Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008145
CDS Infomation

pacid=37458894 polypeptide=PGSC0003DMP400005674 locus=PGSC0003DMG400003143 ID=PGSC0003DMT400008145.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTCTGCAATCTTCATTCCTCTGCTCAACTCCATTAAAATCTCCATCTCACAAA
CCTACCAGAAAACCCAAACCGAGACCCACCATAGTCTCCTGCTCCGTCACACCAGACCCA
TGGACACTCAGCGATGGCAACAGCAAGAACCTCAACAAACCAAAACCCAGATCAAAGCAC
CCCAAGAATCCACTTTCCGACGACAACGCTCGTCGCATTATCAAAGCTAAAGCTCAATAT
TTAAGCGCGTTGAGGCGGAACCAAGGCTCACAAGCTATGACACCCAAATGGATTAAGCGG
ACCCCTGAGCAGATGGTGCAGTACTTGGAAGACGATAGAAATGGGAATTTGTACGGGAAG
CATGTGGTTGCGGCTATTAAGAGAGTAAGAAGTCTTTCGGTCAAAGCTGAAGGGTCATAT
GATATGAGGGAAGTGATGGGTTCTTTTGTTACGAAGCTTACTTTTAGAGAGATGTGTGTT
GTGCTCAAAGAACAAAGGGGTTGGCGACAAGTCAGAGATTTTTTCGCTTGGATGAAATTA
CAGTTAAGCTACCGGCCAAGTGTCATTATCTATACGATTATTCTCCGTACATATGGCCAA
GTTGGGAAAATCAAGCTAGCTGAGCAGACCTTTCTGGAAATGCTTGAAGCGGGGTGTGAA
CCTGATGAAGTTGCTTGTGGTACCATGTTGTGCGCTTATGCTCGGTGGGGACGTCACAAA
GCTATGATGTCCTTCTTTTCTGCTGTTCAGGAAAGGGGAATTACACCTTCAACTGCAGTC
TTTAATTTCATGCTGTCATCTTTACAGAAAAGATCACTTCATGAAAATGTTATAAGTATA
TGGAAACAGATGACTGAAAAAGGGGTTGAGCTGAATCATTTTACTTTTACAGTCGTTATC
TGCTCACTTGTCAAAGAAGGTCATGCTGAAGTAGCTTTTAAGACTTTAAATCAGATGAAG
AGTTTGAAGTTCATTCCGGAGGAGGCAACTTATAGCATTCTCATCAGTTTGATTTCAAAA
AGTGGTAACTATGATGATGCTTTCAGGCTTTATGAAGATATGAGATCACAAGGGATAATC
CCGAGCAACTTTACATGTGCTTCACTTTTGACAATGTATTACAGAAAGGAGGATTATCCC
AAAGCACTTGCTCTCTTTGAGGAGATGGAAAGGTATGGTATCAAAATAGATGAAGTCATA
TATGGCTTGCTTATCAGAATATATGGCAAGCTTGGTCTCTATGAAGATGCTCAAAAGACT
TTTGAAGACGTTAAGAAGTTGGGTGTGATTAGTAATGAGAAAACCTATACAACAATGGCT
CAAGTCCATCTAAATTTTGGAAACATTGAGGACGCACTGAATATAATGGATGAAATGAAG
TCAAAAAACATATCATTTTCAAATTTCTGTTATGGTATCTTATTGAGGTGCTATATTATG
AAGGAAGACTTGGCATCTGCCGAAGCTGTGTTTCAGGCTCTCTCTAAGATGCAAATTCCT
GAGTGTGGTTTTTGCAAAGACATGCTCAATTTGTACATGAGACTCGGTTTAACTGAGAAA
GCAAAAGATTTCATTTTCCAGATAAGGAAAATTCAAGTCGAATTTGATGAGGAGCTTCTC
AAGACAGTCATGAAAGTTTTTTGCATTGAAGGAATGGTCAGAGATGCAGTGCAGTTGATA
CGAGAGTTCAGTGCAAGCAAGACATTTGAAGATTCTGTATTTACACAGACTTTTTCTGTG
GCCATCCATGGAAATGATAGATTTTCTGCAACCGACATTGCTTCCAAGCCCTTGGACCAA
CCAGGTGCTATGGCTTTTGAGCTGGCCCTTATCCTCTATATAGCAGATGGAAATACAATG
AAGGCAGAAGAAACACTAAATTTGTTGCTTAAGACTGCAAATGGTCTGTCTGTTGCTAGT
CAGCTTATCAGGAAATTCACCAAAGAAGGTGACATTTCAAAGGCAGAAGACCTTTATAAG
CTGTTAATGAAGCTGGGTAGAAAACCAGAGGATGTTGCAAGTGCATCCTTGATCAATTTT
