Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008335
CDS Infomation

pacid=37463568 polypeptide=PGSC0003DMP400005799 locus=PGSC0003DMG400003210 ID=PGSC0003DMT400008335.v4.03 annot-version=v4.03
Sequence

ATGTTCTTGTTTCTGGTTAATTGCCTTTTCTTCTTTGCCAATTTATTTGCAGTCTTTTCG
ACCTCATCGCCTCAAGATTCTGTTCATCTACTTGGGTTTCACAGCAGTCTTCCAGAGCTC
TCTCAACAATTGCTCCCTTGGAATCAGTCTGTCTCACACTGCCGATGGAAAGGTGTTACC
TGCTATTCAGACATAACTTCTCATGTCAAATCATTGATTCTAACAGACTTATTGCTACCT
GGAACCTTGGACAAGGCCTTTCCTAATCTCTGCCGTCTTCCTCGCTTGGTTTCTCTTGAT
CTCAGTGGCAACCATTTCACTGGTGGCATCCCTGATATGCTTGCTAACTGCAGCCAACTT
GACACGATTCTACTCAATGAAAACAGATTTTCAGGATCCATCCCACCAGAGATTTTCAAA
TCAAGCAAACTCATAAAACTTGATTTGGGTTTAAACCAGCTCACTGGCACTATTCCCTCT
GAGGTAAGCCTTTCTACAAACCTTCAACATCTCGGGCTGTGGAACAATTTCCTTAGTGGA
AATATTCCAAAAGAGCTATTTGATTTGCCAAACTTGACACATCTCCACCTCTACACAAAC
GAGCTGACAGGACCTCTACCCGACTTCCCATTCTCGTGCTCCCTTTCCGAGTTCTTTATT
TATGAGAACCGGTTCTCAGGTTCTTTGCCAATTACCCTAGGCAATTGTCACAACCTTACT
TCATTCTCTGCATCATCTGCTCATCTTGGAGGAGTTATTTCACCAGAGGTTTTTAGGGAC
CTTTCAAATCTTGAATTTCTCTATTTGGATGAGAACAACTTTGAAGGGGGAATTCCTGAG
ACCTTATGGGATGGGAGCTTACAAGAGTTAGCTCTTTCCTTGAATAAATTTAATGGTAGT
ATATCCGAAAAGATTGGTGGTTCTCTTCAGATAAATTACATTGATTTGTCAGTTAACAAA
TTAACTGGTCAGCTTCCAAGATCAGTTGGACGTCTGAAGAATCTGAACAAGCTTTTTCTG
TATGATAACATGCTTAGTGGTTCATTACCAGCAGAACTTGGGAACTGCACTTCTCTTGTT
GCGATAAGTCTCGCCACTAACTTCATCGGTGGGGAAATTCCTCAAGAGCTCTGCAACCTT
CACTCCCTAATAAAATTTCAAGTGTACGGAAATCAAATTCAGGGCCAAATTCCAGAATGC
ATTGGCAGAATAAGTGGACTGGAGGAGCTGGATCTTAGTGAGAACCGATTGATCGGCAAG
ATACCACCTGGAATCACAAATATGACGAAACTTGTGTTACTCTCTTTGGCTCATAATAAT
CTTACAGGGGAGGTACCACCTAATATTGGAAAAAACAATTTTCCTGGGTTATTTAAGGTT
GATTTAGGTTATAATAACTTCAGTGGACCAATTCCTTCTGAACTATGTAATGGCAACAGG
CTTGGAGTCCTGGTTCTTGAAAACAACAGTTTTAATGGAAGCTTCCCAACATATATAGCA
AAATGTGAATCCCTCTATAGGGTAAAAGTCCCCAACAACAATCTGCAGGGGAGTATTCCT
GACTACATTGAAAAGAATGAGAACATCTCTTACTTGAATGTTCGGGGAAATATGCTTGCG
GGAAGGATTCCAGCAGCATTTGGTTATTGGACCAATCTTTCAACGATTGATCTTTCAGAG
AATATGTTTTCTGGTTCCATACCTGCCCAAATTGGGAAGCTGCAAAATCTTGTAAGACTG
AACATTTCTTCAAACAGACTGACAGGAAAAATTCCTCTTCAGTTAAGTTACTCTGCGAAA
CTGGAAGAGTTGGATCTCAGCAACAACAATCTTTCGGGAAGAATTCCGAAAGAAATTGCA
TCATCTTTAGTACTGACAAATCTTCTACTCCAGGACAACAAACTTTCTGGTACTCTTCCA
