Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008555
CDS Infomation

pacid=37472565 polypeptide=PGSC0003DMP400005939 locus=PGSC0003DMG400003308 ID=PGSC0003DMT400008555.v4.03 annot-version=v4.03
Sequence

ATGGAGAACCAATATAACTACTATCTTACAATCTTTCTTGTTCTAATTTTTCCATTTTTT
TACAAATATTTCTTCAATTCTAGAAGAAATAATCTACCACCTAGTCCACTTGCATTTCCA
ATTATAGGCCATCTTTACCTTTTGAAAAACAAACCATTGTCGACACTAACCTCATTATCA
GCAAAATATGGTCCTGTTTTGTATCTTAGGTATGGCTCTATACCTGTACTTATTGTCTCG
TCGCCATCTGCAGTCGAAGAATGCTTCACCAAAAATGATATCATTTTTGCAAATCGACCA
CGTACCATGGCAGGAGACTGGTTGACATTCAACTATACGGCCTATATTTGGGCGCCTTAT
GGACAATTATGGAAAATTCTTCGAAGGTTGACAGTTATGGAGCTTTTATCATCAAACAGC
CTACAAAAAACGTCCAATGTCCGGGATCAAGAAGTCGTTAACTTTACGCGTTCATTATTC
AAATTTTGTAATGGTAGAAGCAGAAATGTGGATTTGACAAACTGGATTTGTACTTTTAGT
TTCAACCTTATGAACAAAATTGTCGCGGGGAGACATTTAGTGAGTGAGGAAGACGCTGGT
ATGGGAAAGGGGATAGCGATGATCGAAAGACTAAAGGGGATTTTCATTGTAGATTTACCA
GTGTTGAATATGTGTGACTTCTTGCCACTTTTGAGGTGGATTGGTTATAAGGGGTTGGAA
AAGAAAATGAGATTAGTGCATAATCAGAGAAATGAATTCTTGAACAATTTGCTAGAGGAA
TTTAGACTGGAGAAAGTTAGTGTTGTAAACAGGGAGAAACAGAACACATTGATTGGAACT
CTGTTGTCTCTTCAAGAATCTGAGCCTGAATTCTACACAGAAGATGTAATCAAAAGTATT
ATGCTGGTCATATTTATTGCTGGAACAGATACCTCGTCAACATCCCTCCAATGGGCGATG
CGTCTTCTTTTAGCTCATCCTGAGGCATTGCATAAGCTGAGGGCTGAGATTGATAGCCAA
GTAGGGAACGAGCATTTGCTAAACGAATCTGATCTCACTAAACTTCCTTATTTGCATAGT
GTTATCAATGAGACGCTAAGATTATACCCTCCAGTACCACTTCTATTGCCTCACTACTCA
TCAGAGGATTGTACTGTTGGTGGCTACAATGTACCAAAACATACGATCCTACTGGTTAAC
ATTTGGGCCATTCAAAGGGATCCCCAAGTATGGAAGGAGCCTAACGAGTTCAAACCAGAG
AGGTTTGAGGCAATGGAAGGGGAAAAAGAAGGATTCAACTATAAACTTATACCATTTGGA
ATGGGGAGAAGATCATGTCCTGGAGCTACTATGGGCACGCGTGCTATTTCATTGGCGCTT
GGTGCACTTATTCAATGCTTTGATTGGCAAAGTGCGGGAGAGGAAAATTTGGAGTTAAGC
TACAATTCAAGAATCAACATTCAGAAAATTAAGTCCTTGGAGGCTATTTGCACTCCGCGT
TCCAACTTTGTGCAGCTTCTCTCCCAGCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005939
PEP Infomation

pacid=37472565 transcript=PGSC0003DMT400008555 locus=PGSC0003DMG400003308 ID=PGSC0003DMT400008555.v4.03 annot-version=v4.03
Sequence

