Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008340
CDS Infomation

pacid=37462982 polypeptide=PGSC0003DMP400005804 locus=PGSC0003DMG400003213 ID=PGSC0003DMT400008340.v4.03 annot-version=v4.03
Sequence

ATGGGGCAGTGTTGCAGTAAGGGTGTTTCCGGTGATAATGGTGGTAGCGTTGTTGCTGTC
GGAGATGGAAACTCTGCGGTATCTACCAACAATCGCCCTAAACCACCACCTTCACCGGTA
CGTCAATCAGTCGGGAATGGGATGAGTTACACCAACAACAGTACGCCAGCTCACTCATTT
ACAGCCAGTCCGTTTCAGAGCCCGTATCCTGCCGGAATAGCTCCATCTCCATCTCCCGTT
GGAACACCGAGAAGGAAATTCAAGTGGCCATTTCCACCGCCATCGCCGGCGAAACCTATA
TTATCAGCTATCTTTAAGCGACAGGGAGGGACGTCAGTAAAGCCGAAAGAAGGGCCAATA
CCGGAAGATGAAGGTGGTGAAGGTGAGGGACAACTTGATAAAAGCTTTGGCTATCCACAG
AATTTGACATCAAAGTATGAATTGGGAAAGGAGGTGGGTCGAGGGCATTTCGGCCATACT
TGTTGGGCAAAAGGTAAAAAAGGCGAACTCAAAAATCAGCCAGTGGCTGTGAAGATCATT
TCCAAAGCTAAGATGACAACTGCTATCTCTATCGAAGATGTTCGCAGGGAGGTGAAGATA
TTGAAAGCCTTATCTGGACATCAGAATCTTGTCAAGTTTTATGATGCATTTGAGGATGCC
AACAATGTCTACATAGTAATGGAGTTATGTGAAGGCGGGGAACTATTGGACAGAATTCTA
TCAAGAGGTGGGAGATACACAGAGGAGGATGCCAAAAGTATTGTGGTTCAAATACTAAAT
GTTGTCGCCTTTTGTCATCTTCAAGGTGTGGTGCACCGTGATCTGAAGCCCGAGAACTTT
CTTTTTGCAAAGAAAGACGAGGATTCACCAATGAAGGTGATTGATTTTGGTCTATCAGAT
TTCATTAAACCAGATCAACGTCTTAACGATATTGTTGGCAGTGCATATTATGTTGCTCCT
GAAGTACTTCATAGGTCATATAGCATTGAAGCAGATATGTGGAGTATTGGTGTGATAACT
TATATCTTGTTATGTGGAAGTAGACCTTTCTGGGCACGTACAGAGTCTGGCATTTTCCGT
TCTGTGTTACGAGCTGATCCTAATTTTGAGGACTCGCCTTGGCCTGCAGTGTCAGCAGAG
GCCAGAGATTTTGTGAAAAGGCTTTTGAATAAAGACCATAGGAAGAGAATGACTGCTTCT
CAAGCACTGACTCATCCATGGTTAAGGACTGAAAATCCTTTTATACCCTTAGACATATTG
ATCTTTAAATTAGTCAAGACTTATATTCGAACATCACCCTTGAAACGTGCAGCACTGAAG
GCTCTTTCAAAAGCATTGACAGAAGAAGAGTTAATATACCTCAAGGCTCAATTCAATTTA
TTGGAACCGAAAGCTGGTTCTGTGTCACTCGATAATTTTAGGATGGCACTTATGAAACAA
ACAACTGATGCCATGAGGGAGGCCAGAGTTCTTGACATCATAAATTTGCTGGAACCATTA
TCTTATAAGCAAATGGAGTTTGAAGAGTTCTGTGCTGCTGCAATTAGTACATATCAGCTT
GAGGCTCTTGAAAACTGGGAACATATTGCTAGTGCCGCTTTCAATTATTTTGAGCAAGAA
GGAAACCGTGTCATTTCTATTGAGGAATTAGCTCAGGAAATGAATTTGGGCCCTACGGCT
TACGCTTTTCTCAAGGATTGGATCAGACCATCCGATAGGAAATTGAGTTTCCTTGGGTAT
ACCAAATTTTTGCATGGTGTGACAATGCGAAGTTCAAGCACAAGACATCATCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400005804
PEP Infomation

pacid=37462982 transcript=PGSC0003DMT400008340 locus=PGSC0003DMG400003213 ID=PGSC0003DMT400008340.v4.03 annot-version=v4.03
Sequence

