Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008632
CDS Infomation

pacid=37471706 polypeptide=PGSC0003DMP400005992 locus=PGSC0003DMG400003344 ID=PGSC0003DMT400008632.v4.03 annot-version=v4.03
Sequence

ATGTTCCCGCCAAAACCTCAACGCCGGACTCAGTCGATGCCACGTGGCATTTCTCCTAAT
CTGGCCGACAAAGTGATCGTCGCCGTGAAGGCGGAGAAGGTGATCAATAAGACCGCACTA
GCTTGGGCTATAACTCACGTTGTTCGTCCTGGTGATTGCATTACGTTGCTAGCCGTGTTT
TCTGATGAGAAATCAGAGAGAAGAAAATTCTGGGGATTTCCGAGGATGAGAGGAGATTGC
CGGAGTAATGAACGGACGCATTCACATGATCGGATTGGACAAATCACGGAGTCTTGTTCT
CAGATGGTTCTTCAATTTCACGATCGCATAGATGTTAGGGTGCGAATTAAGGTCGTCTCA
GCTTTGTGTATTGGTGTGGTGGCAGCTGAAGCAAAAAGCAATGCAGTCAGCTGGGTCATT
TTGGACAAAAAATTAAAGTTAGAGCTTAAGCATTGCATGGAAGAACTTCGTTGCAACATT
GTAGTGATGAAGGGTTCCAAACCGAAAGTTCTCAGGTTAAATCTAGGATCTTCAGAGGAA
CTACAAACTCCTTTCTTTTCTGCCAATTCCTCTCCTGTTTTGGATAGTAGAGACTTACAG
GATGAAAGAATGAAGCATTCTACTCCGGTGAGCAGTCCCGAGGATCAAAGAACATCCTAT
ATCAGAACTTCGTTGCTGAATTCATTGACGGATCCAGACACATTCCTTCTATATGAACGG
AATCCCCTGTATGAAGGGCTCGATAAAGAAACATTTTCACCGGTCCACAAGCAAAGTGGG
CGTGATCATCCAGTAAATGACCTGCCCTCGTTTGGGGAAAGGATAATAACTCTTTCAACT
GTTCCTAAATCTCAAACTCATAATCATAAAACAATCCTTTGGATTCCGCAGAACGATATC
ATTGCTGACAACTATTCAGCTGTAGAAAACTGCAAAAGTACCTCACATTCAGTCACTTCT
AGAAATGAAAATCAGAATTTTATCGGGTACAACAAAAACCTGAGTACCCAAAGAAGCAAG
TTAAATCAAGACACTGACATGGACTATCTTAACTCCAGCATCAGAGAAGCAGTCTCTTTA
GGTCGAACTTCCTCGATACCTCCTCCTCTATGTTCATTCTGTCAATGTAAAGCACCATCT
TTTGGAAAGCCTCCGAAACTATTTCACTATGAAGAGCTACAAGAAGCAACAAACGGATTC
TCAGACAGAAATTTTCTAGCAGAAGGTGGGTTCGGTCTGGTTCATAAAGGGGTTTTAAGG
GATGGATTGGTCGTTGCAGTAAAGCAGCTGAAGTTTATTGGTTCTCAAGCAGACGCTGAT
TTTCGTAGGGAAGTTCGAGTTTTGAGCTGTGCCCAGCATAGGAATGTTGTACTGCTGGTT
GGTTACTGCATTCAGGGAAATAGGAGACTATTTGTATATGAGTTTATATGCAACAAGTCC
TTGGACTTCCATTTGCATGGAACAAAAGAAACAGCTCTAGATTGGAGCTCACGTCTTAAG
ATAGCTATCGGGACAGCAAGAGGCTTACGTTACCTTCATGAAGATTGCAGAGTGGGATGC
ATAGTTCACCGGGATCTCAGACCAAAAAACATCCTCTTAACTCACGATTTTGAACCTTTG
GTTGCTGATTTTGGGCTTTCACAAATGTACAATGAATGGGAAGTTTCTGAAGATGATGAA
CATCTAATTAGAACTTCAAGGTATCTTGCCCCAGAATACTCCAATGATGGGAAGGTCACG
GAAAAGGTTGACGTATATGCTTTTGGCTTGGTGGTATTGGAGTTGATAACTGGTAGAAAA
ACCACTGACTTGCAATGCTACAGCGGTCAGCACCTACTTCCAGGAAGCCTTTCCCCTATA
TCTGGAAAGGGGCAATATCTTTCAGCTTTTAAAAATCAGCTGCTCGACTCCAACTTGATG
TCATCTCAGCTTGAAAACTTCCCTTATGAACTACAGGCAATGAGTCATGCTGCTTATATG
TGTCTACAGGAAGATCCTCATCTGCGACCTCCCATTTCAAAGGTACTTAAAATACTAGAA
GGAGGCAGTGCCATTCTTGACTCAAATTCATTTGGCAGTAGAAGTGGTTATATGCAGGGA
CCTAAAAACCATCCTGTATCAAAGAGACATTCTCGCAGGCTCTCTTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005992
PEP Infomation

