Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008515
CDS Infomation

pacid=37436975 polypeptide=PGSC0003DMP400005910 locus=PGSC0003DMG400003295 ID=PGSC0003DMT400008515.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAGGAGTAGCATCCGTCTTATTTCATACTCGGAAGAGATTATAAATGGTGAA
CCAATCTTTATTTCCTCTAACTGCTGTCCTATTAAAGCTCACAAATATGAGCCTGCTGGA
CTTGCTTTTCACTCTGCTGCTCTTAGACTGATTGGGCATGTTGAGAAAGAAGACCCCAAA
GATGGCAAAGAAGATGTTCCTAATGACAAGGAACAGACATTTGCCTATTCATCAGAGTCA
TACAGCTCTAAGGGGAAAAAGAAGTCTTCTACCGGCGAAAAGGTACAAGATCATTATGCA
TTGTTAGGGTTGAGCAATCTAAGGTATCTTGCTTCTGAGGATCAGATAAGGAAGAGCTAT
CGTGATGCTGCATTGAGGCATCATCCTGACAAGCTGGCTTCACTTCTTCTAGCTGAGGAA
ACTGAAGCTGCAAAACAAGCCAAGAAGGAGGAAATAGAAAACCACTTCAAAGCTATTCAG
GAAGCATATGAGGTTCTTATGGACCCTGTTAGAAGAAGGATTTATGACTCCACTGATGAA
TTTGATGATGAAATCCCAACTGAATGTGCTCCACAAGATTTTTTTAAGGTCTTTGGACCT
GCATTTTTAAGGAATGGTCGTTGGTCCGTCACCCAACCCATCCCTTCATTAGGTGATGAG
AATACTCCAATTAAAGAAGTGGATAGCTTTTATAATTTCTGGTACAGCTTCAAAAGTTGG
AGAGAGTTCCCACATACTGATGAGTTTGATCTTGAACAAGCTGAATCTCGTGATCACAAG
AGGTGGATGGAAAGGCAGAATGCGAAACTTTCAGAGAAGGCCAGAAAGGAAGAAACCGCC
AGGGTGCGTACACTTGTTGACAATGCCTACAGAAAAGACCCTAGAATCTTGGGAAGAAAG
GAGGCGGAGAAAGCAGAGAAGCAGAGAAAGAAGGAAGCTAAACTACTTGCAAAGAAATTA
CAGGAGGAAGAAGCAATTAGGATTGTTGAAGAGGAAAAGCGTAAGAAAGAGGAGGAGGGG
AAAAAAGCTGCTGAAGTTGCTTTGCAGCAGAAGAAGTTGAAGGAGAAAGAAAAGAAATTA
TTGCGAAAAGAGCGTAGTCGTTTAAGAACCCTTGCTGCTCCTGTTTTGTCTCAGCGTTTG
CTTGGGCTAACTGATGACGATGTAGAAGGTCTATGCATGTCACTTGACATTGAGCAACTG
AGGAACTTATGTGATAAAGCCGATGGAAAGGGTGAGCTTGTTATCTCTGAACTTCTCAGG
GGAGCACTTGGACATGAACACAACCCAAAATATGAGAATAAAGATGAAAAGATTAAGTCG
CAGCAAAATGGTTCTCTGGAGAGTAAAAAACAAGTTCCTCTGATGAGCAGTGAGAAAAAG
GAGAAACCTTGGAGCAAAGAAGAAATTGATCTTTTGAGGAAGGGGATGCTGAAATATCCT
AAAGGAACTTCTCGAAGATGGGAAGTTATTTCTGATTATATTGGTACCGCAAGGACAGTT
GAAGAGATCCTGAAGGCTACAAAAACAGTTCTGCTCCAGAAACCCGACTCTGCTAAAGCC
TTTGACTCCTTCCTTGAGAAAAGAAAGCCAGCACCAACTATTGTTTCTCCTCTTTCCACG
AGGGAAGAAGTAGAGGGAGTAGAAAATAGTAGCAAGCCTGAAAGTGGAAGTGCCAAAGTA
GCTGATTCTCAGGAGACCCCTAGTCAAAACACAAACAGCCAGAACACTGATGACGCACCT
GCAGCAAACGGAGTTTCTTCGAGTTCTGATTCAGACATATGGTCTGCTGTTCAAGAAAAA
GCTTTAGTTCAAGCTCTGAAAACCTTCCCCAAGGAAACCAGCCAGCGGTGGGAACGAGTT
GCAACTGCTGTCCCTGGGAAGACCATGAACCAGTGTAAAAAAAAGTTTGCATTACTCAAA
GAGAATTTCAGGAACAAGAAAAGTGCAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005910
PEP Infomation

pacid=37436975 transcript=PGSC0003DMT400008515 locus=PGSC0003DMG400003295 ID=PGSC0003DMT400008515.v4.03 annot-version=v4.03
Sequence