GACACTTTCTCCTCCTCACAAAAGCTTGTAAAGTTGCAGCTCGGGGACAACTTGCTTGAA
GGCTCAATTCCATGCAGTCTGAGTAAACTTAGGGAACCTAATGTTGCACTGAATCTGAGC
ATGAATAAGTTTAGTGGTCAAATTCCTAAGTGTCTGAGCAATCTAGACAATTTAGAAATC
CTTGATATATCAAGCAACAACTTGTCTGGAGCAATACCATCAGAAATGGACAAGATGAGG
TCCCTTTCGTTTCTCAACATATCATTTAATAACTTTTCAGGGAAGGTACCCATTTCATGG
GGAAAACTATTAAGTTCACATCCAGGAACTTCCCAGGGAAATCCAGGACTCTGCTTATCA
GACACTGAAAGTAGCAGCTGCAAGCATGTGAAAAAATCACAAAGAAACTGGAAGACCTTG
GCTGGTGTAATTAGTGGATGTGTGTTTTCCGTGGCAGTCATAGCTGCGGCAATATACTTG
CTAGTGACTCGGATTCAGCACCCTTCCCTGCTGAATAAGCATCGGCTCGTCAAGTATCAT
GCAAAAATTGAAGATCTGCCAGATCGTATAAATTTTGAGGACATTGTACGTGCAACAGAA
GGCTGGAGCGAAAAATATGTAATTGGAAGAGGCAAGCATGGAACTGTTTATAAGATGGAA
TCTGCGAAATCCAAAAAGCTTTGGGCTGTCAAGAAGGTTGACTTAGCTCAGAGAGCATTC
AGCGATGAAATGAGAAGCCTAAATTCTGTCAGACACCGCAATTTGGTAAGATTGGGAGGA
CACTGCACCAGACATGGATATGGCTTCATTCTAACAGAGTTTATCCCTGGAGGAACTCTT
CATGATGTCCTTCACCAGAGAAAACCACCTGTAGTCCTGGACTGGGAGCCCCGCCATCGT
ATTGCTCTTGGTGTTGCTCAAGGTCTGTCTTACCTTCATCATGATTCTGTCCCTCAAATC
ATTCACAGAGATCTCAAATCAGATAATGTAATGCTGGATACTGAGATGGAGCCAAAGATT
GGAGACTTCGGGATTGCTAAAACAGTATCAGACTCTGATGAAAACTCGACAAACTCCAAA
ATTGTTGGGACACTAGGATACATTGCTCCAGAGAATGCGTACTCAGTTCAATTGACAGAG
AAAAGTGATGTCTATAGCTATGGAGTTCTTCTACTGGAGCTCTTCTGCAGAAAAATGCCA
GTAGACCCCAGCTTTGAAAAAGGATTAGACATTGTTTCCTGGGTGAGGAAAAACTTGCAC
AGAAGCGACAACAATTTCCTTCACTTGCTTGATGAAGAAATTAGTTTTTGGTACATAGAA
GAACAATGGAAGGCCCTGAAAATGGTGTATCTAGCGCTTCAATGTGCTGAACTCGAGGCA
AGCACCAGGCCTGCAATGAGGGATGTAGTAAGGTCTCTTGTCGAGTTAAATCATAGATGT
AAAAGTGAAGAAATGAAACTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005799
PEP Infomation

pacid=37463568 transcript=PGSC0003DMT400008335 locus=PGSC0003DMG400003210 ID=PGSC0003DMT400008335.v4.03 annot-version=v4.03
Sequence

MFLFLVNCLFFFANLFAVFSTSSPQDSVHLLGFHSSLPELSQQLLPWNQSVSHCRWKGVT
CYSDITSHVKSLILTDLLLPGTLDKAFPNLCRLPRLVSLDLSGNHFTGGIPDMLANCSQL
DTILLNENRFSGSIPPEIFKSSKLIKLDLGLNQLTGTIPSEVSLSTNLQHLGLWNNFLSG
NIPKELFDLPNLTHLHLYTNELTGPLPDFPFSCSLSEFFIYENRFSGSLPITLGNCHNLT
SFSASSAHLGGVISPEVFRDLSNLEFLYLDENNFEGGIPETLWDGSLQELALSLNKFNGS
ISEKIGGSLQINYIDLSVNKLTGQLPRSVGRLKNLNKLFLYDNMLSGSLPAELGNCTSLV
AISLATNFIGGEIPQELCNLHSLIKFQVYGNQIQGQIPECIGRISGLEELDLSENRLIGK
