Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008475
CDS Infomation

pacid=37444219 polypeptide=PGSC0003DMP400005885 locus=PGSC0003DMG400003280 ID=PGSC0003DMT400008475.v4.03 annot-version=v4.03
Sequence

ATGGCCGCTGTCCTCTTCCAGCTCCACCACCTTATTTTCTTATTTGTTTTTTTCCTATCT
CATCCAACTCCTTGTGTTTCCATTGGAGATGATCAAGTCCTTCTTGAATTTAAAGAATTG
TTATTAAATACCTCACTTCTTGATTCTTCTTGGAAAAAAGGAACAAATCCTTGTGATAAT
AATAACAAATGGTTTGGTGTACAATGTGATAATAAAAATGTTATTCAAGCCCTACTTCTT
GGTGGGGTTGGCCTTTCAGGGAATCTTGATGTTGATGTACTAATTAGCCTTCAAGGCCTT
AGAGTTGTTAATCTTGCAAACAACTCTTTCTCAGGAACAATTCCTGATTTTTTTAGGCTT
GGTGCTCTCAAGTCTTTATTCATTAATGGAAACCAGTTTTCCGGAGACATCCCTGGAGAT
TTCTTCTCCAAAATGGGATCTCTCAGGAAAATATGGTTTTCGCGGAACAAGTTTTCAGGG
AAAATCCCTGATTCTTTAGCAGGTTTAAAATATCTTTTAGAACTCCATTTGGAGAATAAT
GAATTCACAGGACCTATTCCAATTTTGTCACAGGCTAATCTAGCAACTATAAACTTCTCA
AACAATAAATTACAAGGTTTAATTCCGCAAAGTTTGTCTAAGTTTGGTTCGAACCCCTTT
CAAGGAAATCCTGATTTGTGTGGAAATCAAATAGGGAGGGAGTGTAAGGCTGTAGCCTCT
GGTGAAAAGTCTGAAGGTTCTGGAAGTACAAAATGGATAATTATAGGCTTAGTGGTTGTT
TTGCTATTGGTGGCTATATTATTTAAGTCAAAGCGTAAGGATGATCAATTTGAAAAGCTT
GAAAAAGAGAGCCTTGATGAGGCTGTGAAGGTGCACCTTAACAAGAGAAGCATGAGCACG
CGCACCTCTATGCGTTCATCAAGGAAAGGACGCTCAAGAAGTGGCAGCGATATGGGTGAT
CTAGTTGTGGTAAATGATGAAAAGGGTATATTTGGGATGCCTGATTTGATGAAGGCAGCA
GCTGAAGTCCTTGGTAATGGAGGATTGGGGTCAGCTTACAAGGCGGTATTGGGGAATGGA
GTGTCCGTCGTGGTGAAGAGGTTGAGGGAAACCAATAAATTTAACAAGGAAAGTTTTGAT
GCAGAGATCAGACGACTCGCTAGGATAAGGCACAGGAACATATTGCAACCATTAGCATAC
CATTACAGGAAAGAGGAGAAGTTGGTGGTGTCTGAATACATTCCCAAAGGCAGCCTGTTA
TACCTATTACATGGTGATCGGGGGATAGCACATGCTCAGCTAAATTGGACTATTCGCGTT
AAAATCATCCTGGGAGTTGCCAGTGGAATGAAATTTCTTCATTCAGAGTTTGCATCATAT
GATGTACCTCATGGGAACCTTAAGTCTAGCAACATTCTTCTTTCTGCAAATAATGAACCA
CTTCTCACAGATTATGCGTTTTATCCACTACTCAACGATTCACAAGCTGTCCAATCTCTT
TTTGCTTATAAATCCCCAGAAGCCATACTAAACCAACAAGTCACTCCAAAAAGTGATGTA
TATTGTCTTGGAATCATAATACTTGAAATCCTAACTGGGAAATTCCCATCACAATATCTC
AGCAACCAAAAGTGTGGAACTGACGTTGCACAATGGGCGTGGTCAGCAATTGAAGAGAAT
AGAGTATCAGAATTGATTGCTCCAGAGATAGAAACAGAAAAGGATTCCCTTGAAATGATG
GAGAAGTTCCTTCATATAGGAGCTGCATGCACTGAGAGTGATCATGATAATAGAATCGAC
ATGAAGGAAGCCATAAGGAGGATAGAAGAGATAACAAATTTAATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005885
PEP Infomation

pacid=37444219 transcript=PGSC0003DMT400008475 locus=PGSC0003DMG400003280 ID=PGSC0003DMT400008475.v4.03 annot-version=v4.03
Sequence

