Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008518
CDS Infomation

pacid=37438106 polypeptide=PGSC0003DMP400005913 locus=PGSC0003DMG400003296 ID=PGSC0003DMT400008518.v4.03 annot-version=v4.03
Sequence

ATGAGGAAGAAACTTGATACTCGCTTCCCTGCGGCCCGGATCAAGAAAATTATGCAAGCC
GATGAGGATGTCGGTAAGATTGCAATGGCTGTGCCTGTTCTAGTGTCAAAAGCATTGGAG
TTATTTTTACAAGACCTTTGTGACCGGACATATGACATAACTCTTAGAAGAGGAGCAAAG
ACTGTTAATTCACTGCACTTAAAGCACTGTGTACAAAGCTACAACGTGTTTGACTTTCTT
CGGGAAGTTGTCAGCAAGGTTCCTGATTATGGCCATTCTGATGCTGCTGGTGAAATGCCA
AAAAGAAGGAAAGTTGCTATAGAAGAACATCATGACAGTGAGGATGAATACAAAAAGAGC
AGGACGGAGATGTCTCCTGTTAGCAGTAGTGGTAGGGGAAGAGGTAGGGGTAGAGGAAGA
GGCCGTGGTCGGGTAAGCCGTGCTGATAAGGAGCTCGCACGACCTGATATGCAACTTGAA
TCCTGCACTTCTGCTCAGCAGAGTGGTCAACAAAATCCAAATCCTGGAACTCAGACAGAG
AACTGCTCAGAACCAAAAGAATCACCTAAACAGGATTCCACTGTTGGTGACAAGGAAAAC
TCAGTTGTAACAACTCCTAATCTGAAGGTCGATGTAGATGATAGTACTGATAAACCAGCT
GCACCGGAAATAGCACCCTGCAATCCATCGCCAAGGCCTGTGAACGAGAAAGCAGAGGAA
GGCCCTCAGTGGTCCCTCGAAATGGACAGAATGGTCATCGACCCTGCTCATATGTCGCAA
CTGAATACAAGTGTAGCAGAAGAGGAAGAAGATTATGATGAAGAAGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005913
PEP Infomation

pacid=37438106 transcript=PGSC0003DMT400008518 locus=PGSC0003DMG400003296 ID=PGSC0003DMT400008518.v4.03 annot-version=v4.03
Sequence

MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLRRGAK
TVNSLHLKHCVQSYNVFDFLREVVSKVPDYGHSDAAGEMPKRRKVAIEEHHDSEDEYKKS
RTEMSPVSSSGRGRGRGRGRGRGRVSRADKELARPDMQLESCTSAQQSGQQNPNPGTQTE
NCSEPKESPKQDSTVGDKENSVVTTPNLKVDVDDSTDKPAAPEIAPCNPSPRPVNEKAEE
GPQWSLEMDRMVIDPAHMSQLNTSVAEEEEDYDEEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400008518
Transcript Infomation

pacid=37438106 locus=PGSC0003DMG400003296 ID=PGSC0003DMT400008518.v4.03 annot-version=v4.03
Sequence

ATGAGGAAGAAACTTGATACTCGCTTCCCTGCGGCCCGGATCAAGAAAATTATGCAAGCC
GATGAGGATGTCGGTAAGATTGCAATGGCTGTGCCTGTTCTAGTGTCAAAAGCATTGGAG
TTATTTTTACAAGACCTTTGTGACCGGACATATGACATAACTCTTAGAAGAGGAGCAAAG
ACTGTTAATTCACTGCACTTAAAGCACTGTGTACAAAGCTACAACGTGTTTGACTTTCTT
CGGGAAGTTGTCAGCAAGGTTCCTGATTATGGCCATTCTGATGCTGCTGGTGAAATGCCA
AAAAGAAGGAAAGTTGCTATAGAAGAACATCATGACAGTGAGGATGAATACAAAAAGAGC
AGGACGGAGATGTCTCCTGTTAGCAGTAGTGGTAGGGGAAGAGGTAGGGGTAGAGGAAGA
GGCCGTGGTCGGGTAAGCCGTGCTGATAAGGAGCTCGCACGACCTGATATGCAACTTGAA
TCCTGCACTTCTGCTCAGCAGAGTGGTCAACAAAATCCAAATCCTGGAACTCAGACAGAG
AACTGCTCAGAACCAAAAGAATCACCTAAACAGGATTCCACTGTTGGTGACAAGGAAAAC
TCAGTTGTAACAACTCCTAATCTGAAGGTCGATGTAGATGATAGTACTGATAAACCAGCT
GCACCGGAAATAGCACCCTGCAATCCATCGCCAAGGCCTGTGAACGAGAAAGCAGAGGAA
GGCCCTCAGTGGTCCCTCGAAATGGACAGAATGGTCATCGACCCTGCTCATATGTCGCAA
CTGAATACAAGTGTAGCAGAAGAGGAAGAAGATTATGATGAAGAAGAGTAG