Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008182
CDS Infomation

pacid=37462798 polypeptide=PGSC0003DMP400005703 locus=PGSC0003DMG400003155 ID=PGSC0003DMT400008182.v4.03 annot-version=v4.03
Sequence

ATGGTGAGTGTAGCTACTGTTGATGCCCAAAAAGCAGAGGTATTATCTTCTGTAATTTCT
CCGAATCAAAATCAATCTTCAGAAGAGCTACATGTATTCAGATCAAAATTACCAGATATA
TCAATTTCCAATAACATACCACTCCATGTCTACTTGTTCGAAAGGCTATCGGAGTTTGAG
GAGCGGACTTGTCTTATAGCAGGCAACAGTGGAGAAACATTCACTTTTGGTGAAACGCAT
CTCATCTGCCAGAAAATTGCTGCTGGTTTAACGAAGGTAGGGATCAAAAAGGGAGATGTT
ATCATGACTTTTCTACAGAACTGTTCGGAATTTGTGTTTACTTTTCTAGCATCTTCTATG
ATTGGAGCTGTTATCACTACGGCTAATCCGTTCTACACGAAATCGGAAGCGTTTAAGCAG
TTGAAAGCTTCGAATGCGAAATTAATAGTTACTCAATCGCAGTATGTGGATAAATTCCGT
GATCCCGCGGAAAATGATCCGAAAATTGGGGAAGATTTTTCGGTCGTTACAATTGATGAT
CCGCCGGAGAATTGCTTGCATTTCTCTGTGCTATCGGAAGCTAAAGCAGAGGATATGCCA
AAAGGAGTTGTTATCCATCCTGACGATCCCGTGGCTCTTCCGTTTTCGTCAGGGACCACG
GGGTTGCCAAAAGGAGTGATACTGACTCATAAAAGCTTGATTACAGGGGTGGCTCAATTA
GTGGATGGCGACAACCCAAATTTTTACTTGAAGCACGACGATGTGGTGCTATGTGTGCTT
CCTCTGTTTCATATATTCGCGTTGAATTCAGTGCTTTTAGTGTCGTTAAGAGCTGGAGCT
AGTGTTCTGTTGATGCAAAAATTCGAAATTAGTGCGCTGTTGGAGCTGATACAAAAACAC
CGTGTCTCAGTCGCTGCTGTAGTTCCGCCCCTGGTTCTTGCATTGGCGAAAAATCCAATG
GTGGATTCGTTCGATTTGAGCTCGATACGGCTCGTGATGTCCGGGGCTGCGCCGCTAGGG
AAGGAGCTGGAGGAAGCACTCCATAGAAGAGTGCCCCAAGCCATATTTGGACAGGGATAT
GGTATGACAGAGGCAGGACCAGTAGTAACAATGTGTCCAGCATTTGCAAAGCAACCATTA
TCAACTAAATCCGGTTCATGTGGCTCTGTGGTTCGAAATGCGGACCTCAAGGTGGTTGAC
CCGGAAAACGGTGGCTCCCTTGACCGCAACCAACCCGGTGAAATTTGCATTCGTGGTTCC
CAAATCATGAAAGGTTATCTGAATGATGATGAGGCCACTGCACGGACCATAGATGTCGAT
GGATGGCTCCACACCGGCGATATAGGATATGTAGATGACGATGATGAAATATACATTGTC
GATAGAGTCAAAGAGCTCATAAAGTTTAAAGGTTTCCAGGTGCCACCAGCTGAGCTTGAG
TCTCTTCTAATAAGCCATCCAGAAATTGCAGATGCTGCTGTTGTGCCGCAAAAGGATGGC
GCTGCAGGGGAAGTCCCGGTTGCATTTGTAGTCCGTTCGGCCCAAGGTTTTGATCTTACT
GAAGAAGCTATAAAGGAATTTATCGCCAAACAGGTGGTATTCTATAAAAAATTGCACAAG
GTGTATTTTATTCACGCGATTCCGAAGTCTCCATCTGGAAAGATACTAAGGAAAGATTTG
AGAGCCAAACTAGCCGCGACACCACAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005703
PEP Infomation

pacid=37462798 transcript=PGSC0003DMT400008182 locus=PGSC0003DMG400003155 ID=PGSC0003DMT400008182.v4.03 annot-version=v4.03
Sequence