MGQCCSKGVSGDNGGSVVAVGDGNSAVSTNNRPKPPPSPVRQSVGNGMSYTNNSTPAHSF
TASPFQSPYPAGIAPSPSPVGTPRRKFKWPFPPPSPAKPILSAIFKRQGGTSVKPKEGPI
PEDEGGEGEGQLDKSFGYPQNLTSKYELGKEVGRGHFGHTCWAKGKKGELKNQPVAVKII
SKAKMTTAISIEDVRREVKILKALSGHQNLVKFYDAFEDANNVYIVMELCEGGELLDRIL
SRGGRYTEEDAKSIVVQILNVVAFCHLQGVVHRDLKPENFLFAKKDEDSPMKVIDFGLSD
FIKPDQRLNDIVGSAYYVAPEVLHRSYSIEADMWSIGVITYILLCGSRPFWARTESGIFR
SVLRADPNFEDSPWPAVSAEARDFVKRLLNKDHRKRMTASQALTHPWLRTENPFIPLDIL
IFKLVKTYIRTSPLKRAALKALSKALTEEELIYLKAQFNLLEPKAGSVSLDNFRMALMKQ
TTDAMREARVLDIINLLEPLSYKQMEFEEFCAAAISTYQLEALENWEHIASAAFNYFEQE
GNRVISIEELAQEMNLGPTAYAFLKDWIRPSDRKLSFLGYTKFLHGVTMRSSSTRHHR*

Transcript Sequence

Transcript ID

PGSC0003DMT400008340
Transcript Infomation

pacid=37462982 locus=PGSC0003DMG400003213 ID=PGSC0003DMT400008340.v4.03 annot-version=v4.03
Sequence

ATGGGGCAGTGTTGCAGTAAGGGTGTTTCCGGTGATAATGGTGGTAGCGTTGTTGCTGTC
GGAGATGGAAACTCTGCGGTATCTACCAACAATCGCCCTAAACCACCACCTTCACCGGTA
CGTCAATCAGTCGGGAATGGGATGAGTTACACCAACAACAGTACGCCAGCTCACTCATTT
ACAGCCAGTCCGTTTCAGAGCCCGTATCCTGCCGGAATAGCTCCATCTCCATCTCCCGTT
GGAACACCGAGAAGGAAATTCAAGTGGCCATTTCCACCGCCATCGCCGGCGAAACCTATA
TTATCAGCTATCTTTAAGCGACAGGGAGGGACGTCAGTAAAGCCGAAAGAAGGGCCAATA
CCGGAAGATGAAGGTGGTGAAGGTGAGGGACAACTTGATAAAAGCTTTGGCTATCCACAG
AATTTGACATCAAAGTATGAATTGGGAAAGGAGGTGGGTCGAGGGCATTTCGGCCATACT
TGTTGGGCAAAAGGTAAAAAAGGCGAACTCAAAAATCAGCCAGTGGCTGTGAAGATCATT
TCCAAAGCTAAGATGACAACTGCTATCTCTATCGAAGATGTTCGCAGGGAGGTGAAGATA
TTGAAAGCCTTATCTGGACATCAGAATCTTGTCAAGTTTTATGATGCATTTGAGGATGCC
AACAATGTCTACATAGTAATGGAGTTATGTGAAGGCGGGGAACTATTGGACAGAATTCTA
TCAAGAGGTGGGAGATACACAGAGGAGGATGCCAAAAGTATTGTGGTTCAAATACTAAAT
GTTGTCGCCTTTTGTCATCTTCAAGGTGTGGTGCACCGTGATCTGAAGCCCGAGAACTTT
CTTTTTGCAAAGAAAGACGAGGATTCACCAATGAAGGTGATTGATTTTGGTCTATCAGAT
TTCATTAAACCAGATCAACGTCTTAACGATATTGTTGGCAGTGCATATTATGTTGCTCCT
GAAGTACTTCATAGGTCATATAGCATTGAAGCAGATATGTGGAGTATTGGTGTGATAACT
TATATCTTGTTATGTGGAAGTAGACCTTTCTGGGCACGTACAGAGTCTGGCATTTTCCGT
TCTGTGTTACGAGCTGATCCTAATTTTGAGGACTCGCCTTGGCCTGCAGTGTCAGCAGAG
GCCAGAGATTTTGTGAAAAGGCTTTTGAATAAAGACCATAGGAAGAGAATGACTGCTTCT
CAAGCACTGACTCATCCATGGTTAAGGACTGAAAATCCTTTTATACCCTTAGACATATTG
ATCTTTAAATTAGTCAAGACTTATATTCGAACATCACCCTTGAAACGTGCAGCACTGAAG
GCTCTTTCAAAAGCATTGACAGAAGAAGAGTTAATATACCTCAAGGCTCAATTCAATTTA
TTGGAACCGAAAGCTGGTTCTGTGTCACTCGATAATTTTAGGATGGCACTTATGAAACAA
ACAACTGATGCCATGAGGGAGGCCAGAGTTCTTGACATCATAAATTTGCTGGAACCATTA
TCTTATAAGCAAATGGAGTTTGAAGAGTTCTGTGCTGCTGCAATTAGTACATATCAGCTT
GAGGCTCTTGAAAACTGGGAACATATTGCTAGTGCCGCTTTCAATTATTTTGAGCAAGAA
GGAAACCGTGTCATTTCTATTGAGGAATTAGCTCAGGAAATGAATTTGGGCCCTACGGCT
TACGCTTTTCTCAAGGATTGGATCAGACCATCCGATAGGAAATTGAGTTTCCTTGGGTAT
ACCAAATTTTTGCATGGTGTGACAATGCGAAGTTCAAGCACAAGACATCATCGATAA