IPPGITNMTKLVLLSLAHNNLTGEVPPNIGKNNFPGLFKVDLGYNNFSGPIPSELCNGNR
LGVLVLENNSFNGSFPTYIAKCESLYRVKVPNNNLQGSIPDYIEKNENISYLNVRGNMLA
GRIPAAFGYWTNLSTIDLSENMFSGSIPAQIGKLQNLVRLNISSNRLTGKIPLQLSYSAK
LEELDLSNNNLSGRIPKEIASSLVLTNLLLQDNKLSGTLPDTFSSSQKLVKLQLGDNLLE
GSIPCSLSKLREPNVALNLSMNKFSGQIPKCLSNLDNLEILDISSNNLSGAIPSEMDKMR
SLSFLNISFNNFSGKVPISWGKLLSSHPGTSQGNPGLCLSDTESSSCKHVKKSQRNWKTL
AGVISGCVFSVAVIAAAIYLLVTRIQHPSLLNKHRLVKYHAKIEDLPDRINFEDIVRATE
GWSEKYVIGRGKHGTVYKMESAKSKKLWAVKKVDLAQRAFSDEMRSLNSVRHRNLVRLGG
HCTRHGYGFILTEFIPGGTLHDVLHQRKPPVVLDWEPRHRIALGVAQGLSYLHHDSVPQI
IHRDLKSDNVMLDTEMEPKIGDFGIAKTVSDSDENSTNSKIVGTLGYIAPENAYSVQLTE
KSDVYSYGVLLLELFCRKMPVDPSFEKGLDIVSWVRKNLHRSDNNFLHLLDEEISFWYIE
EQWKALKMVYLALQCAELEASTRPAMRDVVRSLVELNHRCKSEEMKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400008335
Transcript Infomation

pacid=37463568 locus=PGSC0003DMG400003210 ID=PGSC0003DMT400008335.v4.03 annot-version=v4.03
Sequence

ATGTTCTTGTTTCTGGTTAATTGCCTTTTCTTCTTTGCCAATTTATTTGCAGTCTTTTCG
ACCTCATCGCCTCAAGATTCTGTTCATCTACTTGGGTTTCACAGCAGTCTTCCAGAGCTC
TCTCAACAATTGCTCCCTTGGAATCAGTCTGTCTCACACTGCCGATGGAAAGGTGTTACC
TGCTATTCAGACATAACTTCTCATGTCAAATCATTGATTCTAACAGACTTATTGCTACCT
GGAACCTTGGACAAGGCCTTTCCTAATCTCTGCCGTCTTCCTCGCTTGGTTTCTCTTGAT
CTCAGTGGCAACCATTTCACTGGTGGCATCCCTGATATGCTTGCTAACTGCAGCCAACTT
GACACGATTCTACTCAATGAAAACAGATTTTCAGGATCCATCCCACCAGAGATTTTCAAA
TCAAGCAAACTCATAAAACTTGATTTGGGTTTAAACCAGCTCACTGGCACTATTCCCTCT
GAGGTAAGCCTTTCTACAAACCTTCAACATCTCGGGCTGTGGAACAATTTCCTTAGTGGA
AATATTCCAAAAGAGCTATTTGATTTGCCAAACTTGACACATCTCCACCTCTACACAAAC
GAGCTGACAGGACCTCTACCCGACTTCCCATTCTCGTGCTCCCTTTCCGAGTTCTTTATT
TATGAGAACCGGTTCTCAGGTTCTTTGCCAATTACCCTAGGCAATTGTCACAACCTTACT
TCATTCTCTGCATCATCTGCTCATCTTGGAGGAGTTATTTCACCAGAGGTTTTTAGGGAC
CTTTCAAATCTTGAATTTCTCTATTTGGATGAGAACAACTTTGAAGGGGGAATTCCTGAG
ACCTTATGGGATGGGAGCTTACAAGAGTTAGCTCTTTCCTTGAATAAATTTAATGGTAGT
ATATCCGAAAAGATTGGTGGTTCTCTTCAGATAAATTACATTGATTTGTCAGTTAACAAA
TTAACTGGTCAGCTTCCAAGATCAGTTGGACGTCTGAAGAATCTGAACAAGCTTTTTCTG
TATGATAACATGCTTAGTGGTTCATTACCAGCAGAACTTGGGAACTGCACTTCTCTTGTT
GCGATAAGTCTCGCCACTAACTTCATCGGTGGGGAAATTCCTCAAGAGCTCTGCAACCTT
CACTCCCTAATAAAATTTCAAGTGTACGGAAATCAAATTCAGGGCCAAATTCCAGAATGC
ATTGGCAGAATAAGTGGACTGGAGGAGCTGGATCTTAGTGAGAACCGATTGATCGGCAAG
