Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008572
CDS Infomation

pacid=37425341 polypeptide=PGSC0003DMP400005951 locus=PGSC0003DMG400003318 ID=PGSC0003DMT400008572.v4.03 annot-version=v4.03
Sequence

ATGGTTGCAATTGGAAAATGTTCGTCGATTTATCGGACTTCGCCGGAATTTGATTTTCCG
GAGACATCGTCGAGAAAGTTAGGGTTATCAAAGCTACCAGGTAAATCGTTTGGCTTCAGT
GTTTCTAGTAGCGAGGTCAAAACGAGCTTTATAGGGCCTTTAAGAGCAATTGAGGCTTCT
AGGATGTCTCATGTCAACGGAAAAGCTGAAAAATTTCAGCGGGTAGGGTGTGATTCCAAC
GAAGACTTGCCTACAAATGATTGCAATGGCTTTGCTGGTAAAGGTATACCTCAGATGTCT
ACAATAGGGAATTCAACAAACATTGTCTGGCACAAGTGCTCTGTAGAGAAATGTGACAGA
GACGAGTTGCTTCAACAACGGGGTTGTGTTATATGGGTAACGGGTCTCAGTGGTTCAGGG
AAGAGCACTCTCGCATGTGCTCTAGGTCGTGGCTTACACGCTAGAGGAAAACTCACCTAT
ATCCTTGATGGTGATAATGTTCGCCATGGTCTGAATCGTGATCTTAGTTTCAGAGCAGAA
GACCGAGCAGAAAATATAAGACGGACTGGGGAGGTGGCAAAGCTTTTCGCGGATGCTGGA
GTTATTTGCATTGCCAGTTTGATATCTCCCTATAGAAAGGAACGAGATGCTTGTCGTGCT
TTACTGGCAGAAGGGGATTTCATTGAGGTGTTCATGGATATTCCTCTGCATGTATGTGAG
GCAAGGGATCCTAAGGGGTTGTACAAACTTGCTCGAGCTGGGAAAATAAAAGGTTTTACC
GGTGTTGATGATCCATACGAGCCACCCCTAACGTCTGAGATAGTTTTACGTCAGAACCAA
GGGATATGCGATTCTCCTAATGATTTGGCCGATATAGTTATTTCATACTTGGACAAAAAA
GGGTACCTGAAAGCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005951
PEP Infomation

pacid=37425341 transcript=PGSC0003DMT400008572 locus=PGSC0003DMG400003318 ID=PGSC0003DMT400008572.v4.03 annot-version=v4.03
Sequence

MVAIGKCSSIYRTSPEFDFPETSSRKLGLSKLPGKSFGFSVSSSEVKTSFIGPLRAIEAS
RMSHVNGKAEKFQRVGCDSNEDLPTNDCNGFAGKGIPQMSTIGNSTNIVWHKCSVEKCDR
DELLQQRGCVIWVTGLSGSGKSTLACALGRGLHARGKLTYILDGDNVRHGLNRDLSFRAE
DRAENIRRTGEVAKLFADAGVICIASLISPYRKERDACRALLAEGDFIEVFMDIPLHVCE
ARDPKGLYKLARAGKIKGFTGVDDPYEPPLTSEIVLRQNQGICDSPNDLADIVISYLDKK
GYLKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400008572
Transcript Infomation

pacid=37425341 locus=PGSC0003DMG400003318 ID=PGSC0003DMT400008572.v4.03 annot-version=v4.03
Sequence

ATGGTTGCAATTGGAAAATGTTCGTCGATTTATCGGACTTCGCCGGAATTTGATTTTCCG
GAGACATCGTCGAGAAAGTTAGGGTTATCAAAGCTACCAGGTAAATCGTTTGGCTTCAGT
GTTTCTAGTAGCGAGGTCAAAACGAGCTTTATAGGGCCTTTAAGAGCAATTGAGGCTTCT
AGGATGTCTCATGTCAACGGAAAAGCTGAAAAATTTCAGCGGGTAGGGTGTGATTCCAAC
GAAGACTTGCCTACAAATGATTGCAATGGCTTTGCTGGTAAAGGTATACCTCAGATGTCT
ACAATAGGGAATTCAACAAACATTGTCTGGCACAAGTGCTCTGTAGAGAAATGTGACAGA
GACGAGTTGCTTCAACAACGGGGTTGTGTTATATGGGTAACGGGTCTCAGTGGTTCAGGG
AAGAGCACTCTCGCATGTGCTCTAGGTCGTGGCTTACACGCTAGAGGAAAACTCACCTAT
ATCCTTGATGGTGATAATGTTCGCCATGGTCTGAATCGTGATCTTAGTTTCAGAGCAGAA
GACCGAGCAGAAAATATAAGACGGACTGGGGAGGTGGCAAAGCTTTTCGCGGATGCTGGA
GTTATTTGCATTGCCAGTTTGATATCTCCCTATAGAAAGGAACGAGATGCTTGTCGTGCT
TTACTGGCAGAAGGGGATTTCATTGAGGTGTTCATGGATATTCCTCTGCATGTATGTGAG
GCAAGGGATCCTAAGGGGTTGTACAAACTTGCTCGAGCTGGGAAAATAAAAGGTTTTACC
GGTGTTGATGATCCATACGAGCCACCCCTAACGTCTGAGATAGTTTTACGTCAGAACCAA
GGGATATGCGATTCTCCTAATGATTTGGCCGATATAGTTATTTCATACTTGGACAAAAAA
GGGTACCTGAAAGCGTAA