Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008202
CDS Infomation

pacid=37463901 polypeptide=PGSC0003DMP400005716 locus=PGSC0003DMG400003161 ID=PGSC0003DMT400008202.v4.03 annot-version=v4.03
Sequence

ATGTCTGAATCACTAGCAGGAAAGAGGTTTCTTATCGGTTACGCTCTTTCATCTCAAAAG
ATCAACACCTTTATGAAAGATTCTCTGGTCATTCATGCCCGAGATCGAGGCGTTGATCTC
ATCCCCATCGATCTCGACAAGCCATTGATCGAACAAGGTCCCTTCGACTGCGTCATTCAC
AAGCTATATGACACAGAGTGGAGGAAACAGCTCGAAGAATTCTCCCTCCAGAGCCCTACT
ACACTCATAATTGACCCTGTAAATGCCGTCGAGAAGCTCCAGAATCGAGTCTCTATGCTC
GAATTCGTCAACGAATTGAAAATCGAGCATCTCGAAACTCCTTTACAGGTTTTCGTTTCG
GACGATTCATCGGAATCTCTGCAGGACGCTATGACTCGTGAGGGCTTGAAGTTTCCCCTA
ATTGCCAAGCCGTTGATAGCAGATGGCGCTGCGAATTCACACCAATTGTCTTTAATCCTA
AACCAAAAAGGATTAACAAAATTAAACCCTCCAATTGTACTACAGGAATTCGTGAACCAC
GGTGGAGTCATTTTCAAAGTTTATGTAGCAGGAGATCACGTGAAATGCGTGAAAAGGAAG
TCACTAACCGATATCTCTGAAGAAAAACTGAACACTAGCACCTCAGAGAATTACCAGGTA
TCAAATTTTTCTGCTCAAAATCAGAGCGATCACGAGAATTTTGCAGAGCTCATCAAGGCG
GCAGAAATGCCGCCTTTGAGCTTTGTAAACGAAGTGGCTAATCGGATGAGGGATGCTCTG
AAGCTGCATCTATTTAACTTTGATATGCTAAGGGACAGTAGAATTGGAACTCGATATCTT
GTAATTGATGTCAATTACTTCCCTGGTTATGCTAAGATGCCCCAATTCGAGACTGTGCTG
ACTGATTTCTTCATTGATATTGCACACCAGAAGCGAAACAGAGAGAGTGGTGACTCGGAC
CAGATGGAGAATAAGACCAAGGATGCAGATTCGAATAGAAACAATCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400005716
PEP Infomation

pacid=37463901 transcript=PGSC0003DMT400008202 locus=PGSC0003DMG400003161 ID=PGSC0003DMT400008202.v4.03 annot-version=v4.03
Sequence

MSESLAGKRFLIGYALSSQKINTFMKDSLVIHARDRGVDLIPIDLDKPLIEQGPFDCVIH
KLYDTEWRKQLEEFSLQSPTTLIIDPVNAVEKLQNRVSMLEFVNELKIEHLETPLQVFVS
DDSSESLQDAMTREGLKFPLIAKPLIADGAANSHQLSLILNQKGLTKLNPPIVLQEFVNH
GGVIFKVYVAGDHVKCVKRKSLTDISEEKLNTSTSENYQVSNFSAQNQSDHENFAELIKA
AEMPPLSFVNEVANRMRDALKLHLFNFDMLRDSRIGTRYLVIDVNYFPGYAKMPQFETVL
TDFFIDIAHQKRNRESGDSDQMENKTKDADSNRNNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400008202
Transcript Infomation

pacid=37463901 locus=PGSC0003DMG400003161 ID=PGSC0003DMT400008202.v4.03 annot-version=v4.03
Sequence

ATGTCTGAATCACTAGCAGGAAAGAGGTTTCTTATCGGTTACGCTCTTTCATCTCAAAAG
ATCAACACCTTTATGAAAGATTCTCTGGTCATTCATGCCCGAGATCGAGGCGTTGATCTC
ATCCCCATCGATCTCGACAAGCCATTGATCGAACAAGGTCCCTTCGACTGCGTCATTCAC
AAGCTATATGACACAGAGTGGAGGAAACAGCTCGAAGAATTCTCCCTCCAGAGCCCTACT
ACACTCATAATTGACCCTGTAAATGCCGTCGAGAAGCTCCAGAATCGAGTCTCTATGCTC
GAATTCGTCAACGAATTGAAAATCGAGCATCTCGAAACTCCTTTACAGGTTTTCGTTTCG
GACGATTCATCGGAATCTCTGCAGGACGCTATGACTCGTGAGGGCTTGAAGTTTCCCCTA
ATTGCCAAGCCGTTGATAGCAGATGGCGCTGCGAATTCACACCAATTGTCTTTAATCCTA
AACCAAAAAGGATTAACAAAATTAAACCCTCCAATTGTACTACAGGAATTCGTGAACCAC
GGTGGAGTCATTTTCAAAGTTTATGTAGCAGGAGATCACGTGAAATGCGTGAAAAGGAAG
TCACTAACCGATATCTCTGAAGAAAAACTGAACACTAGCACCTCAGAGAATTACCAGGTA
TCAAATTTTTCTGCTCAAAATCAGAGCGATCACGAGAATTTTGCAGAGCTCATCAAGGCG
GCAGAAATGCCGCCTTTGAGCTTTGTAAACGAAGTGGCTAATCGGATGAGGGATGCTCTG
AAGCTGCATCTATTTAACTTTGATATGCTAAGGGACAGTAGAATTGGAACTCGATATCTT
GTAATTGATGTCAATTACTTCCCTGGTTATGCTAAGATGCCCCAATTCGAGACTGTGCTG
ACTGATTTCTTCATTGATATTGCACACCAGAAGCGAAACAGAGAGAGTGGTGACTCGGAC
CAGATGGAGAATAAGACCAAGGATGCAGATTCGAATAGAAACAATCTATAA