ATACCACCTGGAATCACAAATATGACGAAACTTGTGTTACTCTCTTTGGCTCATAATAAT
CTTACAGGGGAGGTACCACCTAATATTGGAAAAAACAATTTTCCTGGGTTATTTAAGGTT
GATTTAGGTTATAATAACTTCAGTGGACCAATTCCTTCTGAACTATGTAATGGCAACAGG
CTTGGAGTCCTGGTTCTTGAAAACAACAGTTTTAATGGAAGCTTCCCAACATATATAGCA
AAATGTGAATCCCTCTATAGGGTAAAAGTCCCCAACAACAATCTGCAGGGGAGTATTCCT
GACTACATTGAAAAGAATGAGAACATCTCTTACTTGAATGTTCGGGGAAATATGCTTGCG
GGAAGGATTCCAGCAGCATTTGGTTATTGGACCAATCTTTCAACGATTGATCTTTCAGAG
AATATGTTTTCTGGTTCCATACCTGCCCAAATTGGGAAGCTGCAAAATCTTGTAAGACTG
AACATTTCTTCAAACAGACTGACAGGAAAAATTCCTCTTCAGTTAAGTTACTCTGCGAAA
CTGGAAGAGTTGGATCTCAGCAACAACAATCTTTCGGGAAGAATTCCGAAAGAAATTGCA
TCATCTTTAGTACTGACAAATCTTCTACTCCAGGACAACAAACTTTCTGGTACTCTTCCA
GACACTTTCTCCTCCTCACAAAAGCTTGTAAAGTTGCAGCTCGGGGACAACTTGCTTGAA
GGCTCAATTCCATGCAGTCTGAGTAAACTTAGGGAACCTAATGTTGCACTGAATCTGAGC
ATGAATAAGTTTAGTGGTCAAATTCCTAAGTGTCTGAGCAATCTAGACAATTTAGAAATC
CTTGATATATCAAGCAACAACTTGTCTGGAGCAATACCATCAGAAATGGACAAGATGAGG
TCCCTTTCGTTTCTCAACATATCATTTAATAACTTTTCAGGGAAGGTACCCATTTCATGG
GGAAAACTATTAAGTTCACATCCAGGAACTTCCCAGGGAAATCCAGGACTCTGCTTATCA
GACACTGAAAGTAGCAGCTGCAAGCATGTGAAAAAATCACAAAGAAACTGGAAGACCTTG
GCTGGTGTAATTAGTGGATGTGTGTTTTCCGTGGCAGTCATAGCTGCGGCAATATACTTG
CTAGTGACTCGGATTCAGCACCCTTCCCTGCTGAATAAGCATCGGCTCGTCAAGTATCAT
GCAAAAATTGAAGATCTGCCAGATCGTATAAATTTTGAGGACATTGTACGTGCAACAGAA
GGCTGGAGCGAAAAATATGTAATTGGAAGAGGCAAGCATGGAACTGTTTATAAGATGGAA
TCTGCGAAATCCAAAAAGCTTTGGGCTGTCAAGAAGGTTGACTTAGCTCAGAGAGCATTC
AGCGATGAAATGAGAAGCCTAAATTCTGTCAGACACCGCAATTTGGTAAGATTGGGAGGA
CACTGCACCAGACATGGATATGGCTTCATTCTAACAGAGTTTATCCCTGGAGGAACTCTT
CATGATGTCCTTCACCAGAGAAAACCACCTGTAGTCCTGGACTGGGAGCCCCGCCATCGT
ATTGCTCTTGGTGTTGCTCAAGGTCTGTCTTACCTTCATCATGATTCTGTCCCTCAAATC
ATTCACAGAGATCTCAAATCAGATAATGTAATGCTGGATACTGAGATGGAGCCAAAGATT
GGAGACTTCGGGATTGCTAAAACAGTATCAGACTCTGATGAAAACTCGACAAACTCCAAA
ATTGTTGGGACACTAGGATACATTGCTCCAGAGAATGCGTACTCAGTTCAATTGACAGAG
AAAAGTGATGTCTATAGCTATGGAGTTCTTCTACTGGAGCTCTTCTGCAGAAAAATGCCA
GTAGACCCCAGCTTTGAAAAAGGATTAGACATTGTTTCCTGGGTGAGGAAAAACTTGCAC
AGAAGCGACAACAATTTCCTTCACTTGCTTGATGAAGAAATTAGTTTTTGGTACATAGAA
GAACAATGGAAGGCCCTGAAAATGGTGTATCTAGCGCTTCAATGTGCTGAACTCGAGGCA
AGCACCAGGCCTGCAATGAGGGATGTAGTAAGGTCTCTTGTCGAGTTAAATCATAGATGT
AAAAGTGAAGAAATGAAACTTTGA