Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008676
CDS Infomation

pacid=37461720 polypeptide=PGSC0003DMP400006023 locus=PGSC0003DMG400003363 ID=PGSC0003DMT400008676.v4.03 annot-version=v4.03
Sequence

ATGGGCCTTCTCTTGATTGAGAAAAAGGAGTGGTCTGCTAAGCTTGAAGAAATTAAGCAA
GCCTTAAATGAAGCAAATGAGGCCTACAGAAGAGAACATACTGCCCACTTAATTGCTCTG
TCTGAAGTGGAGAAACGAGAGGAGAATTTGAGGAAGGCATTGGGTGTTGAGAACCAATGT
GTGCGTGAGTTAGAGAAGGAATTGCGTGAGATGCGCTCTCAGTATGCAGAGACCAAGTAT
GTAGCTGATTCGAAATTAGATGAGGCAAAGGCATTGGCTACTAGTGTTGAAGAGAATTCA
CTACATGTAGAACTGAAATTGCGTGCAGCTGATGCCAAGACCGCTGAGGTGAGTAGAAAA
AGTTCAGATATTGAGAGGAAACTACGTGATATTGAGGCTCAAGAAAATGCACTTAGAAGA
GAACGGTCCTCTTTCAATACCGAGCGTGAAGCTCATGAGAGTGCTCTATCTAAACACAGA
GAAGAGTTGCGAGAATGGGAAAGAAAACTAAAGGAAGGAGAGGAGAGGCTGGCTGATGCC
CGAACATTGCTTAACCAAAGAGAGCAGCGAGCAAATGAGAATGACAGCATTCTGAGGCAA
AAGCAGAGTGACCTGGAAGATGAGCAGAGGAAGATTGACACAGCTAACTCCGTTTTGAGG
AAGAAAGAAGTTGACATGAGCAGCCGACTAGCCAACCTTGCTTCTACGGAGAAGGAACTT
GAGGATGTGAGAAAGAGCCTGGAGATAAAAAAGGAAGAATTAGATGAACTACAGGAAAAG
CTAAATGCAAAAGAAAGAGAGGAAATTCAAAAGCTAATGGATGAACATATAGCTATCCTG
AAATCTAAGGAGGAGGAGTTTGAATTAGAGATGAGGCAGAGGCATGCATCACTAGATGAG
GAGCTGAAAAACAAGGTGATTGAACTGGAGAAGAAGGAGGCGGAAGTTAGTCACGTTGAA
GAAAAACTCAAAAAACGCGAACAGGCACTTGAAAAGAAAAGTGACAAAATGAAAGAGAAG
GAAAAGGATCTTGAATTGAAGCTGAAAGCATTAAAAGAAAGGGAGAAGTCTCTGAAAATT
GATGAGAAAGAATTGGAAACTGAAAAGAAGCAGATATTTACTGAGAAGGATCGTTTACTG
GCTTTAAGGGTTGAACTTGAGAACAGAAGAGCTGAACTTGAAAAACAACAGCTCAAGATT
AACGAGGGAATTGAGCAGCTAAAAATAACTGAAGATGAGAAAATGGAACATGCTCGCCTT
CAATCAGAACTGAAGCAGGAGATCGACAAGTGCAGAGATTTACGAGACACTCTTTTGAAG
GAAGCTGAAGATTTAAAGCAGGAAAAAGAGAGATTTGAGAGAGAATGGGAAGAGCTGGAT
GAGAAAAGATCTGCGATCAAGAAGGAGTTGCAGGAAGTTAATGATTCAAAAAAGAAATTT
GAGAAACTGCAGCACACTGAAGAGGAAAGGTTGAAGAAGGAGAAACTGGAAACAGAAAAT
TATGTTCAGAGAGAGTTGGAAGCCCTTAAAGCGGCACAAGAGACATTTGCAGCTACAATG
