Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008634
CDS Infomation

pacid=37472775 polypeptide=PGSC0003DMP400005994 locus=PGSC0003DMG400003345 ID=PGSC0003DMT400008634.v4.03 annot-version=v4.03
Sequence

ATGGATTTATTTTTGATTGCCGTTACAGTAACTTGCTCATTGCTTGTTTTCTTCTTTCTT
CGCAAACAATTTTTCACAGATAAATCAGAGCGTAGAATTAGAACAGTACCTGAAGCTGGC
GGAGCATGGCCTATTATCGGCCATCTCCACTTCCTCCGTGGATCGAAAACTGATCAATTG
CCTCACAGAACCTTAAGCCGCATGGCAGATAAGTACGGATCGATTTTCGGAATGAAGCTT
GGAGTTCATCAGGTTGTAGTTGTGAGCGATCCCAAATTAGCCAAAGAGTGCTTCACAACA
AACGATTTAGCCCTAGCCGGCCGGCCTAAATCAATGGGTTCAGAAATCATGGGCTACAAA
CACGCCATGTTTGGACTTTGTTCTTATGGTCCTTACTGGCGAGAAACAAGGAAGATTGCC
ACTGTTGAACTTCTCTCCAATCGGCGAATCGAGATGCTCAAACACATCAGAGAATTTGAG
GTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGCGGCGAAGAATAATTTAAATGGT
GTTGTGAAGATGGAGATGAAGGAATGGTTTGGGGATATAGTTATGAACACTATGGGGAAA
ATGTTATTCGGAAAAGGGCGAAGGAGTAATGAGGACGAAGGAATAAATAATGCTCACAAA
GCAATTCGAAGATTTTTCGAATTATTAGGAGCATTTGTTGTGGCTGATTTTTTACCTTAT
TTAAGATGGCTGGATATAGGAGGCCATGAGAAAGCAATGAAGAAGGTTTCTAGAGAAATG
GACTCTGTTGTTGAAGAATGGTTAGCAGAGCACAAAACGAAGAGAGAAATTATAAAATCT
GGTGAAGCAGAAGAAGATTTCATGGATGTCATGCTTTCCATTTGTGAAAACAGAGGTCTG
CCTGAATTTGATGCCGACACTGCTATCAAAGCCACATGCATGGGTGTACTAGCGGCAGGT
ACAGACACCACGATCGTAACTTCAACATGGACTTTATCTTTGCTCCTAAACAACTATGAA
TCACTAAAAAAGGCCCAAGATGAGCTAGATGCTCACGTTGGCAAGAATAGATGGGTCCAA
GAATCGGACATCAAGAACTTGGTTTATCTTCAAGCTATTGTCAAAGAAGCATTACGTTTA
TATCCGGCTGCACCGCTCGCAGTACCACACGAGTCGATGGAGGATTGTACCATCAGTGGC
TATGATATACCAAAAGGTACTCGCTTATTAGTGAACATATGGAAGATTCATCACGATCCT
AATATATGGCCAAATCCTCACGAGTTTAAACCAGAGAGGTTCTTGACGACCCATAAGGAT
GTGGATGTAAAGGGCAATCACTTTGAGTTGATACCATTTGGTAGTGGAAGAAGAATGTGC
CCTGGAATTTCTTTGACCCTTCAAGTGGTGCCCTTTGTAATAGCAGTGTTGCTGCAGGGG
TTTAACATCAAGAGACCTTCAGATGAACCAATTGATATGAGTGAGATCTTTGGATTGACA
GTGCTCAAAGCTTCTCCGCTTGAGGTTCTCCTTGCTCCTCGCTTGGCTCCCGTTCTTTAT
GAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400005994
PEP Infomation

pacid=37472775 transcript=PGSC0003DMT400008634 locus=PGSC0003DMG400003345 ID=PGSC0003DMT400008634.v4.03 annot-version=v4.03
Sequence

