Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008293
CDS Infomation

pacid=37431354 polypeptide=PGSC0003DMP400005773 locus=PGSC0003DMG400003196 ID=PGSC0003DMT400008293.v4.03 annot-version=v4.03
Sequence

ATGACTGTGGAAGAAATTAGAGGGAATATGGGTGGTGGTGAAAGGGGAAATAATTATGAT
AATTTTCCTATTGGTATGAGAGTTCTTGCTGTTGATGATGACCCTATTTGTTTGAAGCTT
TTGGATGGTTTGCTCAGAAAATGCCAGTATCAGGTAACTACAACAAGTCAGGCAAGGATG
GCATTGAAGATGTTGAGGGAGAATAGAGATAGATTTGATTTGGTCATCAGTGATGTTCAC
ATGCCTGATATGGATGGCTTTAAACTTCTTGAACTTGTTGGTCTTGAGATGGATCTTCCA
GTCATAATGTTGTCTGCAAACAGCGATACCAAACTTGTAAGGAAGGGAATTGATCATGGT
GCTTGCGACTATCTGGTGAAACCTGTTCGAATTGAGGAGTTGAGGAACATATGGCAACAT
GTGATCAGAAAAAAGAAGGTTGAGCCTAAGAGCCAGAGTAAGTCTAATGATCAAGACAAA
TCTTATCAGGTAAGTGGAGAAAGTGGTCGAGGGCAATCACCAACAGGTAATGTAGATCAA
AACGGAAAATGTAATAAGAAAAGGAAGGATGAAGAAGATGAGAATGATGAAAATGGAAAT
GACGATGAAGATCCAACAACTCAGAAGAGAGCTCGTGTCGTTTGGTCCATAGAACTTCAC
AGGAAGTTTGTTGCAGCTGTTGGTCAGTTGGGTATCGAAAAAGCTGTCCCAAAGAGGATT
CTTGACCTGATGAATGTTGACGGGCTTACAAGGGAAAATGTGGCAAGCCATCTGCAGAAG
TATAGGCTTTACTTGAAAAGGATCAATTCAGTTCAAACCCAACAAGCAAACATGGTTGCC
GCATTAGGGGGAAGGGACTATGTGCGAATGGGCTCACTGGATGGGCTTGGAGATTTTCGA
ACATTGGGTGGATCAGGACGGTATACTCATGCTGCCTTATCATCGTACAGTTCAGGGGGC
ATGCTTGGCAGACTAAATAGTGCTGCTGGTCTGAGCGTGCGCAACCTGGCAGCATCTCAG
CTACTCCAACCTAGTCATGGTCAAAATTTGAGCAATTCCGTTAATGCTTTCACAAAACTG
AATCCAAACATTCCGCCTGCCAGCCAGAATGCTAGTTTATTTCAAGGCATTCCTGCATCA
TTGGAGCTTGATCAATTGCAGCAGAGTAAGTCCTCGGCGCATATTCCTTTGGACGAGTCG
AGACTGCTTACAGCTGAAGTGCTCGGTTGCTCAAATAACTCCTTATCCAATGTTCCAAAT
ATTCCGATGTTGCTTCAAGGGAATCCCCAGCAACCACTTACTGGGGGAGGATTTGGAAAT
CAGCACTCTCAAAACATGACTCCGTTTAGCTCAGACTCGTTCAATACTGGTGTTAATGGA
TCTTCCAACTTTCTGGAACATGGTAGATGTAATGAGAACTGGCAAAATTCCATTCAGTTA
TCGAAGTTCCAGTCTAATTCTTTCCCATTGACTGAATCCTTCATTAACAGCCATTTGCCA
CAAAATAGTGTAAGGGAAGCCACGACTCATTTACAGAACAGCCCTCTTGATTTTACTTCC
ACCACCTCAGTTTCTCCTCCTTTTGAAGATTCAAGGGGAGAAATCCAATACCGTCAAAGT
ATGGCAGGTGCTGTTCAGAGTATGAATCAAACACCATCTCAAGCATGGGCCGATAATAAA
CAACATTATTCCCACAACTCAAATAATACTTTTGGCAACAACTTAAGGTCTCAGGTTCCC
AATGATGGTAACATGGCTTCTTTAAGCCACAGTATGAATCAAAGCAATGAGAACTTTGGC
AGAAGGATGGACATGTCATTGATTGGTAGATCGAGTGGAGGTTCTTCGACACTCGTGCAG
CAAACCGAGCATGAAAAGTTGACCCTAGATTCAAGGACAAGGTCAAATGAAGACTACCTC
TTGGAGCCAACAAAGCAACAAGTTGGTTTTAGTCCACAAGGCTATGACTCCCTGGATGAT
CTAATGACTGCAATGAAACGGGAGCAAGATGGAGGCATGTTAGATGAAGGAACAATATGG
ATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400005773
PEP Infomation

pacid=37431354 transcript=PGSC0003DMT400008293 locus=PGSC0003DMG400003196 ID=PGSC0003DMT400008293.v4.03 annot-version=v4.03
Sequence

