPMSNMLQSSTYGSIPASHQIGHIPATTLYMMTNNNNNSSHHDPNNCSMWGSSSNN
NNIENSNIRGGLLNFMNFHQPILGTRGGGGTAAEGQWGMLTAAMNSYRQSGGHASGSSNQ
HNGGDDHQHHS*

Transcript Sequence

Transcript ID

PGSC0003DMT400008728
Transcript Infomation

pacid=37444886 locus=PGSC0003DMG400003382 ID=PGSC0003DMT400008728.v4.03 annot-version=v4.03
Sequence

ATGGAAAATGTCCATCATCATCATGATCATGATAATATTGGAAATTCCATTCAAAGACCA
AATTTCCCCTTGCAATTGTTAGAAAAAAGAGATCAAGTAGATCATTCAACAATATGTTCA
TCACAAGTTCATCCTTATAATTCCACTTCTTTACACATGATGACTACCTCTAGTAGTGAT
GCACCTTGTGTTGATCATAACCAAAAATCAAAAAATCAAGACAAGAAACAACAAGCAAAA
AAACCAACAACAACAAAAGATAGACACACAAAGGTTGATGGTCGTGGTCGAAGAATTCGT
ATGCCAGCAACATGTGCAGCTAGGGTTTTTCAACTCACTAGAGAATTAGGTCACAAATCT
GATGGTGAAACTATTGAATGGCTCTTACAACAAGCTGAACCTGCTGTTATTGCTGCTACT
GGTACTGGTACTATTCCAGCTAATTATTCATCACTTAATATTTCTTTAAGAAGTTCTAGA
CATCATAGTGCTAGTAACTACCTAGCACATAATAATATTAATAATTTCGGTCATGTTTAT
CATGACCGAAATTATTTTAATGGGGTTGGTTTATTTTCGTCCGAAAATAATTCATTTTTC
CCTAGTGGGAATTTGAACATGTTACAAGCGAAGGAGGAGTTATGTGATGATGATGATGAT
GATAATGATAATAATAATAATACTGGACGAATTAAGCGGAGGTCAGAAGATCAAGACTTA
CTACAAAATAATTACCCTATGAGTAATATGTTACAATCTAGTACTTATGGTTCAATTCCA
GCGAGTCATCAAATTGGGCATATTCCAGCAACAACGTTATATATGATGACAAATAATAAT
AATAATTCTAGTCATCATGACCCTAATAATTGTTCTATGTGGGGATCTTCTAGTAATAAT
AATAATATTGAGAATTCAAATATTAGAGGAGGGTTATTGAATTTTATGAATTTTCATCAA
CCAATTTTGGGGACACGTGGTGGCGGTGGGACGGCGGCAGAAGGGCAATGGGGGATGTTG
ACGGCGGCGATGAACTCGTATAGACAAAGTGGTGGTCATGCTAGTGGTTCTTCTAATCAG
CATAATGGAGGAGATGATCATCAACATCATTCTTGA