Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008521
CDS Infomation

pacid=37439404 polypeptide=PGSC0003DMP400005916 locus=PGSC0003DMG402003297 ID=PGSC0003DMT400008521.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAATTAGAAACTCCGCTGATAAATAAAAAAGATTACTACGAGAATTGTCCG
GGTTGTAAAGTAGATCTACACAAAGCGGGTCAAACGGGTTTACCCATTAAGGAGCTCTTC
ACTGTATGGGTTGTCATCCTTAGCGCAGCACTGCCAATATCATCTCTCTTTCCATTTGTT
TATTTCATGATAAAGGACTTTCACATTGCAAAGAGAGAGGAAGATATTAGTACATATGCA
GGTTATGTAGGTTCTGCATTTATGCTTGGAAGAGCTTTGACATCTGTCTTTTGGGGAACA
GTGGCTGATCGATATGGACGAAAACCAGTTATAGTTTTCGGCACTTTTGTAGTGGTTATT
TTCAATACTCTCTTTGGTCTTAGTGTCAACTTTTGGATGGCAGTCATTACACGGTTTCTT
CTCGGTTTCTTAAATGGTTTGATGGGACCAATAAGGGCATATGCTGCGGAAATTTTTCGT
GAAGAATATCAAGCAATGGGAATGTCAACGATTAGTAGTGCATGGGGTATTGGATTGATT
ATTGGCCCAGCTATAGGAGGCTTCTTTGCTCAGCCTGCAGAGAAATATCCGGCTGTATTC
TCAAAGGATTCTATATTTGGGAGATTTCCCTACTTCTTGCCTTGCTTATGCATATCACTG
TTTTCCTTGGTCGTGGGTATTGCTTCATTTTGGCTGCCGGAAACATTACACAATCATGAT
TCAAGAATGCCGCCTCAAAGTTCATACAAGGCTCTGGAGGCTGCATCTGATACGAAAGAA
GGAAACAAATCAACCCCGGCAAAAAGCCTTTTCAAGAACTGGCCATTGATTTCGGCTATC
ATCTTATACTGTGTCTTCGCTCTTCATGATATGGCTTACTCAGAGATATTCTCATTATGG
GCTGTGACCCCCAGAAAGTTTGGAGGCTTAAATTATTCAACTGTTGATGTTGGTGAAGTA
CTATCAATCTCGGGATGCGGCCTACTAGTCTTTCAACTAACTCTGTATCCATTGGTTGAG
AGGTATTTTGGTCCTATTGTCATTGCTCGAATTGCAGGAGTTTTGTCAATTCCCTTGTTG
GCGTGTTACCCTTATATTGCTATGCTCTCTGGGACTGCTCTCTCTGTGGCGATAAATGTT
GCATCCTTGTTGAAGAATGCTTTATCTATCTGTATCATAACAGGGTTGTTCATATTGCAA
AACAAATCAGTGGACCAGCGACAACGTGGAGCTGCTAATGGACTAGCCATGACATCTCAG
TCATTTTTCAAAGCTATCGGTCCAGCAGGGGCAGGAGTACTCTTTTCTTGGGCACAAAAA
AGGCTTGACGCTCCCATTCTTCCAGGTGCTCAAGTAGTATTCTTTGTGCTGAATGTGATT
GAAGCAATTGGTGTGTTGCTGACATTCAAACCATTCCTTGTTGAAACACAAAATACTAAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400005916
PEP Infomation

pacid=37439404 transcript=PGSC0003DMT400008521 locus=PGSC0003DMG402003297 ID=PGSC0003DMT400008521.v4.03 annot-version=v4.03
Sequence

