Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008722
CDS Infomation

pacid=37444530 polypeptide=PGSC0003DMP400006048 locus=PGSC0003DMG400003380 ID=PGSC0003DMT400008722.v4.03 annot-version=v4.03
Sequence

ATGGAAGTCATCGATGTTTTTGTGGAGAACCTCAATGTTCTAGTGAAGATCAATGATCCA
ATTTCGTGGCTTTTTGTTCCAGAACACAAGGAACAAATAGAACAAGTGTTAAAGGAGTTG
AAGTTATTGAGATTTTTTGTCTGCTTTGTTTCAAACAAATGTATAGAGCCTCAATACCGA
CATACTACTTTTTATATTCATGCTTTAATTGAGGCTAGCCACATTGCAATGGTTGTCTGG
TTGCATTTGCCAGTCGTCTATGGAAATCAAGACGTGGCTCCAAGTGAAGTCAGTCGTTTG
CTCTCTGATTTCATGGAATTGAAGATTAAGTCCATTCAGCCAGTCATCAGCCGCAACAAT
ATTTATATTGATGTCCTGCAAGCTTTGAAGTCAACCATACCACAAGCACAAAAGAAGCAT
GCAGCTGAGAGTAGCACTGTGGAGATTCCAACACACAGTCTGACGGTTGGTTTGAGTGAT
CAAATGGCTAACCTTCAGGAGATGCTCTGCCTTCTAAGAGATAATCTCATTCATCTGCCA
ATACTAGATCTGGAATTTCATCTTCAAGATATGGATTCTGTTATTATTGATGCTGGACTT
CTTATTTACTCATTATATGATATCAAGAGGGAGAAGGAAGACACAGTATTGGATGATATG
AACCGAGCACTTGGTTTTGATCTTCCAAGAAACATTGAGCCTATCAAGGCGATGGTCTAC
CTCATCATGCAAAAGGCATTTCAATGTAACTTGCCAAGGATTCATGGACTAGGCTATGTC
GATTTTCTATTGAAAAACCTGAAGGATTTCCAAGGCCGTTATTCAGATTCACTCGCTTTC
CTCAAGAATCAAATTCAAGTAATTCAAACGGAATTTGAGAGCTTGCAACCTTTCCTGAAG
GTTGTCGTAGAAGAGCCACACAATAAGTTCAAGAGACTGAATGAAGATTGTGCTATACAG
ATAATTAGGAAAGCACATGAGGTGGAATATGTAGTTGATGCTTGTATAAACAAAGGCATT
CCTCATTGGTGCCTCGAGCGTTGGCTCCAGGATATCATAGAGGAGATTACTTGTATCAAA
GCAAAGATTCAGGAAAATAACACTGTTGACGATACAATGAAGACTGTCATTGCTCGTACA
TCATCACAACTGGCAAGGACTCCGAGGATGAATGAAGAAATTGTTGGGTTTGAGGATGTC
ATAGAAAATTTAAGAAAAAAACTACTGAATGGAACCAAAGGGCAAGATGTCATTTCAATT
CATGGCATGCCAGGTTTAGGTAAGACGACTTTAGCCAACAGACTCTATTCTGACAGGTCA
GTTGTTTCTCAATTTGATATTTGTGCACAATGTTGTGTGTCTCAAGTATATTCGTATAAG
GACTTGTTATTGTCCTTGATACGTGATGCTATTGGTGAGGATTCTGATCAGCATAGAGAA
CTTCATGACAATGAATTAGCTGATAAGCTTCGCAAAACCTTATTGCGCAGAAGGTACCTT
ATCCTTGTTGATGATGTGTGGGAAAATAGTGTTTGGGATGATTTAAGAGGTTGTTTTCCA
GATGCCAATAACAGAAGCAGAATCATTCTAACGACAAGACATCATGAAGTTGCCAAATTT
GCTAGTGTTCATAGTGATCCCCTTCATCTTCGTATGTTTGACGAAGATGAAAGTTGGAAG
TTGCTTGAAAAGAAAGTGTTTGGTGAACAAAGCTGCTCCCCTCTCCTAAGAGATGTTGGG
CTAAGAATAGCAAAAATGTGTGGACAACTCCCTCTTTCAATTGTTTTGGTGGCTGGTATT
CTGTCAGAGATGAAAAAGGAAGTAGAATGTTGGGAGCAAGTGGCCAACAATTTGGGTACC
CACATTCACAATGACTCAAGAGCCATTGTAGACCAAAGTTATCATGTTTTACCCTGTCAT
CTTAAGTCTTGCTTCCTTTATTTTGGAGCATTTTTAGAGGATAGAGTGATTGATATTTCA
AGGTTAATAAGGTTATGGATATCAGAATCATTTATAAAAAGTTGTGAAGGCAGGAGGTTG
GAGGATATAGCAGAAGGTTACTTGGAGAATCTTATTGAAAGAAATCTAGTAATGGTTACT
CAAAGGGCCGATTCAGATGGTAAGGTCACAGCATGTCGCCTTCATGATGTACTACTCGAC
TTCTGCAAGGAAAGAGCAGCTGAGGAGAATTTTCTACTATGGATAAAACGAGATCAGATT
ACCAAAGCTGTTTACTCTCACAAGCAGCATGCTCACTTGGCGTTCACTGAAATGGATAAT
CTTTTAGAATGGAGTACGTCTGGCTCACTTGTTGGCTCTGTACTTTTTAAGAATTATGAC
CAATACTTTGCCGATCGTCCCTTTTTCTCTCATGCTTTTGAAATTTCACACATTTTACCA
CATTTCAAGTTTCTAAAAGTACTGGATTTGGAACACCAGGTTGTTATTGATTTTATTCCG
ACTGAGCTCCCTTACTTGAGGTATTTCTCTGCGCTCATTGATCAGAATTCAATTCCTTCA
AGCATATCCAATCTTTGGAACCTTGAAACTCTTATATTAAAGCGTAGATCAGCTGCCAGA
TATAACAGGGTATTACTACCTAGTACAGTTTGGGATATGGTTAAATTGAGATATCTGTAT
ATTCCTTACTTCAGCCCTGAAATAAAAAGCATTACTCGAGAACTCTCCAAAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006048
PEP Infomation