pacid=37471706 transcript=PGSC0003DMT400008632 locus=PGSC0003DMG400003344 ID=PGSC0003DMT400008632.v4.03 annot-version=v4.03
Sequence

MFPPKPQRRTQSMPRGISPNLADKVIVAVKAEKVINKTALAWAITHVVRPGDCITLLAVF
SDEKSERRKFWGFPRMRGDCRSNERTHSHDRIGQITESCSQMVLQFHDRIDVRVRIKVVS
ALCIGVVAAEAKSNAVSWVILDKKLKLELKHCMEELRCNIVVMKGSKPKVLRLNLGSSEE
LQTPFFSANSSPVLDSRDLQDERMKHSTPVSSPEDQRTSYIRTSLLNSLTDPDTFLLYER
NPLYEGLDKETFSPVHKQSGRDHPVNDLPSFGERIITLSTVPKSQTHNHKTILWIPQNDI
IADNYSAVENCKSTSHSVTSRNENQNFIGYNKNLSTQRSKLNQDTDMDYLNSSIREAVSL
GRTSSIPPPLCSFCQCKAPSFGKPPKLFHYEELQEATNGFSDRNFLAEGGFGLVHKGVLR
DGLVVAVKQLKFIGSQADADFRREVRVLSCAQHRNVVLLVGYCIQGNRRLFVYEFICNKS
LDFHLHGTKETALDWSSRLKIAIGTARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPL
VADFGLSQMYNEWEVSEDDEHLIRTSRYLAPEYSNDGKVTEKVDVYAFGLVVLELITGRK
TTDLQCYSGQHLLPGSLSPISGKGQYLSAFKNQLLDSNLMSSQLENFPYELQAMSHAAYM
CLQEDPHLRPPISKVLKILEGGSAILDSNSFGSRSGYMQGPKNHPVSKRHSRRLSY*

Transcript Sequence

Transcript ID

PGSC0003DMT400008632
Transcript Infomation

pacid=37471706 locus=PGSC0003DMG400003344 ID=PGSC0003DMT400008632.v4.03 annot-version=v4.03
Sequence

