Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008244
CDS Infomation

pacid=37434427 polypeptide=PGSC0003DMP400005747 locus=PGSC0003DMG400003180 ID=PGSC0003DMT400008244.v4.03 annot-version=v4.03
Sequence

ATGGAACCCCAAATCCGCAATTTCCCAGTTTTCATACAATCACCAGAACTTCAGATCCCC
ACCCATGTCCTAAATCTCGAAAACCCTAATCCTAATTTCACTTTGCAAGACCTCAAATCA
TGTTTTTTTGATAAAACCCAGAAATCATTAGCTGCAATTAAGGATTCTGTCTATTTTACC
TTTGATGGTCGACCCATTAAGGATTCAACTCTATTGTGTGGTTCTGGGATTAGCCCGTTT
TCCACTTTGGTACTACGTTTTCGCCTTCGCGGTGGTGGTGGTGATGGAGGTGCCACGGGA
GCGGAGTCGCGAGACTGTTATCTTAAGATGTATGCTGTTAAGAAGCCGGATAAAATTGAC
CCAAATGAGATTAGGTTGTCTAGATGGTTGAATTGTGCTTTGTCGAACGAGTCTTTAAAG
CATCCGGTTGTTATCGATAAACTTGGGAATTTGTTCAATAAGGAGGCTTTGGTTGAGGCT
TTATTGAAGAAAAGGGTGCCTAAGCAGTTTGGTTATATAAAGGGGTTGAAAGATATGATT
CCGGTTGAGCTGTCAGTGATTCCGGGGAAAGAGGATAGAGGGCTTGGTGATGGTGAAGGG
ACTGGGTTTCAGTGCCCGGTAACGGGGTTGGAGTTCAATGGGAAGTACAAGTTCTTTGCT
TTGAGGGGTTGTGGACATGTTTTGAGTGCAAAAGCTTTGAAGGAAGTGAAATCCTCAGCT
TGTTTGGTTTGCCACAAGGAGATTGTGGAGAGTGACAAAATTGTGATTAACGGGAGTGAA
GAAGAGGTTGCGGCTTTGAGGGAGATAATGGAGGAAGAAAGGGTGAAATTGAAGGATAGT
AAGAAGGTGAAGAAGGGGAGGAATGAGGATGTAGCTGTGAATGGTGAAGAGGTCATTGGG
GCACCACGCTTGAGCGGGATGAAACATGGGATTGAGGATAAGCTAGTAGGCAAGGATGCG
AGGAAAGTGGAAGGGAATGGTAAAATTAGCATTAAAAGTAAGATTGAAGTTAAGGATGTG
AAGAATAGTGCGAGCAACGGGTCAGGGAAGAGGTTTAAGGCTGTTGATGTAGCTCCAGCT
CATGCTACAAAGGAAGTGTATGCCTCCATTTTCACTTCATCAAGAAAGTCCGACTTCAAG
GAGACTTACTCTTGCAGATCTTTGCCCCTTGGAAGAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005747
PEP Infomation

pacid=37434427 transcript=PGSC0003DMT400008244 locus=PGSC0003DMG400003180 ID=PGSC0003DMT400008244.v4.03 annot-version=v4.03
Sequence

MEPQIRNFPVFIQSPELQIPTHVLNLENPNPNFTLQDLKSCFFDKTQKSLAAIKDSVYFT
FDGRPIKDSTLLCGSGISPFSTLVLRFRLRGGGGDGGATGAESRDCYLKMYAVKKPDKID
PNEIRLSRWLNCALSNESLKHPVVIDKLGNLFNKEALVEALLKKRVPKQFGYIKGLKDMI
PVELSVIPGKEDRGLGDGEGTGFQCPVTGLEFNGKYKFFALRGCGHVLSAKALKEVKSSA
CLVCHKEIVESDKIVINGSEEEVAALREIMEEERVKLKDSKKVKKGRNEDVAVNGEEVIG
APRLSGMKHGIEDKLVGKDARKVEGNGKISIKSKIEVKDVKNSASNGSGKRFKAVDVAPA
HATKEVYASIFTSSRKSDFKETYSCRSLPLGRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400008244
Transcript Infomation

pacid=37434427 locus=PGSC0003DMG400003180 ID=PGSC0003DMT400008244.v4.03 annot-version=v4.03
Sequence

ATGGAACCCCAAATCCGCAATTTCCCAGTTTTCATACAATCACCAGAACTTCAGATCCCC
ACCCATGTCCTAAATCTCGAAAACCCTAATCCTAATTTCACTTTGCAAGACCTCAAATCA
TGTTTTTTTGATAAAACCCAGAAATCATTAGCTGCAATTAAGGATTCTGTCTATTTTACC
TTTGATGGTCGACCCATTAAGGATTCAACTCTATTGTGTGGTTCTGGGATTAGCCCGTTT
TCCACTTTGGTACTACGTTTTCGCCTTCGCGGTGGTGGTGGTGATGGAGGTGCCACGGGA
GCGGAGTCGCGAGACTGTTATCTTAAGATGTATGCTGTTAAGAAGCCGGATAAAATTGAC
CCAAATGAGATTAGGTTGTCTAGATGGTTGAATTGTGCTTTGTCGAACGAGTCTTTAAAG
CATCCGGTTGTTATCGATAAACTTGGGAATTTGTTCAATAAGGAGGCTTTGGTTGAGGCT
TTATTGAAGAAAAGGGTGCCTAAGCAGTTTGGTTATATAAAGGGGTTGAAAGATATGATT
CCGGTTGAGCTGTCAGTGATTCCGGGGAAAGAGGATAGAGGGCTTGGTGATGGTGAAGGG
ACTGGGTTTCAGTGCCCGGTAACGGGGTTGGAGTTCAATGGGAAGTACAAGTTCTTTGCT
TTGAGGGGTTGTGGACATGTTTTGAGTGCAAAAGCTTTGAAGGAAGTGAAATCCTCAGCT
TGTTTGGTTTGCCACAAGGAGATTGTGGAGAGTGACAAAATTGTGATTAACGGGAGTGAA
GAAGAGGTTGCGGCTTTGAGGGAGATAATGGAGGAAGAAAGGGTGAAATTGAAGGATAGT
AAGAAGGTGAAGAAGGGGAGGAATGAGGATGTAGCTGTGAATGGTGAAGAGGTCATTGGG
GCACCACGCTTGAGCGGGATGAAACATGGGATTGAGGATAAGCTAGTAGGCAAGGATGCG
AGGAAAGTGGAAGGGAATGGTAAAATTAGCATTAAAAGTAAGATTGAAGTTAAGGATGTG
AAGAATAGTGCGAGCAACGGGTCAGGGAAGAGGTTTAAGGCTGTTGATGTAGCTCCAGCT
CATGCTACAAAGGAAGTGTATGCCTCCATTTTCACTTCATCAAGAAAGTCCGACTTCAAG
GAGACTTACTCTTGCAGATCTTTGCCCCTTGGAAGAAACTGA