MTVEEIRGNMGGGERGNNYDNFPIGMRVLAVDDDPICLKLLDGLLRKCQYQVTTTSQARM
ALKMLRENRDRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANSDTKLVRKGIDHG
ACDYLVKPVRIEELRNIWQHVIRKKKVEPKSQSKSNDQDKSYQVSGESGRGQSPTGNVDQ
NGKCNKKRKDEEDENDENGNDDEDPTTQKRARVVWSIELHRKFVAAVGQLGIEKAVPKRI
LDLMNVDGLTRENVASHLQKYRLYLKRINSVQTQQANMVAALGGRDYVRMGSLDGLGDFR
TLGGSGRYTHAALSSYSSGGMLGRLNSAAGLSVRNLAASQLLQPSHGQNLSNSVNAFTKL
NPNIPPASQNASLFQGIPASLELDQLQQSKSSAHIPLDESRLLTAEVLGCSNNSLSNVPN
IPMLLQGNPQQPLTGGGFGNQHSQNMTPFSSDSFNTGVNGSSNFLEHGRCNENWQNSIQL
SKFQSNSFPLTESFINSHLPQNSVREATTHLQNSPLDFTSTTSVSPPFEDSRGEIQYRQS
MAGAVQSMNQTPSQAWADNKQHYSHNSNNTFGNNLRSQVPNDGNMASLSHSMNQSNENFG
RRMDMSLIGRSSGGSSTLVQQTEHEKLTLDSRTRSNEDYLLEPTKQQVGFSPQGYDSLDD
LMTAMKREQDGGMLDEGTIWI*

Transcript Sequence

Transcript ID

PGSC0003DMT400008293
Transcript Infomation

pacid=37431354 locus=PGSC0003DMG400003196 ID=PGSC0003DMT400008293.v4.03 annot-version=v4.03
Sequence

ATGACTGTGGAAGAAATTAGAGGGAATATGGGTGGTGGTGAAAGGGGAAATAATTATGAT
AATTTTCCTATTGGTATGAGAGTTCTTGCTGTTGATGATGACCCTATTTGTTTGAAGCTT
TTGGATGGTTTGCTCAGAAAATGCCAGTATCAGGTAACTACAACAAGTCAGGCAAGGATG
GCATTGAAGATGTTGAGGGAGAATAGAGATAGATTTGATTTGGTCATCAGTGATGTTCAC
ATGCCTGATATGGATGGCTTTAAACTTCTTGAACTTGTTGGTCTTGAGATGGATCTTCCA
GTCATAATGTTGTCTGCAAACAGCGATACCAAACTTGTAAGGAAGGGAATTGATCATGGT
GCTTGCGACTATCTGGTGAAACCTGTTCGAATTGAGGAGTTGAGGAACATATGGCAACAT
GTGATCAGAAAAAAGAAGGTTGAGCCTAAGAGCCAGAGTAAGTCTAATGATCAAGACAAA
TCTTATCAGGTAAGTGGAGAAAGTGGTCGAGGGCAATCACCAACAGGTAATGTAGATCAA
AACGGAAAATGTAATAAGAAAAGGAAGGATGAAGAAGATGAGAATGATGAAAATGGAAAT
GACGATGAAGATCCAACAACTCAGAAGAGAGCTCGTGTCGTTTGGTCCATAGAACTTCAC
AGGAAGTTTGTTGCAGCTGTTGGTCAGTTGGGTATCGAAAAAGCTGTCCCAAAGAGGATT
CTTGACCTGATGAATGTTGACGGGCTTACAAGGGAAAATGTGGCAAGCCATCTGCAGAAG
TATAGGCTTTACTTGAAAAGGATCAATTCAGTTCAAACCCAACAAGCAAACATGGTTGCC
GCATTAGGGGGAAGGGACTATGTGCGAATGGGCTCACTGGATGGGCTTGGAGATTTTCGA
ACATTGGGTGGATCAGGACGGTATACTCATGCTGCCTTATCATCGTACAGTTCAGGGGGC
ATGCTTGGCAGACTAAATAGTGCTGCTGGTCTGAGCGTGCGCAACCTGGCAGCATCTCAG
CTACTCCAACCTAGTCATGGTCAAAATTTGAGCAATTCCGTTAATGCTTTCACAAAACTG
AATCCAAACATTCCGCCTGCCAGCCAGAATGCTAGTTTATTTCAAGGCATTCCTGCATCA
TTGGAGCTTGATCAATTGCAGCAGAGTAAGTCCTCGGCGCATATTCCTTTGGACGAGTCG
AGACTGCTTACAGCTGAAGTGCTCGGTTGCTCAAATAACTCCTTATCCAATGTTCCAAAT
ATTCCGATGTTGCTTCAAGGGAATCCCCAGCAACCACTTACTGGGGGAGGATTTGGAAAT
CAGCACTCTCAAAACATGACTCCGTTTAGCTCAGACTCGTTCAATACTGGTGTTAATGGA
TCTTCCAACTTTCTGGAACATGGTAGATGTAATGAGAACTGGCAAAATTCCATTCAGTTA
TCGAAGTTCCAGTCTAATTCTTTCCCATTGACTGAATCCTTCATTAACAGCCATTTGCCA
CAAAATAGTGTAAGGGAAGCCACGACTCATTTACAGAACAGCCCTCTTGATTTTACTTCC
ACCACCTCAGTTTCTCCTCCTTTTGAAGATTCAAGGGGAGAAATCCAATACCGTCAAAGT
ATGGCAGGTGCTGTTCAGAGTATGAATCAAACACCATCTCAAGCATGGGCCGATAATAAA
CAACATTATTCCCACAACTCAAATAATACTTTTGGCAACAACTTAAGGTCTCAGGTTCCC
AATGATGGTAACATGGCTTCTTTAAGCCACAGTATGAATCAAAGCAATGAGAACTTTGGC
AGAAGGATGGACATGTCATTGATTGGTAGATCGAGTGGAGGTTCTTCGACACTCGTGCAG
CAAACCGAGCATGAAAAGTTGACCCTAGATTCAAGGACAAGGTCAAATGAAGACTACCTC
TTGGAGCCAACAAAGCAACAAGTTGGTTTTAGTCCACAAGGCTATGACTCCCTGGATGAT
CTAATGACTGCAATGAAACGGGAGCAAGATGGAGGCATGTTAGATGAAGGAACAATATGG
ATTTAA