MENQYNYYLTIFLVLIFPFFYKYFFNSRRNNLPPSPLAFPIIGHLYLLKNKPLSTLTSLS
AKYGPVLYLRYGSIPVLIVSSPSAVEECFTKNDIIFANRPRTMAGDWLTFNYTAYIWAPY
GQLWKILRRLTVMELLSSNSLQKTSNVRDQEVVNFTRSLFKFCNGRSRNVDLTNWICTFS
FNLMNKIVAGRHLVSEEDAGMGKGIAMIERLKGIFIVDLPVLNMCDFLPLLRWIGYKGLE
KKMRLVHNQRNEFLNNLLEEFRLEKVSVVNREKQNTLIGTLLSLQESEPEFYTEDVIKSI
MLVIFIAGTDTSSTSLQWAMRLLLAHPEALHKLRAEIDSQVGNEHLLNESDLTKLPYLHS
VINETLRLYPPVPLLLPHYSSEDCTVGGYNVPKHTILLVNIWAIQRDPQVWKEPNEFKPE
RFEAMEGEKEGFNYKLIPFGMGRRSCPGATMGTRAISLALGALIQCFDWQSAGEENLELS
YNSRINIQKIKSLEAICTPRSNFVQLLSQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400008555
Transcript Infomation

pacid=37472565 locus=PGSC0003DMG400003308 ID=PGSC0003DMT400008555.v4.03 annot-version=v4.03
Sequence

ATGGAGAACCAATATAACTACTATCTTACAATCTTTCTTGTTCTAATTTTTCCATTTTTT
TACAAATATTTCTTCAATTCTAGAAGAAATAATCTACCACCTAGTCCACTTGCATTTCCA
ATTATAGGCCATCTTTACCTTTTGAAAAACAAACCATTGTCGACACTAACCTCATTATCA
GCAAAATATGGTCCTGTTTTGTATCTTAGGTATGGCTCTATACCTGTACTTATTGTCTCG
TCGCCATCTGCAGTCGAAGAATGCTTCACCAAAAATGATATCATTTTTGCAAATCGACCA
CGTACCATGGCAGGAGACTGGTTGACATTCAACTATACGGCCTATATTTGGGCGCCTTAT
GGACAATTATGGAAAATTCTTCGAAGGTTGACAGTTATGGAGCTTTTATCATCAAACAGC
CTACAAAAAACGTCCAATGTCCGGGATCAAGAAGTCGTTAACTTTACGCGTTCATTATTC
AAATTTTGTAATGGTAGAAGCAGAAATGTGGATTTGACAAACTGGATTTGTACTTTTAGT
TTCAACCTTATGAACAAAATTGTCGCGGGGAGACATTTAGTGAGTGAGGAAGACGCTGGT
ATGGGAAAGGGGATAGCGATGATCGAAAGACTAAAGGGGATTTTCATTGTAGATTTACCA
GTGTTGAATATGTGTGACTTCTTGCCACTTTTGAGGTGGATTGGTTATAAGGGGTTGGAA
AAGAAAATGAGATTAGTGCATAATCAGAGAAATGAATTCTTGAACAATTTGCTAGAGGAA
TTTAGACTGGAGAAAGTTAGTGTTGTAAACAGGGAGAAACAGAACACATTGATTGGAACT
CTGTTGTCTCTTCAAGAATCTGAGCCTGAATTCTACACAGAAGATGTAATCAAAAGTATT
ATGCTGGTCATATTTATTGCTGGAACAGATACCTCGTCAACATCCCTCCAATGGGCGATG
CGTCTTCTTTTAGCTCATCCTGAGGCATTGCATAAGCTGAGGGCTGAGATTGATAGCCAA
GTAGGGAACGAGCATTTGCTAAACGAATCTGATCTCACTAAACTTCCTTATTTGCATAGT
GTTATCAATGAGACGCTAAGATTATACCCTCCAGTACCACTTCTATTGCCTCACTACTCA
TCAGAGGATTGTACTGTTGGTGGCTACAATGTACCAAAACATACGATCCTACTGGTTAAC
ATTTGGGCCATTCAAAGGGATCCCCAAGTATGGAAGGAGCCTAACGAGTTCAAACCAGAG
AGGTTTGAGGCAATGGAAGGGGAAAAAGAAGGATTCAACTATAAACTTATACCATTTGGA
ATGGGGAGAAGATCATGTCCTGGAGCTACTATGGGCACGCGTGCTATTTCATTGGCGCTT
GGTGCACTTATTCAATGCTTTGATTGGCAAAGTGCGGGAGAGGAAAATTTGGAGTTAAGC
TACAATTCAAGAATCAACATTCAGAAAATTAAGTCCTTGGAGGCTATTTGCACTCCGCGT
TCCAACTTTGTGCAGCTTCTCTCCCAGCTTTGA