Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008161
CDS Infomation

pacid=37461101 polypeptide=PGSC0003DMP400005689 locus=PGSC0003DMG400003148 ID=PGSC0003DMT400008161.v4.03 annot-version=v4.03
Sequence

ATGCTGAACCTCAAACTCTCTCACAATCCGCTCATACAATATAGGCCAATACGAACCTCT
GATTTAGAAGTACTTGAGAAAATCCATGGGGATCTGTTCCCGATCAGATATGAGTCTGAG
TTCTTCCAAAATGTTGTTAATGGACGGGACATTGTGTCATGGGGAGCTGTTGATCGTAAT
CGACCCAATGAGCAAAGTGACGAGCTTATTGGATTTGTGACTGCCCGGACTGTTCTAGCA
AAAGACAGTGACATAGAAGAATTTCTGAGGTATGACTCATCTAGATCAGAGCAAACACTG
ATTTACATCTTGACTCTGGGGGTTGCAGACTCTTATAGAAATCTTGGAATAGCCAGTTCT
CTAATTCGCGAGGTCATAAAATATGCCTCGAACATCCCGATTTGTCGAGCAGTTTACCTA
CATGTGATCTCATATAATAACCCTGCCATATACTTGTACAAGAAAATGTCCTTTCAGTGT
GTGAGGAGGCTGTCTGCCTTTTATTTTATTAATGGTCAGCATTACGATGCGTACTTGTTC
ATCTACTATGTGAATGGTGGTCGCTCTCCTTGCTCACCCTTTTTTCAGCTTGAGGATTTG
TTAGAGAGGCCATTGAGCAAATCTGCTGTTGCAAACTCTTGGACCACTATATTTCCCAGA
GAGCTCATTAAGCTTATAGTTACTGGAGCAAAGAGTGGATTCAGGATGGTAGCTGCCAAG
CTTTGGAGGAAAGAGGACAGAAAGCCTTCCAAGTGGTCCAAATGCAAGGAGTCTGGCTCC
CTTCTTCCAACAAAACATAACAAGAGGATGCCAACCGAGGGTGCTCTGTCTCAATTCGTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400005689
PEP Infomation

pacid=37461101 transcript=PGSC0003DMT400008161 locus=PGSC0003DMG400003148 ID=PGSC0003DMT400008161.v4.03 annot-version=v4.03
Sequence

MLNLKLSHNPLIQYRPIRTSDLEVLEKIHGDLFPIRYESEFFQNVVNGRDIVSWGAVDRN
RPNEQSDELIGFVTARTVLAKDSDIEEFLRYDSSRSEQTLIYILTLGVADSYRNLGIASS
LIREVIKYASNIPICRAVYLHVISYNNPAIYLYKKMSFQCVRRLSAFYFINGQHYDAYLF
IYYVNGGRSPCSPFFQLEDLLERPLSKSAVANSWTTIFPRELIKLIVTGAKSGFRMVAAK
LWRKEDRKPSKWSKCKESGSLLPTKHNKRMPTEGALSQFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400008161
Transcript Infomation

pacid=37461101 locus=PGSC0003DMG400003148 ID=PGSC0003DMT400008161.v4.03 annot-version=v4.03
Sequence

ATGCTGAACCTCAAACTCTCTCACAATCCGCTCATACAATATAGGCCAATACGAACCTCT
GATTTAGAAGTACTTGAGAAAATCCATGGGGATCTGTTCCCGATCAGATATGAGTCTGAG
TTCTTCCAAAATGTTGTTAATGGACGGGACATTGTGTCATGGGGAGCTGTTGATCGTAAT
CGACCCAATGAGCAAAGTGACGAGCTTATTGGATTTGTGACTGCCCGGACTGTTCTAGCA
AAAGACAGTGACATAGAAGAATTTCTGAGGTATGACTCATCTAGATCAGAGCAAACACTG
ATTTACATCTTGACTCTGGGGGTTGCAGACTCTTATAGAAATCTTGGAATAGCCAGTTCT
CTAATTCGCGAGGTCATAAAATATGCCTCGAACATCCCGATTTGTCGAGCAGTTTACCTA
CATGTGATCTCATATAATAACCCTGCCATATACTTGTACAAGAAAATGTCCTTTCAGTGT
GTGAGGAGGCTGTCTGCCTTTTATTTTATTAATGGTCAGCATTACGATGCGTACTTGTTC
ATCTACTATGTGAATGGTGGTCGCTCTCCTTGCTCACCCTTTTTTCAGCTTGAGGATTTG
TTAGAGAGGCCATTGAGCAAATCTGCTGTTGCAAACTCTTGGACCACTATATTTCCCAGA
GAGCTCATTAAGCTTATAGTTACTGGAGCAAAGAGTGGATTCAGGATGGTAGCTGCCAAG
CTTTGGAGGAAAGAGGACAGAAAGCCTTCCAAGTGGTCCAAATGCAAGGAGTCTGGCTCC
CTTCTTCCAACAAAACATAACAAGAGGATGCCAACCGAGGGTGCTCTGTCTCAATTCGTT
TAA