MVSVATVDAQKAEVLSSVISPNQNQSSEELHVFRSKLPDISISNNIPLHVYLFERLSEFE
ERTCLIAGNSGETFTFGETHLICQKIAAGLTKVGIKKGDVIMTFLQNCSEFVFTFLASSM
IGAVITTANPFYTKSEAFKQLKASNAKLIVTQSQYVDKFRDPAENDPKIGEDFSVVTIDD
PPENCLHFSVLSEAKAEDMPKGVVIHPDDPVALPFSSGTTGLPKGVILTHKSLITGVAQL
VDGDNPNFYLKHDDVVLCVLPLFHIFALNSVLLVSLRAGASVLLMQKFEISALLELIQKH
RVSVAAVVPPLVLALAKNPMVDSFDLSSIRLVMSGAAPLGKELEEALHRRVPQAIFGQGY
GMTEAGPVVTMCPAFAKQPLSTKSGSCGSVVRNADLKVVDPENGGSLDRNQPGEICIRGS
QIMKGYLNDDEATARTIDVDGWLHTGDIGYVDDDDEIYIVDRVKELIKFKGFQVPPAELE
SLLISHPEIADAAVVPQKDGAAGEVPVAFVVRSAQGFDLTEEAIKEFIAKQVVFYKKLHK
VYFIHAIPKSPSGKILRKDLRAKLAATPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400008182
Transcript Infomation

pacid=37462798 locus=PGSC0003DMG400003155 ID=PGSC0003DMT400008182.v4.03 annot-version=v4.03
Sequence

ATGGTGAGTGTAGCTACTGTTGATGCCCAAAAAGCAGAGGTATTATCTTCTGTAATTTCT
CCGAATCAAAATCAATCTTCAGAAGAGCTACATGTATTCAGATCAAAATTACCAGATATA
TCAATTTCCAATAACATACCACTCCATGTCTACTTGTTCGAAAGGCTATCGGAGTTTGAG
GAGCGGACTTGTCTTATAGCAGGCAACAGTGGAGAAACATTCACTTTTGGTGAAACGCAT
CTCATCTGCCAGAAAATTGCTGCTGGTTTAACGAAGGTAGGGATCAAAAAGGGAGATGTT
ATCATGACTTTTCTACAGAACTGTTCGGAATTTGTGTTTACTTTTCTAGCATCTTCTATG
ATTGGAGCTGTTATCACTACGGCTAATCCGTTCTACACGAAATCGGAAGCGTTTAAGCAG
TTGAAAGCTTCGAATGCGAAATTAATAGTTACTCAATCGCAGTATGTGGATAAATTCCGT
GATCCCGCGGAAAATGATCCGAAAATTGGGGAAGATTTTTCGGTCGTTACAATTGATGAT
CCGCCGGAGAATTGCTTGCATTTCTCTGTGCTATCGGAAGCTAAAGCAGAGGATATGCCA
AAAGGAGTTGTTATCCATCCTGACGATCCCGTGGCTCTTCCGTTTTCGTCAGGGACCACG
GGGTTGCCAAAAGGAGTGATACTGACTCATAAAAGCTTGATTACAGGGGTGGCTCAATTA
GTGGATGGCGACAACCCAAATTTTTACTTGAAGCACGACGATGTGGTGCTATGTGTGCTT
CCTCTGTTTCATATATTCGCGTTGAATTCAGTGCTTTTAGTGTCGTTAAGAGCTGGAGCT
AGTGTTCTGTTGATGCAAAAATTCGAAATTAGTGCGCTGTTGGAGCTGATACAAAAACAC
CGTGTCTCAGTCGCTGCTGTAGTTCCGCCCCTGGTTCTTGCATTGGCGAAAAATCCAATG
GTGGATTCGTTCGATTTGAGCTCGATACGGCTCGTGATGTCCGGGGCTGCGCCGCTAGGG
AAGGAGCTGGAGGAAGCACTCCATAGAAGAGTGCCCCAAGCCATATTTGGACAGGGATAT
GGTATGACAGAGGCAGGACCAGTAGTAACAATGTGTCCAGCATTTGCAAAGCAACCATTA
TCAACTAAATCCGGTTCATGTGGCTCTGTGGTTCGAAATGCGGACCTCAAGGTGGTTGAC
CCGGAAAACGGTGGCTCCCTTGACCGCAACCAACCCGGTGAAATTTGCATTCGTGGTTCC
CAAATCATGAAAGGTTATCTGAATGATGATGAGGCCACTGCACGGACCATAGATGTCGAT
GGATGGCTCCACACCGGCGATATAGGATATGTAGATGACGATGATGAAATATACATTGTC
GATAGAGTCAAAGAGCTCATAAAGTTTAAAGGTTTCCAGGTGCCACCAGCTGAGCTTGAG
TCTCTTCTAATAAGCCATCCAGAAATTGCAGATGCTGCTGTTGTGCCGCAAAAGGATGGC
GCTGCAGGGGAAGTCCCGGTTGCATTTGTAGTCCGTTCGGCCCAAGGTTTTGATCTTACT
GAAGAAGCTATAAAGGAATTTATCGCCAAACAGGTGGTATTCTATAAAAAATTGCACAAG
GTGTATTTTATTCACGCGATTCCGAAGTCTCCATCTGGAAAGATACTAAGGAAAGATTTG
AGAGCCAAACTAGCCGCGACACCACAGTGA