Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008664
CDS Infomation

pacid=37448510 polypeptide=PGSC0003DMP400006014 locus=PGSC0003DMG400003358 ID=PGSC0003DMT400008664.v4.03 annot-version=v4.03
Sequence

ATGTCTCCATTGAATCGCAAAGGTTCAATATTAATAAAACCAAATCTTGTAGCTTTGATA
ACTTCAACTTTGATAGTATTCTACATATTTTCTACTTCAAGATTAATTCTCCTACATCCT
CAACAAACATGGATTCACAATTTAGATTCATCACCAAAACTAAGAGATTTTTTTGTTGAT
CATCATAATAAGCCTAAACAAGATGAAGATACTCATGTTTTATTAGCAAATACTAGCACT
ACTTTGCCTTTTCCAGAACCATTTCCAATTACTAACGCCCATGATCACCATCATTTACCT
AAGCCAAAGCTTCAACTTGGCTCTTCAAGAGAAAAAAAGGTAGAGATGAAGAAAGAGATT
TTTCATGACAAGGATGTATTCAATGAAGAATACAAGGAAATGAATAGAAGCCTAAAGATA
TATGTATATCCCCATAAGAAGAATGAGCCTTTTGCTAATATTTTATTAGCAATTGATGAT
GAACCATCAGGGAACTATGCAAGTGAGAGTTATTTCAAGAAATCCCTTTTTAAAAGTCAT
TTCATCACAAAAGACCCCAAAGAAGCTGATCTTTTTTATCTTCCATTTTCTATAACAAAT
ATGAGAAATGACAAGAGGGTAGGGGTTGGTGGAATCCAAGATTTTGTCAAAGAATATGTA
GTTGAGATAAGTGAAAAATACCCTTATTGGAATAGGTCAGGAGGGGCTGACCATTTCTAT
GTTGCTTGTCATTCTATTGGAAGGTCAGCAATGGAGAAAGCTATTCATGTTAAGTTAAAT
GCAATCCAAGTTGTTTGCTCTTCAAGTTACTTTCTATCTGGTTATCTTCCTCATAAAGAT
GCTTCCATTCCTCAAATTTGGCCTAGAAAAGGACCATCCCCTACAAATGCTCCTTCGCGG
AGGAAAAAGTTAGCTTTTTTCGCGGGAGCAATGAACTCGAGAGTACGTGAAAACCTGGTT
GAAACATGGAGTAATGATTCAGAGATCATAGTCCACCGCGGCCGCATGAAAACACCATAC
TCAGAGGCGTTATTGGACAGTAAATACTGCATTCACGCTAAAGGTTTTGAGATTAACACT
GCACGAATTGGTGACGCTATTTACTACGGTTGTGTTCCAGTCATATTGTCTGACCATTAT
GATCTCCCATACGCTGACATTCTTAATTGGGAAAGTTTCGCCGTCATTGTTTCATCCCTT
GATATTCCAAAACTAAAGCAAATTCTTCAAGCAATAGAGTACCATCACTACGTCAAGCTT
CAAAACAATGTAATGCAGGTGAAAAAGCATTTTCAATGGAACTCTTTTTCCAAAGATTTT
GATATTTTTCATATGGTTATGTATGAGTTGTGGATTCGACGAAGTCATTTGCGACACATC
TACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006014
PEP Infomation

pacid=37448510 transcript=PGSC0003DMT400008664 locus=PGSC0003DMG400003358 ID=PGSC0003DMT400008664.v4.03 annot-version=v4.03
Sequence