MAEELETPLINKKDYYENCPGCKVDLHKAGQTGLPIKELFTVWVVILSAALPISSLFPFV
YFMIKDFHIAKREEDISTYAGYVGSAFMLGRALTSVFWGTVADRYGRKPVIVFGTFVVVI
FNTLFGLSVNFWMAVITRFLLGFLNGLMGPIRAYAAEIFREEYQAMGMSTISSAWGIGLI
IGPAIGGFFAQPAEKYPAVFSKDSIFGRFPYFLPCLCISLFSLVVGIASFWLPETLHNHD
SRMPPQSSYKALEAASDTKEGNKSTPAKSLFKNWPLISAIILYCVFALHDMAYSEIFSLW
AVTPRKFGGLNYSTVDVGEVLSISGCGLLVFQLTLYPLVERYFGPIVIARIAGVLSIPLL
ACYPYIAMLSGTALSVAINVASLLKNALSICIITGLFILQNKSVDQRQRGAANGLAMTSQ
SFFKAIGPAGAGVLFSWAQKRLDAPILPGAQVVFFVLNVIEAIGVLLTFKPFLVETQNTN
*

Transcript Sequence

Transcript ID

PGSC0003DMT400008521
Transcript Infomation

pacid=37439404 locus=PGSC0003DMG402003297 ID=PGSC0003DMT400008521.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAATTAGAAACTCCGCTGATAAATAAAAAAGATTACTACGAGAATTGTCCG
GGTTGTAAAGTAGATCTACACAAAGCGGGTCAAACGGGTTTACCCATTAAGGAGCTCTTC
ACTGTATGGGTTGTCATCCTTAGCGCAGCACTGCCAATATCATCTCTCTTTCCATTTGTT
TATTTCATGATAAAGGACTTTCACATTGCAAAGAGAGAGGAAGATATTAGTACATATGCA
GGTTATGTAGGTTCTGCATTTATGCTTGGAAGAGCTTTGACATCTGTCTTTTGGGGAACA
GTGGCTGATCGATATGGACGAAAACCAGTTATAGTTTTCGGCACTTTTGTAGTGGTTATT
TTCAATACTCTCTTTGGTCTTAGTGTCAACTTTTGGATGGCAGTCATTACACGGTTTCTT
CTCGGTTTCTTAAATGGTTTGATGGGACCAATAAGGGCATATGCTGCGGAAATTTTTCGT
GAAGAATATCAAGCAATGGGAATGTCAACGATTAGTAGTGCATGGGGTATTGGATTGATT
ATTGGCCCAGCTATAGGAGGCTTCTTTGCTCAGCCTGCAGAGAAATATCCGGCTGTATTC
TCAAAGGATTCTATATTTGGGAGATTTCCCTACTTCTTGCCTTGCTTATGCATATCACTG
TTTTCCTTGGTCGTGGGTATTGCTTCATTTTGGCTGCCGGAAACATTACACAATCATGAT
TCAAGAATGCCGCCTCAAAGTTCATACAAGGCTCTGGAGGCTGCATCTGATACGAAAGAA
GGAAACAAATCAACCCCGGCAAAAAGCCTTTTCAAGAACTGGCCATTGATTTCGGCTATC
ATCTTATACTGTGTCTTCGCTCTTCATGATATGGCTTACTCAGAGATATTCTCATTATGG
GCTGTGACCCCCAGAAAGTTTGGAGGCTTAAATTATTCAACTGTTGATGTTGGTGAAGTA
CTATCAATCTCGGGATGCGGCCTACTAGTCTTTCAACTAACTCTGTATCCATTGGTTGAG
AGGTATTTTGGTCCTATTGTCATTGCTCGAATTGCAGGAGTTTTGTCAATTCCCTTGTTG
GCGTGTTACCCTTATATTGCTATGCTCTCTGGGACTGCTCTCTCTGTGGCGATAAATGTT
GCATCCTTGTTGAAGAATGCTTTATCTATCTGTATCATAACAGGGTTGTTCATATTGCAA
AACAAATCAGTGGACCAGCGACAACGTGGAGCTGCTAATGGACTAGCCATGACATCTCAG
TCATTTTTCAAAGCTATCGGTCCAGCAGGGGCAGGAGTACTCTTTTCTTGGGCACAAAAA
AGGCTTGACGCTCCCATTCTTCCAGGTGCTCAAGTAGTATTCTTTGTGCTGAATGTGATT
GAAGCAATTGGTGTGTTGCTGACATTCAAACCATTCCTTGTTGAAACACAAAATACTAAT
TAA