MAAVLFQLHHLIFLFVFFLSHPTPCVSIGDDQVLLEFKELLLNTSLLDSSWKKGTNPCDN
NNKWFGVQCDNKNVIQALLLGGVGLSGNLDVDVLISLQGLRVVNLANNSFSGTIPDFFRL
GALKSLFINGNQFSGDIPGDFFSKMGSLRKIWFSRNKFSGKIPDSLAGLKYLLELHLENN
EFTGPIPILSQANLATINFSNNKLQGLIPQSLSKFGSNPFQGNPDLCGNQIGRECKAVAS
GEKSEGSGSTKWIIIGLVVVLLLVAILFKSKRKDDQFEKLEKESLDEAVKVHLNKRSMST
RTSMRSSRKGRSRSGSDMGDLVVVNDEKGIFGMPDLMKAAAEVLGNGGLGSAYKAVLGNG
VSVVVKRLRETNKFNKESFDAEIRRLARIRHRNILQPLAYHYRKEEKLVVSEYIPKGSLL
YLLHGDRGIAHAQLNWTIRVKIILGVASGMKFLHSEFASYDVPHGNLKSSNILLSANNEP
LLTDYAFYPLLNDSQAVQSLFAYKSPEAILNQQVTPKSDVYCLGIIILEILTGKFPSQYL
SNQKCGTDVAQWAWSAIEENRVSELIAPEIETEKDSLEMMEKFLHIGAACTESDHDNRID
MKEAIRRIEEITNLM*

Transcript Sequence

Transcript ID

PGSC0003DMT400008475
Transcript Infomation

pacid=37444219 locus=PGSC0003DMG400003280 ID=PGSC0003DMT400008475.v4.03 annot-version=v4.03
Sequence

ATGGCCGCTGTCCTCTTCCAGCTCCACCACCTTATTTTCTTATTTGTTTTTTTCCTATCT
CATCCAACTCCTTGTGTTTCCATTGGAGATGATCAAGTCCTTCTTGAATTTAAAGAATTG
TTATTAAATACCTCACTTCTTGATTCTTCTTGGAAAAAAGGAACAAATCCTTGTGATAAT
AATAACAAATGGTTTGGTGTACAATGTGATAATAAAAATGTTATTCAAGCCCTACTTCTT
GGTGGGGTTGGCCTTTCAGGGAATCTTGATGTTGATGTACTAATTAGCCTTCAAGGCCTT
AGAGTTGTTAATCTTGCAAACAACTCTTTCTCAGGAACAATTCCTGATTTTTTTAGGCTT
GGTGCTCTCAAGTCTTTATTCATTAATGGAAACCAGTTTTCCGGAGACATCCCTGGAGAT
TTCTTCTCCAAAATGGGATCTCTCAGGAAAATATGGTTTTCGCGGAACAAGTTTTCAGGG
AAAATCCCTGATTCTTTAGCAGGTTTAAAATATCTTTTAGAACTCCATTTGGAGAATAAT
GAATTCACAGGACCTATTCCAATTTTGTCACAGGCTAATCTAGCAACTATAAACTTCTCA
AACAATAAATTACAAGGTTTAATTCCGCAAAGTTTGTCTAAGTTTGGTTCGAACCCCTTT
CAAGGAAATCCTGATTTGTGTGGAAATCAAATAGGGAGGGAGTGTAAGGCTGTAGCCTCT
GGTGAAAAGTCTGAAGGTTCTGGAAGTACAAAATGGATAATTATAGGCTTAGTGGTTGTT
TTGCTATTGGTGGCTATATTATTTAAGTCAAAGCGTAAGGATGATCAATTTGAAAAGCTT
GAAAAAGAGAGCCTTGATGAGGCTGTGAAGGTGCACCTTAACAAGAGAAGCATGAGCACG
CGCACCTCTATGCGTTCATCAAGGAAAGGACGCTCAAGAAGTGGCAGCGATATGGGTGAT
CTAGTTGTGGTAAATGATGAAAAGGGTATATTTGGGATGCCTGATTTGATGAAGGCAGCA
GCTGAAGTCCTTGGTAATGGAGGATTGGGGTCAGCTTACAAGGCGGTATTGGGGAATGGA
GTGTCCGTCGTGGTGAAGAGGTTGAGGGAAACCAATAAATTTAACAAGGAAAGTTTTGAT
GCAGAGATCAGACGACTCGCTAGGATAAGGCACAGGAACATATTGCAACCATTAGCATAC
CATTACAGGAAAGAGGAGAAGTTGGTGGTGTCTGAATACATTCCCAAAGGCAGCCTGTTA
TACCTATTACATGGTGATCGGGGGATAGCACATGCTCAGCTAAATTGGACTATTCGCGTT
AAAATCATCCTGGGAGTTGCCAGTGGAATGAAATTTCTTCATTCAGAGTTTGCATCATAT
GATGTACCTCATGGGAACCTTAAGTCTAGCAACATTCTTCTTTCTGCAAATAATGAACCA
CTTCTCACAGATTATGCGTTTTATCCACTACTCAACGATTCACAAGCTGTCCAATCTCTT
TTTGCTTATAAATCCCCAGAAGCCATACTAAACCAACAAGTCACTCCAAAAAGTGATGTA
TATTGTCTTGGAATCATAATACTTGAAATCCTAACTGGGAAATTCCCATCACAATATCTC
AGCAACCAAAAGTGTGGAACTGACGTTGCACAATGGGCGTGGTCAGCAATTGAAGAGAAT
AGAGTATCAGAATTGATTGCTCCAGAGATAGAAACAGAAAAGGATTCCCTTGAAATGATG
GAGAAGTTCCTTCATATAGGAGCTGCATGCACTGAGAGTGATCATGATAATAGAATCGAC
ATGAAGGAAGCCATAAGGAGGATAGAAGAGATAACAAATTTAATGTAG