TATGGGAAGCAGAAGAATTTGAAGGAAGCGCTTAATGTCTTTGCATCAGTTGCGAACTCC
TCCAGTACTGGAAGTCTTATATACAATTCTATAATTGATTCATATAATAGATGTGACAAA
CAAGAGGAAGCTTACACGTTTTACAGGGAAGAGATGAAGAAAGGGCATGTTTTAGGTCCA
GTTGCTATTAGCATGCTGGTGAATGGTTTAAGTAATTGCGGGAGATATACTGAAGCGGAG
GCCATTATTCACAATTCTTTGCGTGCTAATTTAGAGCTTGATACTGTGGCTTATAATACA
TTTATCAAGGCAATGCTGCAAGCAGGTAAATTGCGGCTTGCATCCAGAGTTTATGAGCAC
ATGCTCTCCTCAGGTGTTCCTCCATCAATTCAAACATACAACACCATGATTAGTGTATAT
GGACGAGGAAGAAACCTAGATAAAGCTGTGAAGGCTTTTGATATTGCTCAGAAGATGGGC
ATTTCTTTGGATGAAAAGGCTTATACCAACTTGATATGTTATTATGGAAAGGCTGGGAAA
TATGATGAAGCATCTAATCTATTTGTCAGAATGCAGGAAGCAGGGATAAAACCTGGACAG
GTGAGCTGCAATGTTATGATCAATGTATATGCGGCTGCTGGACTTTATCAAGAAGCTGAA
GTCCTCATGCATAGCATGCGGAGCAGTGGTTGCAAACCTGACTCCCTAACCTATCTTGCA
CTGATTAGAGCATATACAAGGGTGGGAGAGTGCTCAGAGGCTGAAAAGGCCATTGATTCT
ATGCAGAAAGAAGGAATTCCCCCTTCTTGTGCTCATTTTAACGTGTTGCTATCAGGTTTT
GCAAAAGGGGGATTAATTAGAGAAGTAGAAAGGATTTATAATAATCTCATGAATGCTGAA
CTACAACCTGACCTAGAGTCTCATAGTCTTATGCTTAGATGTTACATGGACTATGGTCAT
GTGGTGGAAGGCATTTCCTTCTTTGAACGAATCTCCAAGTCTGTAAAACCTGACCGGTTT
ATAATGAGTGCAGCTGTGCATTTGTACAGGTCAGCAGGCTTAGTACTCAAAGCAGAAGGG
GTGTTGAGGTCTATGAACAGTTTCGGGATTCCCTTCTTGGAGAAACTTGAAGTTGGATCA
AAATTGAAAGCTGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005674
PEP Infomation

pacid=37458894 transcript=PGSC0003DMT400008145 locus=PGSC0003DMG400003143 ID=PGSC0003DMT400008145.v4.03 annot-version=v4.03
Sequence

MEALQSSFLCSTPLKSPSHKPTRKPKPRPTIVSCSVTPDPWTLSDGNSKNLNKPKPRSKH
PKNPLSDDNARRIIKAKAQYLSALRRNQGSQAMTPKWIKRTPEQMVQYLEDDRNGNLYGK
HVVAAIKRVRSLSVKAEGSYDMREVMGSFVTKLTFREMCVVLKEQRGWRQVRDFFAWMKL
QLSYRPSVIIYTIILRTYGQVGKIKLAEQTFLEMLEAGCEPDEVACGTMLCAYARWGRHK
AMMSFFSAVQERGITPSTAVFNFMLSSLQKRSLHENVISIWKQMTEKGVELNHFTFTVVI
CSLVKEGHAEVAFKTLNQMKSLKFIPEEATYSILISLISKSGNYDDAFRLYEDMRSQGII
PSNFTCASLLTMYYRKEDYPKALALFEEMERYGIKIDEVIYGLLIRIYGKLGLYEDAQKT
FEDVKKLGVISNEKTYTTMAQVHLNFGNIEDALNIMDEMKSKNISFSNFCYGILLRCYIM
KEDLASAEAVFQALSKMQIPECGFCKDMLNLYMRLGLTEKAKDFIFQIRKIQVEFDEELL
KTVMKVFCIEGMVRDAVQLIREFSASKTFEDSVFTQTFSVAIHGNDRFSATDIASKPLDQ
PGAMAFELALILYIADGNTMKAEETLNLLLKTANGLSVASQLIRKFTKEGDISKAEDLYK
LLMKLGRKPEDVASASLINFYGKQKNLKEALNVFASVANSSSTGSLIYNSIIDSYNRCDK
QEEAYTFYREEMKKGHVLGPVAISMLVNGLSNCGRYTEAEAIIHNSLRANLELDTVAYNT
FIKAMLQAGKLRLASRVYEHMLSSGVPPSIQTYNTMISVYGRGRNLDKAVKAFDIAQKMG
ISLDEKAYTNLICYYGKAGKYDEASNLFVRMQEAGIKPGQVSCNVMINVYAAAGLYQEAE