GATCATGAGAGATCAGTATTATCTGAGAAAACTCAAAGTGAGAAGATCCGAATGCTTCAT
GATTTCGAAAACCAAAAACGAGATCTTGAGAGTGAAATGCAGCGGAAGCGGGAGGAAATG
GAATTTGCGCTGCATGAGCAGAAGAAACGCTTTGAGGAAGAGAGGCAGAGGGAACTCAGC
AATGCTAACTATTTAAGGGAAGTAGCCCATAAGGAAATGGAAGTGATGAAGTCAGAAAGA
GTCAAGCTGGAGAAAGAAAAACAGGAAATTTCATCAAACAAGATGCATCTGGCGGAACAA
CAGTCAGAGATGAAAAAGGACATTGATGTGCTCGATGGTTTAAGCAGGAAGTTGAAGGAT
CAAAGGGAAGCTTTTGCAAAAGAAAGGGAGAGGTTTCTTACTTTTGTCAAGAAGCAGGAG
AATTGCAGCTCATGTGGAGAGGGGATTCGTATATTTGAGCTTTCTGAACTTCAAACTCTA
AATGATGTGGTGGATTTTGAGGCCCCTTCCCTGCGAAATGTTGCACAGGAATATTTAACT
GATGGTTTCCAGGACACACCTGGAAGGGCTAACAATGAGTTGTCCCCTGGTGCTCTTAAT
TCAGGATCTATGGCTTCTGCTGGAACCATGTCCTGGCTTCGCAAATGTACAACAAAGCTT
CTGAAGTTTTCACCAGGTAATAAAATTGAGCATCCTGCATCTCAAGATTTCATTGGCGGA
TCTTCTCTGGAAGAGAAATTTGTAGGTGAATTACCTGATACTATGTCGAAAAAAGATCAA
GTAGATCTGGCTGTCTCTATCAACGGCACATTTGATGACCAAAAACTTCAAACAGATAAC
AGTGTTAGAGTGGTGGAAGTTGGCCAAGATGTTCCTGAAGACTCTCAGCATTCGAACATA
AATAGCCAGCGCAGACCCGTCAGGAAAGGGCGTGGTAAAAACAGTAAGACAGGTCACCCT
AATTCAAAAGCTACAAGTGCAAAAATTATCCTTGGAGAAAATCTCAAGGAGTCTGAGAAT
ACGCACGTCAATGGAGGTTTGGAGACCTCAATTAATGTGAATGAGAGCCAGAAAGAAGAA
TCTAGTCTCTTTGGTGAAGCGCGAAGTAAGACCAGAAAGCGTACTCGCATCCATGGAACA
GCAAGTGAGTTTGATGGAAGTCATAGTGATGGACAGTCAGATAGTGTGACAGCCACCAGC
AGGAGGAAGAGGAGACAAAAGGCTGCCCCGTCTGTGCAGGCTCCTGGTGAAAAAAGATAC
AATCTCCGCCGTCCCAGAAGTGCTGCTATAGCAACAGCTAATGGATCCTTGCCAGAGCTG
GTCTCAAAATCTCAGGAAGAAAATGGGGACTCCAAAGCCGTGCCAGAAACTCCTGCAGCC
ATCAGTGATGGAGAACTCAGAAACTCTGATGCTGCTCTTCCCGCTGTAGCCGATAGCCCT
TTGATGGAAGCAGCAGATGATCAGGGATGCACTGCTGATATAGCTAATGAATTGGTAGAT
GATACGGGTTTAAGTGAAGAAATGAATGGAACACCAGAAGGACCCTCAGCTTACAATGTC
TACGACGAGGAACATGAAGGTGACACCATTGTGCAAGAAGATGGAGAACGAGATGAGGAT
GCTGATGAGAACGATGAAGTAGACAAGGGCAACGAGGAGGAAGAGGTTCTACATCCTGGT
GAAGTCTCAATAGGGAAGAAGATTTGGAGTTTCATCACCACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400006023
PEP Infomation

