Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008203
CDS Infomation

pacid=37462744 polypeptide=PGSC0003DMP400005717 locus=PGSC0003DMG400003162 ID=PGSC0003DMT400008203.v4.03 annot-version=v4.03
Sequence

ATGGTGGTGGAGCTGTTTTGTTTCCTCGCTGTTGTTGTAGTACTTAAGTACTTCTTCTAC
GATGACGATGTAATCGATGTTGGATCCTCCGATTTCAATGCTCTATTTAATGTTGCCGAA
AGGCTTGAGAAGCTTTATGATGGTAAGGCTCATGTTGGGCTTCAAATTCCTGACCAGGAC
TCTGGTTCTCGACAGAGTATTGATGTAGTTCTCGTCACTAGAAGGGAAGCAGTGATAGTT
TGTGTAAAGAATGTAGCAGGGTTTATATCTGTTGATAAGGACGGGAGATGGGTTTGTACT
GGAAGCCATAAGACGGAGCGTCTCCCCAATCCTGTAGCAGAAGCAAAACAATTAGTTCCT
ATTCTTGAATCCTACCTTGAACAAAGGGGCATCACTCTTCCGGAAGGATATTTGTCTTGC
AAAGTCATATGTTCAAACCCCAATTTCCGTACCATTGACTCAGACTCTTTTCCCTCTGAG
GTCATAACATATGACCAATGGATACAACTAAAACCCGAATCAAACATGCTTTCTGGTTGG
ATTAAAGGTGCATTTCATGGTGGGAAGAAGGACGTACAGGAATCAATACGTGAGAAGCTT
AATCTTGTACTCAGCACAGCTCCAATGTGGGACAGGTTAGAGCTCAAAGGTAATAAATTT
GTCCTTGGAGAGTTTCTCGAGTTCAAAGGGGACAACGAAGATATCCGGGCATTGGGAAAC
ATCAGGAGATCAAAAGTTAGTACAGTGACAATCCAGAAAACAAGCATGTTTGGTGTAGCT
CCTTCTAAGCTCCAAGTACACTACTGTCTTCGAGATTATCGTGGTGAAGGCGCTTCAGCT
TCTGACTGGACAGAAGTCACTGTCCATTCCAGGACTGAGATCAAAATTCAACCAAAAGGT
TCAACCAAAGTACGCAAATACAAGTTATCCTCAGTTATTTCCATGTCATTAAGTGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005717
PEP Infomation

pacid=37462744 transcript=PGSC0003DMT400008203 locus=PGSC0003DMG400003162 ID=PGSC0003DMT400008203.v4.03 annot-version=v4.03
Sequence

MVVELFCFLAVVVVLKYFFYDDDVIDVGSSDFNALFNVAERLEKLYDGKAHVGLQIPDQD
SGSRQSIDVVLVTRREAVIVCVKNVAGFISVDKDGRWVCTGSHKTERLPNPVAEAKQLVP
ILESYLEQRGITLPEGYLSCKVICSNPNFRTIDSDSFPSEVITYDQWIQLKPESNMLSGW
IKGAFHGGKKDVQESIREKLNLVLSTAPMWDRLELKGNKFVLGEFLEFKGDNEDIRALGN
IRRSKVSTVTIQKTSMFGVAPSKLQVHYCLRDYRGEGASASDWTEVTVHSRTEIKIQPKG
STKVRKYKLSSVISMSLSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400008203
Transcript Infomation

pacid=37462744 locus=PGSC0003DMG400003162 ID=PGSC0003DMT400008203.v4.03 annot-version=v4.03
Sequence

ATGGTGGTGGAGCTGTTTTGTTTCCTCGCTGTTGTTGTAGTACTTAAGTACTTCTTCTAC
GATGACGATGTAATCGATGTTGGATCCTCCGATTTCAATGCTCTATTTAATGTTGCCGAA
AGGCTTGAGAAGCTTTATGATGGTAAGGCTCATGTTGGGCTTCAAATTCCTGACCAGGAC
TCTGGTTCTCGACAGAGTATTGATGTAGTTCTCGTCACTAGAAGGGAAGCAGTGATAGTT
TGTGTAAAGAATGTAGCAGGGTTTATATCTGTTGATAAGGACGGGAGATGGGTTTGTACT
GGAAGCCATAAGACGGAGCGTCTCCCCAATCCTGTAGCAGAAGCAAAACAATTAGTTCCT
ATTCTTGAATCCTACCTTGAACAAAGGGGCATCACTCTTCCGGAAGGATATTTGTCTTGC
AAAGTCATATGTTCAAACCCCAATTTCCGTACCATTGACTCAGACTCTTTTCCCTCTGAG
GTCATAACATATGACCAATGGATACAACTAAAACCCGAATCAAACATGCTTTCTGGTTGG
ATTAAAGGTGCATTTCATGGTGGGAAGAAGGACGTACAGGAATCAATACGTGAGAAGCTT
AATCTTGTACTCAGCACAGCTCCAATGTGGGACAGGTTAGAGCTCAAAGGTAATAAATTT
GTCCTTGGAGAGTTTCTCGAGTTCAAAGGGGACAACGAAGATATCCGGGCATTGGGAAAC
ATCAGGAGATCAAAAGTTAGTACAGTGACAATCCAGAAAACAAGCATGTTTGGTGTAGCT
CCTTCTAAGCTCCAAGTACACTACTGTCTTCGAGATTATCGTGGTGAAGGCGCTTCAGCT
TCTGACTGGACAGAAGTCACTGTCCATTCCAGGACTGAGATCAAAATTCAACCAAAAGGT
TCAACCAAAGTACGCAAATACAAGTTATCCTCAGTTATTTCCATGTCATTAAGTGCCTGA