pacid=37444530 transcript=PGSC0003DMT400008722 locus=PGSC0003DMG400003380 ID=PGSC0003DMT400008722.v4.03 annot-version=v4.03
Sequence

MEVIDVFVENLNVLVKINDPISWLFVPEHKEQIEQVLKELKLLRFFVCFVSNKCIEPQYR
HTTFYIHALIEASHIAMVVWLHLPVVYGNQDVAPSEVSRLLSDFMELKIKSIQPVISRNN
IYIDVLQALKSTIPQAQKKHAAESSTVEIPTHSLTVGLSDQMANLQEMLCLLRDNLIHLP
ILDLEFHLQDMDSVIIDAGLLIYSLYDIKREKEDTVLDDMNRALGFDLPRNIEPIKAMVY
LIMQKAFQCNLPRIHGLGYVDFLLKNLKDFQGRYSDSLAFLKNQIQVIQTEFESLQPFLK
VVVEEPHNKFKRLNEDCAIQIIRKAHEVEYVVDACINKGIPHWCLERWLQDIIEEITCIK
AKIQENNTVDDTMKTVIARTSSQLARTPRMNEEIVGFEDVIENLRKKLLNGTKGQDVISI
HGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKDLLLSLIRDAIGEDSDQHRE
LHDNELADKLRKTLLRRRYLILVDDVWENSVWDDLRGCFPDANNRSRIILTTRHHEVAKF
ASVHSDPLHLRMFDEDESWKLLEKKVFGEQSCSPLLRDVGLRIAKMCGQLPLSIVLVAGI
LSEMKKEVECWEQVANNLGTHIHNDSRAIVDQSYHVLPCHLKSCFLYFGAFLEDRVIDIS
RLIRLWISESFIKSCEGRRLEDIAEGYLENLIERNLVMVTQRADSDGKVTACRLHDVLLD
FCKERAAEENFLLWIKRDQITKAVYSHKQHAHLAFTEMDNLLEWSTSGSLVGSVLFKNYD
QYFADRPFFSHAFEISHILPHFKFLKVLDLEHQVVIDFIPTELPYLRYFSALIDQNSIPS
SISNLWNLETLILKRRSAARYNRVLLPSTVWDMVKLRYLYIPYFSPEIKSITRELSKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400008722
Transcript Infomation

pacid=37444530 locus=PGSC0003DMG400003380 ID=PGSC0003DMT400008722.v4.03 annot-version=v4.03
Sequence