MSPLNRKGSILIKPNLVALITSTLIVFYIFSTSRLILLHPQQTWIHNLDSSPKLRDFFVD
HHNKPKQDEDTHVLLANTSTTLPFPEPFPITNAHDHHHLPKPKLQLGSSREKKVEMKKEI
FHDKDVFNEEYKEMNRSLKIYVYPHKKNEPFANILLAIDDEPSGNYASESYFKKSLFKSH
FITKDPKEADLFYLPFSITNMRNDKRVGVGGIQDFVKEYVVEISEKYPYWNRSGGADHFY
VACHSIGRSAMEKAIHVKLNAIQVVCSSSYFLSGYLPHKDASIPQIWPRKGPSPTNAPSR
RKKLAFFAGAMNSRVRENLVETWSNDSEIIVHRGRMKTPYSEALLDSKYCIHAKGFEINT
ARIGDAIYYGCVPVILSDHYDLPYADILNWESFAVIVSSLDIPKLKQILQAIEYHHYVKL
QNNVMQVKKHFQWNSFSKDFDIFHMVMYELWIRRSHLRHIY*

Transcript Sequence

Transcript ID

PGSC0003DMT400008664
Transcript Infomation

pacid=37448510 locus=PGSC0003DMG400003358 ID=PGSC0003DMT400008664.v4.03 annot-version=v4.03
Sequence

ATGTCTCCATTGAATCGCAAAGGTTCAATATTAATAAAACCAAATCTTGTAGCTTTGATA
ACTTCAACTTTGATAGTATTCTACATATTTTCTACTTCAAGATTAATTCTCCTACATCCT
CAACAAACATGGATTCACAATTTAGATTCATCACCAAAACTAAGAGATTTTTTTGTTGAT
CATCATAATAAGCCTAAACAAGATGAAGATACTCATGTTTTATTAGCAAATACTAGCACT
ACTTTGCCTTTTCCAGAACCATTTCCAATTACTAACGCCCATGATCACCATCATTTACCT
AAGCCAAAGCTTCAACTTGGCTCTTCAAGAGAAAAAAAGGTAGAGATGAAGAAAGAGATT
TTTCATGACAAGGATGTATTCAATGAAGAATACAAGGAAATGAATAGAAGCCTAAAGATA
TATGTATATCCCCATAAGAAGAATGAGCCTTTTGCTAATATTTTATTAGCAATTGATGAT
GAACCATCAGGGAACTATGCAAGTGAGAGTTATTTCAAGAAATCCCTTTTTAAAAGTCAT
TTCATCACAAAAGACCCCAAAGAAGCTGATCTTTTTTATCTTCCATTTTCTATAACAAAT
ATGAGAAATGACAAGAGGGTAGGGGTTGGTGGAATCCAAGATTTTGTCAAAGAATATGTA
GTTGAGATAAGTGAAAAATACCCTTATTGGAATAGGTCAGGAGGGGCTGACCATTTCTAT
GTTGCTTGTCATTCTATTGGAAGGTCAGCAATGGAGAAAGCTATTCATGTTAAGTTAAAT
GCAATCCAAGTTGTTTGCTCTTCAAGTTACTTTCTATCTGGTTATCTTCCTCATAAAGAT
GCTTCCATTCCTCAAATTTGGCCTAGAAAAGGACCATCCCCTACAAATGCTCCTTCGCGG
AGGAAAAAGTTAGCTTTTTTCGCGGGAGCAATGAACTCGAGAGTACGTGAAAACCTGGTT
GAAACATGGAGTAATGATTCAGAGATCATAGTCCACCGCGGCCGCATGAAAACACCATAC
TCAGAGGCGTTATTGGACAGTAAATACTGCATTCACGCTAAAGGTTTTGAGATTAACACT
GCACGAATTGGTGACGCTATTTACTACGGTTGTGTTCCAGTCATATTGTCTGACCATTAT
GATCTCCCATACGCTGACATTCTTAATTGGGAAAGTTTCGCCGTCATTGTTTCATCCCTT
GATATTCCAAAACTAAAGCAAATTCTTCAAGCAATAGAGTACCATCACTACGTCAAGCTT
CAAAACAATGTAATGCAGGTGAAAAAGCATTTTCAATGGAACTCTTTTTCCAAAGATTTT
GATATTTTTCATATGGTTATGTATGAGTTGTGGATTCGACGAAGTCATTTGCGACACATC
TACTAA