Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008354
CDS Infomation

pacid=37462052 polypeptide=PGSC0003DMP400005815 locus=PGSC0003DMG400003221 ID=PGSC0003DMT400008354.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCCCTACAATTCTTCCTTTTTCTTTTTTGTCTTTGTTCTATTAATTGCCACT
GCAGTGGCAGAGATCCGATCCACGCAGATCCGATCCGATTCTCGTTCTACCATCCCATTT
GACGAATTCGGGTACACCCATTTCGGCCGTCTCAATCTCACCGTCACCGACATCTCATTC
TCCAACCCGAAATCCGGACCCGAACCCGTTCTATCCGAATTGGGTTTCTTCCTCGTCACC
CGTGAAGCTTGGCAGCATGTTCTTGAGCAACTCCAAGATGGTGATATCCGGTGTACTCTC
CATTCAGATCTCGTCAAAAGGGTTTTCACTTTTGATCAATTGCAATCCTCTGCTCGTCAA
TTCACAACTTCGTTTAGTGTATCTGATGCGAATCAATTCACTCTTGTTTTTGCCAATTGC
ATGCCTAATTTGGTGATTTCAATGAATGTTCACTCGGTTATGTACAATTTCAACCCGAAA
GGTGGGCAGCTTGATTTTCTGTCGGCAGGCAAGACTGCTCTTCCAGCGATTTACTATTTG
TTTTTCGTAGTCTATGTGTTGATGGGGTCTTTTTGGGTTTTTGCACTTTACAAGAAAAGG
TTATCTGTTTATGGAATTCATTTCTTTATGCTTGCTGTTGTGATCTTGAAAGCATTGAAT
TTGCTGTGTGAGGCTGAGGATAAATCGTATATTAAGAAAACTGGTACTGCTCATGGGTGG
GATGTTTTGTTCTATATATTTAGCTTCTTGAAGGGTATTACTCTGTTCACTCTGATAGTT
TTGATTGGAACTGGTTGGTCATTTTTGAAGCCTTACTTGCAAGATAAAGAGAAGAAGGTT
TTGATGATTGTTATTCCTTTGCAAGTTGTGGCCAATCTTGCACAGGTTGTGATTGATGAA
ACTGGACCCTTTGGTGAAAATTCATACACATGGAAGCAGGTTTTCCTGCTTGTTGATATT
GTGTGTTGTTGTGCTGTATTGTTTCCGATTGTGTGGTCGATTAAGAACTTGCGAGAGGCA
GCTAAGACTGATGGCAAAGCTGCAGTGAATTTGATGAAGTTGACATTATTCAGGCAGTAC
TACGTTATCGTGATATGTTACATATACTTCACAAGAGTTGTGGTTTATGCTCTGGAGACC
ATCACCTCTTATCGGTATCAGTGGACTAGTGTGGTGGCTGCTGAAGCTGCAACACTTGCC
TTCTATGCCTTTACGGGGTATAACTTCAGGCCTAAGGTACACAATCCATATTTTGCGATT
GATGATGAGGAGGAAGAAGCTGCTTCTGAGGCTCTCAAGCTTGAAGATGAATTTGAATTA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400005815
PEP Infomation

pacid=37462052 transcript=PGSC0003DMT400008354 locus=PGSC0003DMG400003221 ID=PGSC0003DMT400008354.v4.03 annot-version=v4.03
Sequence

MAAPYNSSFFFFVFVLLIATAVAEIRSTQIRSDSRSTIPFDEFGYTHFGRLNLTVTDISF
SNPKSGPEPVLSELGFFLVTREAWQHVLEQLQDGDIRCTLHSDLVKRVFTFDQLQSSARQ
FTTSFSVSDANQFTLVFANCMPNLVISMNVHSVMYNFNPKGGQLDFLSAGKTALPAIYYL
FFVVYVLMGSFWVFALYKKRLSVYGIHFFMLAVVILKALNLLCEAEDKSYIKKTGTAHGW
DVLFYIFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANLAQVVIDE
TGPFGENSYTWKQVFLLVDIVCCCAVLFPIVWSIKNLREAAKTDGKAAVNLMKLTLFRQY
YVIVICYIYFTRVVVYALETITSYRYQWTSVVAAEAATLAFYAFTGYNFRPKVHNPYFAI
DDEEEEAASEALKLEDEFEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400008354
Transcript Infomation

pacid=37462052 locus=PGSC0003DMG400003221 ID=PGSC0003DMT400008354.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCCCTACAATTCTTCCTTTTTCTTTTTTGTCTTTGTTCTATTAATTGCCACT
GCAGTGGCAGAGATCCGATCCACGCAGATCCGATCCGATTCTCGTTCTACCATCCCATTT
GACGAATTCGGGTACACCCATTTCGGCCGTCTCAATCTCACCGTCACCGACATCTCATTC
TCCAACCCGAAATCCGGACCCGAACCCGTTCTATCCGAATTGGGTTTCTTCCTCGTCACC
CGTGAAGCTTGGCAGCATGTTCTTGAGCAACTCCAAGATGGTGATATCCGGTGTACTCTC
CATTCAGATCTCGTCAAAAGGGTTTTCACTTTTGATCAATTGCAATCCTCTGCTCGTCAA
TTCACAACTTCGTTTAGTGTATCTGATGCGAATCAATTCACTCTTGTTTTTGCCAATTGC
ATGCCTAATTTGGTGATTTCAATGAATGTTCACTCGGTTATGTACAATTTCAACCCGAAA
GGTGGGCAGCTTGATTTTCTGTCGGCAGGCAAGACTGCTCTTCCAGCGATTTACTATTTG
TTTTTCGTAGTCTATGTGTTGATGGGGTCTTTTTGGGTTTTTGCACTTTACAAGAAAAGG
TTATCTGTTTATGGAATTCATTTCTTTATGCTTGCTGTTGTGATCTTGAAAGCATTGAAT
TTGCTGTGTGAGGCTGAGGATAAATCGTATATTAAGAAAACTGGTACTGCTCATGGGTGG
GATGTTTTGTTCTATATATTTAGCTTCTTGAAGGGTATTACTCTGTTCACTCTGATAGTT
TTGATTGGAACTGGTTGGTCATTTTTGAAGCCTTACTTGCAAGATAAAGAGAAGAAGGTT
TTGATGATTGTTATTCCTTTGCAAGTTGTGGCCAATCTTGCACAGGTTGTGATTGATGAA
ACTGGACCCTTTGGTGAAAATTCATACACATGGAAGCAGGTTTTCCTGCTTGTTGATATT
GTGTGTTGTTGTGCTGTATTGTTTCCGATTGTGTGGTCGATTAAGAACTTGCGAGAGGCA
GCTAAGACTGATGGCAAAGCTGCAGTGAATTTGATGAAGTTGACATTATTCAGGCAGTAC
TACGTTATCGTGATATGTTACATATACTTCACAAGAGTTGTGGTTTATGCTCTGGAGACC
ATCACCTCTTATCGGTATCAGTGGACTAGTGTGGTGGCTGCTGAAGCTGCAACACTTGCC
TTCTATGCCTTTACGGGGTATAACTTCAGGCCTAAGGTACACAATCCATATTTTGCGATT
GATGATGAGGAGGAAGAAGCTGCTTCTGAGGCTCTCAAGCTTGAAGATGAATTTGAATTA
TAG