MDLFLIAVTVTCSLLVFFFLRKQFFTDKSERRIRTVPEAGGAWPIIGHLHFLRGSKTDQL
PHRTLSRMADKYGSIFGMKLGVHQVVVVSDPKLAKECFTTNDLALAGRPKSMGSEIMGYK
HAMFGLCSYGPYWRETRKIATVELLSNRRIEMLKHIREFEVKSGIKEIYNNWAAKNNLNG
VVKMEMKEWFGDIVMNTMGKMLFGKGRRSNEDEGINNAHKAIRRFFELLGAFVVADFLPY
LRWLDIGGHEKAMKKVSREMDSVVEEWLAEHKTKREIIKSGEAEEDFMDVMLSICENRGL
PEFDADTAIKATCMGVLAAGTDTTIVTSTWTLSLLLNNYESLKKAQDELDAHVGKNRWVQ
ESDIKNLVYLQAIVKEALRLYPAAPLAVPHESMEDCTISGYDIPKGTRLLVNIWKIHHDP
NIWPNPHEFKPERFLTTHKDVDVKGNHFELIPFGSGRRMCPGISLTLQVVPFVIAVLLQG
FNIKRPSDEPIDMSEIFGLTVLKASPLEVLLAPRLAPVLYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400008634
Transcript Infomation

pacid=37472775 locus=PGSC0003DMG400003345 ID=PGSC0003DMT400008634.v4.03 annot-version=v4.03
Sequence

ATGGATTTATTTTTGATTGCCGTTACAGTAACTTGCTCATTGCTTGTTTTCTTCTTTCTT
CGCAAACAATTTTTCACAGATAAATCAGAGCGTAGAATTAGAACAGTACCTGAAGCTGGC
GGAGCATGGCCTATTATCGGCCATCTCCACTTCCTCCGTGGATCGAAAACTGATCAATTG
CCTCACAGAACCTTAAGCCGCATGGCAGATAAGTACGGATCGATTTTCGGAATGAAGCTT
GGAGTTCATCAGGTTGTAGTTGTGAGCGATCCCAAATTAGCCAAAGAGTGCTTCACAACA
AACGATTTAGCCCTAGCCGGCCGGCCTAAATCAATGGGTTCAGAAATCATGGGCTACAAA
CACGCCATGTTTGGACTTTGTTCTTATGGTCCTTACTGGCGAGAAACAAGGAAGATTGCC
ACTGTTGAACTTCTCTCCAATCGGCGAATCGAGATGCTCAAACACATCAGAGAATTTGAG
GTAAAATCAGGTATTAAAGAGATTTATAATAATTGGGCGGCGAAGAATAATTTAAATGGT
GTTGTGAAGATGGAGATGAAGGAATGGTTTGGGGATATAGTTATGAACACTATGGGGAAA
ATGTTATTCGGAAAAGGGCGAAGGAGTAATGAGGACGAAGGAATAAATAATGCTCACAAA
GCAATTCGAAGATTTTTCGAATTATTAGGAGCATTTGTTGTGGCTGATTTTTTACCTTAT
TTAAGATGGCTGGATATAGGAGGCCATGAGAAAGCAATGAAGAAGGTTTCTAGAGAAATG
GACTCTGTTGTTGAAGAATGGTTAGCAGAGCACAAAACGAAGAGAGAAATTATAAAATCT
GGTGAAGCAGAAGAAGATTTCATGGATGTCATGCTTTCCATTTGTGAAAACAGAGGTCTG
CCTGAATTTGATGCCGACACTGCTATCAAAGCCACATGCATGGGTGTACTAGCGGCAGGT
ACAGACACCACGATCGTAACTTCAACATGGACTTTATCTTTGCTCCTAAACAACTATGAA
TCACTAAAAAAGGCCCAAGATGAGCTAGATGCTCACGTTGGCAAGAATAGATGGGTCCAA
GAATCGGACATCAAGAACTTGGTTTATCTTCAAGCTATTGTCAAAGAAGCATTACGTTTA
TATCCGGCTGCACCGCTCGCAGTACCACACGAGTCGATGGAGGATTGTACCATCAGTGGC
TATGATATACCAAAAGGTACTCGCTTATTAGTGAACATATGGAAGATTCATCACGATCCT
AATATATGGCCAAATCCTCACGAGTTTAAACCAGAGAGGTTCTTGACGACCCATAAGGAT
GTGGATGTAAAGGGCAATCACTTTGAGTTGATACCATTTGGTAGTGGAAGAAGAATGTGC
CCTGGAATTTCTTTGACCCTTCAAGTGGTGCCCTTTGTAATAGCAGTGTTGCTGCAGGGG
TTTAACATCAAGAGACCTTCAGATGAACCAATTGATATGAGTGAGATCTTTGGATTGACA
GTGCTCAAAGCTTCTCCGCTTGAGGTTCTCCTTGCTCCTCGCTTGGCTCCCGTTCTTTAT
GAATGA