ATGGAAGTCATCGATGTTTTTGTGGAGAACCTCAATGTTCTAGTGAAGATCAATGATCCA
ATTTCGTGGCTTTTTGTTCCAGAACACAAGGAACAAATAGAACAAGTGTTAAAGGAGTTG
AAGTTATTGAGATTTTTTGTCTGCTTTGTTTCAAACAAATGTATAGAGCCTCAATACCGA
CATACTACTTTTTATATTCATGCTTTAATTGAGGCTAGCCACATTGCAATGGTTGTCTGG
TTGCATTTGCCAGTCGTCTATGGAAATCAAGACGTGGCTCCAAGTGAAGTCAGTCGTTTG
CTCTCTGATTTCATGGAATTGAAGATTAAGTCCATTCAGCCAGTCATCAGCCGCAACAAT
ATTTATATTGATGTCCTGCAAGCTTTGAAGTCAACCATACCACAAGCACAAAAGAAGCAT
GCAGCTGAGAGTAGCACTGTGGAGATTCCAACACACAGTCTGACGGTTGGTTTGAGTGAT
CAAATGGCTAACCTTCAGGAGATGCTCTGCCTTCTAAGAGATAATCTCATTCATCTGCCA
ATACTAGATCTGGAATTTCATCTTCAAGATATGGATTCTGTTATTATTGATGCTGGACTT
CTTATTTACTCATTATATGATATCAAGAGGGAGAAGGAAGACACAGTATTGGATGATATG
AACCGAGCACTTGGTTTTGATCTTCCAAGAAACATTGAGCCTATCAAGGCGATGGTCTAC
CTCATCATGCAAAAGGCATTTCAATGTAACTTGCCAAGGATTCATGGACTAGGCTATGTC
GATTTTCTATTGAAAAACCTGAAGGATTTCCAAGGCCGTTATTCAGATTCACTCGCTTTC
CTCAAGAATCAAATTCAAGTAATTCAAACGGAATTTGAGAGCTTGCAACCTTTCCTGAAG
GTTGTCGTAGAAGAGCCACACAATAAGTTCAAGAGACTGAATGAAGATTGTGCTATACAG
ATAATTAGGAAAGCACATGAGGTGGAATATGTAGTTGATGCTTGTATAAACAAAGGCATT
CCTCATTGGTGCCTCGAGCGTTGGCTCCAGGATATCATAGAGGAGATTACTTGTATCAAA
GCAAAGATTCAGGAAAATAACACTGTTGACGATACAATGAAGACTGTCATTGCTCGTACA
TCATCACAACTGGCAAGGACTCCGAGGATGAATGAAGAAATTGTTGGGTTTGAGGATGTC
ATAGAAAATTTAAGAAAAAAACTACTGAATGGAACCAAAGGGCAAGATGTCATTTCAATT
CATGGCATGCCAGGTTTAGGTAAGACGACTTTAGCCAACAGACTCTATTCTGACAGGTCA
GTTGTTTCTCAATTTGATATTTGTGCACAATGTTGTGTGTCTCAAGTATATTCGTATAAG
GACTTGTTATTGTCCTTGATACGTGATGCTATTGGTGAGGATTCTGATCAGCATAGAGAA
CTTCATGACAATGAATTAGCTGATAAGCTTCGCAAAACCTTATTGCGCAGAAGGTACCTT
ATCCTTGTTGATGATGTGTGGGAAAATAGTGTTTGGGATGATTTAAGAGGTTGTTTTCCA
GATGCCAATAACAGAAGCAGAATCATTCTAACGACAAGACATCATGAAGTTGCCAAATTT
GCTAGTGTTCATAGTGATCCCCTTCATCTTCGTATGTTTGACGAAGATGAAAGTTGGAAG
TTGCTTGAAAAGAAAGTGTTTGGTGAACAAAGCTGCTCCCCTCTCCTAAGAGATGTTGGG
CTAAGAATAGCAAAAATGTGTGGACAACTCCCTCTTTCAATTGTTTTGGTGGCTGGTATT
CTGTCAGAGATGAAAAAGGAAGTAGAATGTTGGGAGCAAGTGGCCAACAATTTGGGTACC
CACATTCACAATGACTCAAGAGCCATTGTAGACCAAAGTTATCATGTTTTACCCTGTCAT
CTTAAGTCTTGCTTCCTTTATTTTGGAGCATTTTTAGAGGATAGAGTGATTGATATTTCA
AGGTTAATAAGGTTATGGATATCAGAATCATTTATAAAAAGTTGTGAAGGCAGGAGGTTG
GAGGATATAGCAGAAGGTTACTTGGAGAATCTTATTGAAAGAAATCTAGTAATGGTTACT
CAAAGGGCCGATTCAGATGGTAAGGTCACAGCATGTCGCCTTCATGATGTACTACTCGAC
TTCTGCAAGGAAAGAGCAGCTGAGGAGAATTTTCTACTATGGATAAAACGAGATCAGATT
ACCAAAGCTGTTTACTCTCACAAGCAGCATGCTCACTTGGCGTTCACTGAAATGGATAAT
CTTTTAGAATGGAGTACGTCTGGCTCACTTGTTGGCTCTGTACTTTTTAAGAATTATGAC
CAATACTTTGCCGATCGTCCCTTTTTCTCTCATGCTTTTGAAATTTCACACATTTTACCA
CATTTCAAGTTTCTAAAAGTACTGGATTTGGAACACCAGGTTGTTATTGATTTTATTCCG
ACTGAGCTCCCTTACTTGAGGTATTTCTCTGCGCTCATTGATCAGAATTCAATTCCTTCA
AGCATATCCAATCTTTGGAACCTTGAAACTCTTATATTAAAGCGTAGATCAGCTGCCAGA
TATAACAGGGTATTACTACCTAGTACAGTTTGGGATATGGTTAAATTGAGATATCTGTAT
ATTCCTTACTTCAGCCCTGAAATAAAAAGCATTACTCGAGAACTCTCCAAAACTTGA