ATGTTCCCGCCAAAACCTCAACGCCGGACTCAGTCGATGCCACGTGGCATTTCTCCTAAT
CTGGCCGACAAAGTGATCGTCGCCGTGAAGGCGGAGAAGGTGATCAATAAGACCGCACTA
GCTTGGGCTATAACTCACGTTGTTCGTCCTGGTGATTGCATTACGTTGCTAGCCGTGTTT
TCTGATGAGAAATCAGAGAGAAGAAAATTCTGGGGATTTCCGAGGATGAGAGGAGATTGC
CGGAGTAATGAACGGACGCATTCACATGATCGGATTGGACAAATCACGGAGTCTTGTTCT
CAGATGGTTCTTCAATTTCACGATCGCATAGATGTTAGGGTGCGAATTAAGGTCGTCTCA
GCTTTGTGTATTGGTGTGGTGGCAGCTGAAGCAAAAAGCAATGCAGTCAGCTGGGTCATT
TTGGACAAAAAATTAAAGTTAGAGCTTAAGCATTGCATGGAAGAACTTCGTTGCAACATT
GTAGTGATGAAGGGTTCCAAACCGAAAGTTCTCAGGTTAAATCTAGGATCTTCAGAGGAA
CTACAAACTCCTTTCTTTTCTGCCAATTCCTCTCCTGTTTTGGATAGTAGAGACTTACAG
GATGAAAGAATGAAGCATTCTACTCCGGTGAGCAGTCCCGAGGATCAAAGAACATCCTAT
ATCAGAACTTCGTTGCTGAATTCATTGACGGATCCAGACACATTCCTTCTATATGAACGG
AATCCCCTGTATGAAGGGCTCGATAAAGAAACATTTTCACCGGTCCACAAGCAAAGTGGG
CGTGATCATCCAGTAAATGACCTGCCCTCGTTTGGGGAAAGGATAATAACTCTTTCAACT
GTTCCTAAATCTCAAACTCATAATCATAAAACAATCCTTTGGATTCCGCAGAACGATATC
ATTGCTGACAACTATTCAGCTGTAGAAAACTGCAAAAGTACCTCACATTCAGTCACTTCT
AGAAATGAAAATCAGAATTTTATCGGGTACAACAAAAACCTGAGTACCCAAAGAAGCAAG
TTAAATCAAGACACTGACATGGACTATCTTAACTCCAGCATCAGAGAAGCAGTCTCTTTA
GGTCGAACTTCCTCGATACCTCCTCCTCTATGTTCATTCTGTCAATGTAAAGCACCATCT
TTTGGAAAGCCTCCGAAACTATTTCACTATGAAGAGCTACAAGAAGCAACAAACGGATTC
TCAGACAGAAATTTTCTAGCAGAAGGTGGGTTCGGTCTGGTTCATAAAGGGGTTTTAAGG
GATGGATTGGTCGTTGCAGTAAAGCAGCTGAAGTTTATTGGTTCTCAAGCAGACGCTGAT
TTTCGTAGGGAAGTTCGAGTTTTGAGCTGTGCCCAGCATAGGAATGTTGTACTGCTGGTT
GGTTACTGCATTCAGGGAAATAGGAGACTATTTGTATATGAGTTTATATGCAACAAGTCC
TTGGACTTCCATTTGCATGGAACAAAAGAAACAGCTCTAGATTGGAGCTCACGTCTTAAG
ATAGCTATCGGGACAGCAAGAGGCTTACGTTACCTTCATGAAGATTGCAGAGTGGGATGC
ATAGTTCACCGGGATCTCAGACCAAAAAACATCCTCTTAACTCACGATTTTGAACCTTTG
GTTGCTGATTTTGGGCTTTCACAAATGTACAATGAATGGGAAGTTTCTGAAGATGATGAA
CATCTAATTAGAACTTCAAGGTATCTTGCCCCAGAATACTCCAATGATGGGAAGGTCACG
GAAAAGGTTGACGTATATGCTTTTGGCTTGGTGGTATTGGAGTTGATAACTGGTAGAAAA
ACCACTGACTTGCAATGCTACAGCGGTCAGCACCTACTTCCAGGAAGCCTTTCCCCTATA
TCTGGAAAGGGGCAATATCTTTCAGCTTTTAAAAATCAGCTGCTCGACTCCAACTTGATG
TCATCTCAGCTTGAAAACTTCCCTTATGAACTACAGGCAATGAGTCATGCTGCTTATATG
TGTCTACAGGAAGATCCTCATCTGCGACCTCCCATTTCAAAGGTACTTAAAATACTAGAA
GGAGGCAGTGCCATTCTTGACTCAAATTCATTTGGCAGTAGAAGTGGTTATATGCAGGGA
CCTAAAAACCATCCTGTATCAAAGAGACATTCTCGCAGGCTCTCTTACTAA