Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008196
CDS Infomation

pacid=37460577 polypeptide=PGSC0003DMP400005712 locus=PGSC0003DMG400003159 ID=PGSC0003DMT400008196.v4.03 annot-version=v4.03
Sequence

ATGTCGGCTAGAACAGTGAAAGTGAGCAATGTCTCTCTGGGTGCATCGGAGCAAGATATC
AAGGAGTTCTTTTCGTTCTCCGGGGATATTGAATATGTTGAGATGATGAGTGAGAATGAG
CGATCTCAAATTGCATATGTCACATTCAAGGATCCCCAGGGTGCAGAAACTGCAGTTCTT
CTTTCTGGAGCAACAATTATTGATCAGTCAGTCACAATAGTACCCGAACCTGACTACGAG
CTGCCTCCTACAGCTCTAGTGCCAATCAAGGCAACTGAGAGTGCTAATGCAGCTGGTGGT
GGATCTGCTATTCAAAAGGCAGAAGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTCATC
TTGGGCAAGGATGCAGTTAACAAAGCCAAGACATTTGATGAGAAACACCAGTTCACATCC
ACTGCCTCAGCAAAAGTTGCTTCTTTAGACCAAAAGATTGGCCTTAGTGAGAAAATTAAT
TTGGGAGCAACAATTGTGAATGACAAAGTGAAAGAAATGGACCAGAAGTTCCATGTTTCT
GAAAAGACAAAATCAGCTCTTGCAGCTGCTGAGCAGACGGTTAGCACTGCTGGATCTGCC
ATCATGAAGAACAGATATGTTTTGACAGGGGCATCTTGGGTTACTGGTGCTTTCAATAAG
GTCACCAAGGCTGCAGGGGAAGTGGGCCAGAAGACGAAGGAAAAGATGGCAGAAGAAGAA
CAGGCAAAAAATTCAGCTGAAGGTTATGTGCCTATACATGCTCTTTCAGAGTCCCCAAAA
GCCTCCAAGACCGAGGAACCTACCAAGCCATCTTCACCTAAGGGATTAATCCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400005712
PEP Infomation

pacid=37460577 transcript=PGSC0003DMT400008196 locus=PGSC0003DMG400003159 ID=PGSC0003DMT400008196.v4.03 annot-version=v4.03
Sequence

MSARTVKVSNVSLGASEQDIKEFFSFSGDIEYVEMMSENERSQIAYVTFKDPQGAETAVL
LSGATIIDQSVTIVPEPDYELPPTALVPIKATESANAAGGGSAIQKAEDVVSSMLAKGFI
LGKDAVNKAKTFDEKHQFTSTASAKVASLDQKIGLSEKINLGATIVNDKVKEMDQKFHVS
EKTKSALAAAEQTVSTAGSAIMKNRYVLTGASWVTGAFNKVTKAAGEVGQKTKEKMAEEE
QAKNSAEGYVPIHALSESPKASKTEEPTKPSSPKGLIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400008196
Transcript Infomation

pacid=37460577 locus=PGSC0003DMG400003159 ID=PGSC0003DMT400008196.v4.03 annot-version=v4.03
Sequence

ATGTCGGCTAGAACAGTGAAAGTGAGCAATGTCTCTCTGGGTGCATCGGAGCAAGATATC
AAGGAGTTCTTTTCGTTCTCCGGGGATATTGAATATGTTGAGATGATGAGTGAGAATGAG
CGATCTCAAATTGCATATGTCACATTCAAGGATCCCCAGGGTGCAGAAACTGCAGTTCTT
CTTTCTGGAGCAACAATTATTGATCAGTCAGTCACAATAGTACCCGAACCTGACTACGAG
CTGCCTCCTACAGCTCTAGTGCCAATCAAGGCAACTGAGAGTGCTAATGCAGCTGGTGGT
GGATCTGCTATTCAAAAGGCAGAAGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTCATC
TTGGGCAAGGATGCAGTTAACAAAGCCAAGACATTTGATGAGAAACACCAGTTCACATCC
ACTGCCTCAGCAAAAGTTGCTTCTTTAGACCAAAAGATTGGCCTTAGTGAGAAAATTAAT
TTGGGAGCAACAATTGTGAATGACAAAGTGAAAGAAATGGACCAGAAGTTCCATGTTTCT
GAAAAGACAAAATCAGCTCTTGCAGCTGCTGAGCAGACGGTTAGCACTGCTGGATCTGCC
ATCATGAAGAACAGATATGTTTTGACAGGGGCATCTTGGGTTACTGGTGCTTTCAATAAG
GTCACCAAGGCTGCAGGGGAAGTGGGCCAGAAGACGAAGGAAAAGATGGCAGAAGAAGAA
CAGGCAAAAAATTCAGCTGAAGGTTATGTGCCTATACATGCTCTTTCAGAGTCCCCAAAA
GCCTCCAAGACCGAGGAACCTACCAAGCCATCTTCACCTAAGGGATTAATCCTCTAG