MASRSSIRLISYSEEIINGEPIFISSNCCPIKAHKYEPAGLAFHSAALRLIGHVEKEDPK
DGKEDVPNDKEQTFAYSSESYSSKGKKKSSTGEKVQDHYALLGLSNLRYLASEDQIRKSY
RDAALRHHPDKLASLLLAEETEAAKQAKKEEIENHFKAIQEAYEVLMDPVRRRIYDSTDE
FDDEIPTECAPQDFFKVFGPAFLRNGRWSVTQPIPSLGDENTPIKEVDSFYNFWYSFKSW
REFPHTDEFDLEQAESRDHKRWMERQNAKLSEKARKEETARVRTLVDNAYRKDPRILGRK
EAEKAEKQRKKEAKLLAKKLQEEEAIRIVEEEKRKKEEEGKKAAEVALQQKKLKEKEKKL
LRKERSRLRTLAAPVLSQRLLGLTDDDVEGLCMSLDIEQLRNLCDKADGKGELVISELLR
GALGHEHNPKYENKDEKIKSQQNGSLESKKQVPLMSSEKKEKPWSKEEIDLLRKGMLKYP
KGTSRRWEVISDYIGTARTVEEILKATKTVLLQKPDSAKAFDSFLEKRKPAPTIVSPLST
REEVEGVENSSKPESGSAKVADSQETPSQNTNSQNTDDAPAANGVSSSSDSDIWSAVQEK
ALVQALKTFPKETSQRWERVATAVPGKTMNQCKKKFALLKENFRNKKSAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400008515
Transcript Infomation

pacid=37436975 locus=PGSC0003DMG400003295 ID=PGSC0003DMT400008515.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAGGAGTAGCATCCGTCTTATTTCATACTCGGAAGAGATTATAAATGGTGAA
CCAATCTTTATTTCCTCTAACTGCTGTCCTATTAAAGCTCACAAATATGAGCCTGCTGGA
CTTGCTTTTCACTCTGCTGCTCTTAGACTGATTGGGCATGTTGAGAAAGAAGACCCCAAA
GATGGCAAAGAAGATGTTCCTAATGACAAGGAACAGACATTTGCCTATTCATCAGAGTCA
TACAGCTCTAAGGGGAAAAAGAAGTCTTCTACCGGCGAAAAGGTACAAGATCATTATGCA
TTGTTAGGGTTGAGCAATCTAAGGTATCTTGCTTCTGAGGATCAGATAAGGAAGAGCTAT
CGTGATGCTGCATTGAGGCATCATCCTGACAAGCTGGCTTCACTTCTTCTAGCTGAGGAA
ACTGAAGCTGCAAAACAAGCCAAGAAGGAGGAAATAGAAAACCACTTCAAAGCTATTCAG
GAAGCATATGAGGTTCTTATGGACCCTGTTAGAAGAAGGATTTATGACTCCACTGATGAA
TTTGATGATGAAATCCCAACTGAATGTGCTCCACAAGATTTTTTTAAGGTCTTTGGACCT
GCATTTTTAAGGAATGGTCGTTGGTCCGTCACCCAACCCATCCCTTCATTAGGTGATGAG
AATACTCCAATTAAAGAAGTGGATAGCTTTTATAATTTCTGGTACAGCTTCAAAAGTTGG
AGAGAGTTCCCACATACTGATGAGTTTGATCTTGAACAAGCTGAATCTCGTGATCACAAG
AGGTGGATGGAAAGGCAGAATGCGAAACTTTCAGAGAAGGCCAGAAAGGAAGAAACCGCC
AGGGTGCGTACACTTGTTGACAATGCCTACAGAAAAGACCCTAGAATCTTGGGAAGAAAG
GAGGCGGAGAAAGCAGAGAAGCAGAGAAAGAAGGAAGCTAAACTACTTGCAAAGAAATTA
CAGGAGGAAGAAGCAATTAGGATTGTTGAAGAGGAAAAGCGTAAGAAAGAGGAGGAGGGG
AAAAAAGCTGCTGAAGTTGCTTTGCAGCAGAAGAAGTTGAAGGAGAAAGAAAAGAAATTA
TTGCGAAAAGAGCGTAGTCGTTTAAGAACCCTTGCTGCTCCTGTTTTGTCTCAGCGTTTG
CTTGGGCTAACTGATGACGATGTAGAAGGTCTATGCATGTCACTTGACATTGAGCAACTG
AGGAACTTATGTGATAAAGCCGATGGAAAGGGTGAGCTTGTTATCTCTGAACTTCTCAGG
GGAGCACTTGGACATGAACACAACCCAAAATATGAGAATAAAGATGAAAAGATTAAGTCG
CAGCAAAATGGTTCTCTGGAGAGTAAAAAACAAGTTCCTCTGATGAGCAGTGAGAAAAAG
GAGAAACCTTGGAGCAAAGAAGAAATTGATCTTTTGAGGAAGGGGATGCTGAAATATCCT
AAAGGAACTTCTCGAAGATGGGAAGTTATTTCTGATTATATTGGTACCGCAAGGACAGTT
GAAGAGATCCTGAAGGCTACAAAAACAGTTCTGCTCCAGAAACCCGACTCTGCTAAAGCC
TTTGACTCCTTCCTTGAGAAAAGAAAGCCAGCACCAACTATTGTTTCTCCTCTTTCCACG
AGGGAAGAAGTAGAGGGAGTAGAAAATAGTAGCAAGCCTGAAAGTGGAAGTGCCAAAGTA
GCTGATTCTCAGGAGACCCCTAGTCAAAACACAAACAGCCAGAACACTGATGACGCACCT
GCAGCAAACGGAGTTTCTTCGAGTTCTGATTCAGACATATGGTCTGCTGTTCAAGAAAAA
GCTTTAGTTCAAGCTCTGAAAACCTTCCCCAAGGAAACCAGCCAGCGGTGGGAACGAGTT
GCAACTGCTGTCCCTGGGAAGACCATGAACCAGTGTAAAAAAAAGTTTGCATTACTCAAA
GAGAATTTCAGGAACAAGAAAAGTGCAGTGTGA