Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008201
CDS Infomation

pacid=37459630 polypeptide=PGSC0003DMP400005715 locus=PGSC0003DMG400003160 ID=PGSC0003DMT400008201.v4.03 annot-version=v4.03
Sequence

ATGGAGAACAGGCAACAACAAATGATGTCGTTCCTTGCCAAGGCCATGCAGAGCCCTGGC
TTTGTAGCCCAATTAGTACATCAACAGAATGGCAATAACAGGCATATTACTGGGCTTAAT
AAGAAAAGGAGACTTCCTGAACAGTCTGAAGAAAATGTTGCGTGCAATCCTGTCAATGCT
TTGCAAGATGGACAGGTAGTCAGGTATCAACCTTCAATGACCGAGGCTGCAAAAGTGTTG
CAGCAGCAGATTCTGAAAATAAATGCATCTGGGAGGCTGGACAACCGATTAAACACAAAT
GACTGTTTGACTAATAATCCCCTCCCGCCTCAAAATTCTCTAGACAGTAGCGGTGCATCC
AGTTGTATTTCCAGTGTTACCCTCTCAGAAGTAATGTCAACTTCTTCACAGCCTAATCTA
ATGTCAGATTCAGGATTTCCATTCAACTCTTGTTCATCCATCATATCTGAGACCCAATCA
TCCACTACTGTGGTTCCTGGGGAGGCCAACATTCCCGTATTACCTGAAGCTGATGCATTG
AACTCTCAGGCAGTCCATGATTTGCCTGAATTTTCTCATATTCTTGGAGTAACTGACCTT
GACCTTAATATGTCTGAGACTGGAAATGTGCCAGATATTGACACAGCGCAAGGTATTTTG
GATGGTTTAACAACAATTGTCTCTGATGAATTTTCAGCAAACACAGATGGTGATGTTTTG
CTGGATGACATGCCTAAGCTTCCAGCGATTAATGATATTTTCTGGGACCAGATTCTCTCT
GCAACCCCTGCAAGCCCTCTCACTGGGGATACGGATGAGATTGGTTCCCTAGTCGTGGAA
GAGGATTTCCTAGGAGTTCAGGAGAGTGATTGGGATAAACTAAAGCATATGCATCATCTT
ACTGAACAGATGGGGCTACTTTCATCAGTTGCCCAGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005715
PEP Infomation

pacid=37459630 transcript=PGSC0003DMT400008201 locus=PGSC0003DMG400003160 ID=PGSC0003DMT400008201.v4.03 annot-version=v4.03
Sequence

MENRQQQMMSFLAKAMQSPGFVAQLVHQQNGNNRHITGLNKKRRLPEQSEENVACNPVNA
LQDGQVVRYQPSMTEAAKVLQQQILKINASGRLDNRLNTNDCLTNNPLPPQNSLDSSGAS
SCISSVTLSEVMSTSSQPNLMSDSGFPFNSCSSIISETQSSTTVVPGEANIPVLPEADAL
NSQAVHDLPEFSHILGVTDLDLNMSETGNVPDIDTAQGILDGLTTIVSDEFSANTDGDVL
LDDMPKLPAINDIFWDQILSATPASPLTGDTDEIGSLVVEEDFLGVQESDWDKLKHMHHL
TEQMGLLSSVAQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400008201
Transcript Infomation

pacid=37459630 locus=PGSC0003DMG400003160 ID=PGSC0003DMT400008201.v4.03 annot-version=v4.03
Sequence

ATGGAGAACAGGCAACAACAAATGATGTCGTTCCTTGCCAAGGCCATGCAGAGCCCTGGC
TTTGTAGCCCAATTAGTACATCAACAGAATGGCAATAACAGGCATATTACTGGGCTTAAT
AAGAAAAGGAGACTTCCTGAACAGTCTGAAGAAAATGTTGCGTGCAATCCTGTCAATGCT
TTGCAAGATGGACAGGTAGTCAGGTATCAACCTTCAATGACCGAGGCTGCAAAAGTGTTG
CAGCAGCAGATTCTGAAAATAAATGCATCTGGGAGGCTGGACAACCGATTAAACACAAAT
GACTGTTTGACTAATAATCCCCTCCCGCCTCAAAATTCTCTAGACAGTAGCGGTGCATCC
AGTTGTATTTCCAGTGTTACCCTCTCAGAAGTAATGTCAACTTCTTCACAGCCTAATCTA
ATGTCAGATTCAGGATTTCCATTCAACTCTTGTTCATCCATCATATCTGAGACCCAATCA
TCCACTACTGTGGTTCCTGGGGAGGCCAACATTCCCGTATTACCTGAAGCTGATGCATTG
AACTCTCAGGCAGTCCATGATTTGCCTGAATTTTCTCATATTCTTGGAGTAACTGACCTT
GACCTTAATATGTCTGAGACTGGAAATGTGCCAGATATTGACACAGCGCAAGGTATTTTG
GATGGTTTAACAACAATTGTCTCTGATGAATTTTCAGCAAACACAGATGGTGATGTTTTG
CTGGATGACATGCCTAAGCTTCCAGCGATTAATGATATTTTCTGGGACCAGATTCTCTCT
GCAACCCCTGCAAGCCCTCTCACTGGGGATACGGATGAGATTGGTTCCCTAGTCGTGGAA
GAGGATTTCCTAGGAGTTCAGGAGAGTGATTGGGATAAACTAAAGCATATGCATCATCTT
ACTGAACAGATGGGGCTACTTTCATCAGTTGCCCAGATTTGA