pacid=37461720 transcript=PGSC0003DMT400008676 locus=PGSC0003DMG400003363 ID=PGSC0003DMT400008676.v4.03 annot-version=v4.03
Sequence

MGLLLIEKKEWSAKLEEIKQALNEANEAYRREHTAHLIALSEVEKREENLRKALGVENQC
VRELEKELREMRSQYAETKYVADSKLDEAKALATSVEENSLHVELKLRAADAKTAEVSRK
SSDIERKLRDIEAQENALRRERSSFNTEREAHESALSKHREELREWERKLKEGEERLADA
RTLLNQREQRANENDSILRQKQSDLEDEQRKIDTANSVLRKKEVDMSSRLANLASTEKEL
EDVRKSLEIKKEELDELQEKLNAKEREEIQKLMDEHIAILKSKEEEFELEMRQRHASLDE
ELKNKVIELEKKEAEVSHVEEKLKKREQALEKKSDKMKEKEKDLELKLKALKEREKSLKI
DEKELETEKKQIFTEKDRLLALRVELENRRAELEKQQLKINEGIEQLKITEDEKMEHARL
QSELKQEIDKCRDLRDTLLKEAEDLKQEKERFEREWEELDEKRSAIKKELQEVNDSKKKF
EKLQHTEEERLKKEKLETENYVQRELEALKAAQETFAATMDHERSVLSEKTQSEKIRMLH
DFENQKRDLESEMQRKREEMEFALHEQKKRFEEERQRELSNANYLREVAHKEMEVMKSER
VKLEKEKQEISSNKMHLAEQQSEMKKDIDVLDGLSRKLKDQREAFAKERERFLTFVKKQE
NCSSCGEGIRIFELSELQTLNDVVDFEAPSLRNVAQEYLTDGFQDTPGRANNELSPGALN
SGSMASAGTMSWLRKCTTKLLKFSPGNKIEHPASQDFIGGSSLEEKFVGELPDTMSKKDQ
VDLAVSINGTFDDQKLQTDNSVRVVEVGQDVPEDSQHSNINSQRRPVRKGRGKNSKTGHP
NSKATSAKIILGENLKESENTHVNGGLETSINVNESQKEESSLFGEARSKTRKRTRIHGT
ASEFDGSHSDGQSDSVTATSRRKRRQKAAPSVQAPGEKRYNLRRPRSAAIATANGSLPEL
VSKSQEENGDSKAVPETPAAISDGELRNSDAALPAVADSPLMEAADDQGCTADIANELVD
DTGLSEEMNGTPEGPSAYNVYDEEHEGDTIVQEDGERDEDADENDEVDKGNEEEEVLHPG
EVSIGKKIWSFITT*

Transcript Sequence

Transcript ID

PGSC0003DMT400008676
Transcript Infomation

pacid=37461720 locus=PGSC0003DMG400003363 ID=PGSC0003DMT400008676.v4.03 annot-version=v4.03
Sequence

