Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008583
CDS Infomation

pacid=37427451 polypeptide=PGSC0003DMP400005957 locus=PGSC0003DMG400003323 ID=PGSC0003DMT400008583.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTAATTGTGTGCAAGGGAAAATATTTGTTGGGGGAATATCGGCGGAGACAAGT
GAAGAAATACTTACGCAACACTTTAGTCGTTATGGAGAAGTGGTGAAGTCACAGGTAATC
AAATTTAGGGAGACTAATTGTGGAAAAGGTTTTGGTTTTGTTACGTTTGCCGATTCTTCT
GTTATCAATCAACTTCTTCATCAGCAGCACATAATCCTTGGAAGAACGGTTGATGTTAAA
TTGGCAATACCTAAAGGTGCAAGTCCTTGTTCAGAATGCCAACAATCTCAAAGACAAAAT
AGTGAAACTAGCAATAGCAACAGAAGAAAGATTTTTGTTGGTGGATTGCCTCTTAGTTTA
TCGGAAGAAGAATTTAAAACGTATTTTGAAAAATTTGGAACAATTTCACAAGTAAACCTT
ATCTCCGATAAAGAAACCAAAACGCCTCGAGGATTTGGGTTTGTCACTTATGATTCAGAA
GAATCTGTAACACATGTATTGCAAGAGAAACTTCACTGGTTGAAAAATAAATATGTTGAG
GTCAAAAAAGCAGAGCCAAGGGAACGGAGAGTTATGAATAGTTATTATCATAATTTTTAC
CCTACAAATTCTGGCAATGGAATGTGGCAAATTTATGATTGTAATAATGGGATTTTTGCC
CCTCATTATTGCCACAATCATACTATGGTACCCACTAATTGGACTAGTTCGTTTAATCAT
TTGGGTACAAATTTATTTGTTCCCCCACAGCCTGTGGTACCATATTTTACCCCTACATAT
CCAGTCAACTGCTACGGTTCAACGCATAGATATCCAATCAACTGCTACGGTTCAACGCAT
AGATATCCAGTCAACTGCTACGGTTCAACACATAATCAAGTGGATGATAATAGGGGCTCT
TACTCAACTTTTGCTCAGAATAATGTGATAAATGAAGGGAATGACCAAGAATGCAATAAT
ACTGAGGTTCAACTTGTTAGAAATGGTTCACTTCCAGTTAATGAGAGTGCAAAGCCACTA
GAGAAAGAAACAGGCAATGGTGAAAAAGATGACTTGGAGAAAATTCCCCAGGACAATACA
AAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAA
AACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAAT
GGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAA
AAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGAT
GACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTG
GTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAA
ATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCC
CAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGAC
AATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACA
AAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAA
AACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAAT
GGTGGAAAAGATCACTTTGTGAAAATTCTCCAGGTCAATACTGAAGATGACACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005957
PEP Infomation

pacid=37427451 transcript=PGSC0003DMT400008583 locus=PGSC0003DMG400003323 ID=PGSC0003DMT400008583.v4.03 annot-version=v4.03
Sequence

MESNCVQGKIFVGGISAETSEEILTQHFSRYGEVVKSQVIKFRETNCGKGFGFVTFADSS
VINQLLHQQHIILGRTVDVKLAIPKGASPCSECQQSQRQNSETSNSNRRKIFVGGLPLSL
SEEEFKTYFEKFGTISQVNLISDKETKTPRGFGFVTYDSEESVTHVLQEKLHWLKNKYVE
VKKAEPRERRVMNSYYHNFYPTNSGNGMWQIYDCNNGIFAPHYCHNHTMVPTNWTSSFNH
LGTNLFVPPQPVVPYFTPTYPVNCYGSTHRYPINCYGSTHRYPVNCYGSTHNQVDDNRGS
YSTFAQNNVINEGNDQECNNTEVQLVRNGSLPVNESAKPLEKETGNGEKDDLEKIPQDNT
KENNGEKDDLVKIPQDNTKENNGEKDDLVKIPQDNTKENNGEKDDLVKIPQDNTKENNGE
KDDLVKIPQDNTKENNGEKDDLVKIPQDNTKENNGEKDDLVKIPQDNTKENNGEKDDLVK
IPQDNTKENNGEKDDLVKIPQDNTKENNGEKDDLVKIPQDNTKENNGEKDDLVKIPQDNT
KENNGEKDDLVKIPQDNTKENNGEKDDLVKIPQDNTKENNGGKDHFVKILQVNTEDDT*

Transcript Sequence

Transcript ID

PGSC0003DMT400008583
Transcript Infomation

pacid=37427451 locus=PGSC0003DMG400003323 ID=PGSC0003DMT400008583.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTAATTGTGTGCAAGGGAAAATATTTGTTGGGGGAATATCGGCGGAGACAAGT
GAAGAAATACTTACGCAACACTTTAGTCGTTATGGAGAAGTGGTGAAGTCACAGGTAATC
AAATTTAGGGAGACTAATTGTGGAAAAGGTTTTGGTTTTGTTACGTTTGCCGATTCTTCT
GTTATCAATCAACTTCTTCATCAGCAGCACATAATCCTTGGAAGAACGGTTGATGTTAAA
TTGGCAATACCTAAAGGTGCAAGTCCTTGTTCAGAATGCCAACAATCTCAAAGACAAAAT
AGTGAAACTAGCAATAGCAACAGAAGAAAGATTTTTGTTGGTGGATTGCCTCTTAGTTTA
TCGGAAGAAGAATTTAAAACGTATTTTGAAAAATTTGGAACAATTTCACAAGTAAACCTT
ATCTCCGATAAAGAAACCAAAACGCCTCGAGGATTTGGGTTTGTCACTTATGATTCAGAA
GAATCTGTAACACATGTATTGCAAGAGAAACTTCACTGGTTGAAAAATAAATATGTTGAG
GTCAAAAAAGCAGAGCCAAGGGAACGGAGAGTTATGAATAGTTATTATCATAATTTTTAC
CCTACAAATTCTGGCAATGGAATGTGGCAAATTTATGATTGTAATAATGGGATTTTTGCC
CCTCATTATTGCCACAATCATACTATGGTACCCACTAATTGGACTAGTTCGTTTAATCAT
TTGGGTACAAATTTATTTGTTCCCCCACAGCCTGTGGTACCATATTTTACCCCTACATAT
CCAGTCAACTGCTACGGTTCAACGCATAGATATCCAATCAACTGCTACGGTTCAACGCAT
AGATATCCAGTCAACTGCTACGGTTCAACACATAATCAAGTGGATGATAATAGGGGCTCT
TACTCAACTTTTGCTCAGAATAATGTGATAAATGAAGGGAATGACCAAGAATGCAATAAT
ACTGAGGTTCAACTTGTTAGAAATGGTTCACTTCCAGTTAATGAGAGTGCAAAGCCACTA
GAGAAAGAAACAGGCAATGGTGAAAAAGATGACTTGGAGAAAATTCCCCAGGACAATACA
AAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAA
AACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAAT
GGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAA
AAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGAT
GACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTG
GTGAAAATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAA
ATTCCCCAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCC
CAGGACAATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGAC
AATACAAAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACA
AAAGAAAACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAA
AACAATGGTGAAAAAGATGACTTGGTGAAAATTCCCCAGGACAATACAAAAGAAAACAAT
GGTGGAAAAGATCACTTTGTGAAAATTCTCCAGGTCAATACTGAAGATGACACCTAA