ATGGGCCTTCTCTTGATTGAGAAAAAGGAGTGGTCTGCTAAGCTTGAAGAAATTAAGCAA
GCCTTAAATGAAGCAAATGAGGCCTACAGAAGAGAACATACTGCCCACTTAATTGCTCTG
TCTGAAGTGGAGAAACGAGAGGAGAATTTGAGGAAGGCATTGGGTGTTGAGAACCAATGT
GTGCGTGAGTTAGAGAAGGAATTGCGTGAGATGCGCTCTCAGTATGCAGAGACCAAGTAT
GTAGCTGATTCGAAATTAGATGAGGCAAAGGCATTGGCTACTAGTGTTGAAGAGAATTCA
CTACATGTAGAACTGAAATTGCGTGCAGCTGATGCCAAGACCGCTGAGGTGAGTAGAAAA
AGTTCAGATATTGAGAGGAAACTACGTGATATTGAGGCTCAAGAAAATGCACTTAGAAGA
GAACGGTCCTCTTTCAATACCGAGCGTGAAGCTCATGAGAGTGCTCTATCTAAACACAGA
GAAGAGTTGCGAGAATGGGAAAGAAAACTAAAGGAAGGAGAGGAGAGGCTGGCTGATGCC
CGAACATTGCTTAACCAAAGAGAGCAGCGAGCAAATGAGAATGACAGCATTCTGAGGCAA
AAGCAGAGTGACCTGGAAGATGAGCAGAGGAAGATTGACACAGCTAACTCCGTTTTGAGG
AAGAAAGAAGTTGACATGAGCAGCCGACTAGCCAACCTTGCTTCTACGGAGAAGGAACTT
GAGGATGTGAGAAAGAGCCTGGAGATAAAAAAGGAAGAATTAGATGAACTACAGGAAAAG
CTAAATGCAAAAGAAAGAGAGGAAATTCAAAAGCTAATGGATGAACATATAGCTATCCTG
AAATCTAAGGAGGAGGAGTTTGAATTAGAGATGAGGCAGAGGCATGCATCACTAGATGAG
GAGCTGAAAAACAAGGTGATTGAACTGGAGAAGAAGGAGGCGGAAGTTAGTCACGTTGAA
GAAAAACTCAAAAAACGCGAACAGGCACTTGAAAAGAAAAGTGACAAAATGAAAGAGAAG
GAAAAGGATCTTGAATTGAAGCTGAAAGCATTAAAAGAAAGGGAGAAGTCTCTGAAAATT
GATGAGAAAGAATTGGAAACTGAAAAGAAGCAGATATTTACTGAGAAGGATCGTTTACTG
GCTTTAAGGGTTGAACTTGAGAACAGAAGAGCTGAACTTGAAAAACAACAGCTCAAGATT
AACGAGGGAATTGAGCAGCTAAAAATAACTGAAGATGAGAAAATGGAACATGCTCGCCTT
CAATCAGAACTGAAGCAGGAGATCGACAAGTGCAGAGATTTACGAGACACTCTTTTGAAG
GAAGCTGAAGATTTAAAGCAGGAAAAAGAGAGATTTGAGAGAGAATGGGAAGAGCTGGAT
GAGAAAAGATCTGCGATCAAGAAGGAGTTGCAGGAAGTTAATGATTCAAAAAAGAAATTT
GAGAAACTGCAGCACACTGAAGAGGAAAGGTTGAAGAAGGAGAAACTGGAAACAGAAAAT
TATGTTCAGAGAGAGTTGGAAGCCCTTAAAGCGGCACAAGAGACATTTGCAGCTACAATG
GATCATGAGAGATCAGTATTATCTGAGAAAACTCAAAGTGAGAAGATCCGAATGCTTCAT
GATTTCGAAAACCAAAAACGAGATCTTGAGAGTGAAATGCAGCGGAAGCGGGAGGAAATG
GAATTTGCGCTGCATGAGCAGAAGAAACGCTTTGAGGAAGAGAGGCAGAGGGAACTCAGC
AATGCTAACTATTTAAGGGAAGTAGCCCATAAGGAAATGGAAGTGATGAAGTCAGAAAGA
GTCAAGCTGGAGAAAGAAAAACAGGAAATTTCATCAAACAAGATGCATCTGGCGGAACAA
CAGTCAGAGATGAAAAAGGACATTGATGTGCTCGATGGTTTAAGCAGGAAGTTGAAGGAT
CAAAGGGAAGCTTTTGCAAAAGAAAGGGAGAGGTTTCTTACTTTTGTCAAGAAGCAGGAG
AATTGCAGCTCATGTGGAGAGGGGATTCGTATATTTGAGCTTTCTGAACTTCAAACTCTA
AATGATGTGGTGGATTTTGAGGCCCCTTCCCTGCGAAATGTTGCACAGGAATATTTAACT
GATGGTTTCCAGGACACACCTGGAAGGGCTAACAATGAGTTGTCCCCTGGTGCTCTTAAT
TCAGGATCTATGGCTTCTGCTGGAACCATGTCCTGGCTTCGCAAATGTACAACAAAGCTT
CTGAAGTTTTCACCAGGTAATAAAATTGAGCATCCTGCATCTCAAGATTTCATTGGCGGA
TCTTCTCTGGAAGAGAAATTTGTAGGTGAATTACCTGATACTATGTCGAAAAAAGATCAA
GTAGATCTGGCTGTCTCTATCAACGGCACATTTGATGACCAAAAACTTCAAACAGATAAC
AGTGTTAGAGTGGTGGAAGTTGGCCAAGATGTTCCTGAAGACTCTCAGCATTCGAACATA
AATAGCCAGCGCAGACCCGTCAGGAAAGGGCGTGGTAAAAACAGTAAGACAGGTCACCCT
AATTCAAAAGCTACAAGTGCAAAAATTATCCTTGGAGAAAATCTCAAGGAGTCTGAGAAT
ACGCACGTCAATGGAGGTTTGGAGACCTCAATTAATGTGAATGAGAGCCAGAAAGAAGAA
TCTAGTCTCTTTGGTGAAGCGCGAAGTAAGACCAGAAAGCGTACTCGCATCCATGGAACA
GCAAGTGAGTTTGATGGAAGTCATAGTGATGGACAGTCAGATAGTGTGACAGCCACCAGC
AGGAGGAAGAGGAGACAAAAGGCTGCCCCGTCTGTGCAGGCTCCTGGTGAAAAAAGATAC
AATCTCCGCCGTCCCAGAAGTGCTGCTATAGCAACAGCTAATGGATCCTTGCCAGAGCTG
GTCTCAAAATCTCAGGAAGAAAATGGGGACTCCAAAGCCGTGCCAGAAACTCCTGCAGCC
ATCAGTGATGGAGAACTCAGAAACTCTGATGCTGCTCTTCCCGCTGTAGCCGATAGCCCT
TTGATGGAAGCAGCAGATGATCAGGGATGCACTGCTGATATAGCTAATGAATTGGTAGAT
GATACGGGTTTAAGTGAAGAAATGAATGGAACACCAGAAGGACCCTCAGCTTACAATGTC
TACGACGAGGAACATGAAGGTGACACCATTGTGCAAGAAGATGGAGAACGAGATGAGGAT
GCTGATGAGAACGATGAAGTAGACAAGGGCAACGAGGAGGAAGAGGTTCTACATCCTGGT
GAAGTCTCAATAGGGAAGAAGATTTGGAGTTTCATCACCACATAG