VLMHSMRSSGCKPDSLTYLALIRAYTRVGECSEAEKAIDSMQKEGIPPSCAHFNVLLSGF
AKGGLIREVERIYNNLMNAELQPDLESHSLMLRCYMDYGHVVEGISFFERISKSVKPDRF
IMSAAVHLYRSAGLVLKAEGVLRSMNSFGIPFLEKLEVGSKLKAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400008145
Transcript Infomation

pacid=37458894 locus=PGSC0003DMG400003143 ID=PGSC0003DMT400008145.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTCTGCAATCTTCATTCCTCTGCTCAACTCCATTAAAATCTCCATCTCACAAA
CCTACCAGAAAACCCAAACCGAGACCCACCATAGTCTCCTGCTCCGTCACACCAGACCCA
TGGACACTCAGCGATGGCAACAGCAAGAACCTCAACAAACCAAAACCCAGATCAAAGCAC
CCCAAGAATCCACTTTCCGACGACAACGCTCGTCGCATTATCAAAGCTAAAGCTCAATAT
TTAAGCGCGTTGAGGCGGAACCAAGGCTCACAAGCTATGACACCCAAATGGATTAAGCGG
ACCCCTGAGCAGATGGTGCAGTACTTGGAAGACGATAGAAATGGGAATTTGTACGGGAAG
CATGTGGTTGCGGCTATTAAGAGAGTAAGAAGTCTTTCGGTCAAAGCTGAAGGGTCATAT
GATATGAGGGAAGTGATGGGTTCTTTTGTTACGAAGCTTACTTTTAGAGAGATGTGTGTT
GTGCTCAAAGAACAAAGGGGTTGGCGACAAGTCAGAGATTTTTTCGCTTGGATGAAATTA
CAGTTAAGCTACCGGCCAAGTGTCATTATCTATACGATTATTCTCCGTACATATGGCCAA
GTTGGGAAAATCAAGCTAGCTGAGCAGACCTTTCTGGAAATGCTTGAAGCGGGGTGTGAA
CCTGATGAAGTTGCTTGTGGTACCATGTTGTGCGCTTATGCTCGGTGGGGACGTCACAAA
GCTATGATGTCCTTCTTTTCTGCTGTTCAGGAAAGGGGAATTACACCTTCAACTGCAGTC
TTTAATTTCATGCTGTCATCTTTACAGAAAAGATCACTTCATGAAAATGTTATAAGTATA
TGGAAACAGATGACTGAAAAAGGGGTTGAGCTGAATCATTTTACTTTTACAGTCGTTATC
TGCTCACTTGTCAAAGAAGGTCATGCTGAAGTAGCTTTTAAGACTTTAAATCAGATGAAG
AGTTTGAAGTTCATTCCGGAGGAGGCAACTTATAGCATTCTCATCAGTTTGATTTCAAAA
AGTGGTAACTATGATGATGCTTTCAGGCTTTATGAAGATATGAGATCACAAGGGATAATC
CCGAGCAACTTTACATGTGCTTCACTTTTGACAATGTATTACAGAAAGGAGGATTATCCC
AAAGCACTTGCTCTCTTTGAGGAGATGGAAAGGTATGGTATCAAAATAGATGAAGTCATA
TATGGCTTGCTTATCAGAATATATGGCAAGCTTGGTCTCTATGAAGATGCTCAAAAGACT
TTTGAAGACGTTAAGAAGTTGGGTGTGATTAGTAATGAGAAAACCTATACAACAATGGCT
CAAGTCCATCTAAATTTTGGAAACATTGAGGACGCACTGAATATAATGGATGAAATGAAG
TCAAAAAACATATCATTTTCAAATTTCTGTTATGGTATCTTATTGAGGTGCTATATTATG
AAGGAAGACTTGGCATCTGCCGAAGCTGTGTTTCAGGCTCTCTCTAAGATGCAAATTCCT
GAGTGTGGTTTTTGCAAAGACATGCTCAATTTGTACATGAGACTCGGTTTAACTGAGAAA
GCAAAAGATTTCATTTTCCAGATAAGGAAAATTCAAGTCGAATTTGATGAGGAGCTTCTC
AAGACAGTCATGAAAGTTTTTTGCATTGAAGGAATGGTCAGAGATGCAGTGCAGTTGATA
CGAGAGTTCAGTGCAAGCAAGACATTTGAAGATTCTGTATTTACACAGACTTTTTCTGTG
GCCATCCATGGAAATGATAGATTTTCTGCAACCGACATTGCTTCCAAGCCCTTGGACCAA
CCAGGTGCTATGGCTTTTGAGCTGGCCCTTATCCTCTATATAGCAGATGGAAATACAATG
AAGGCAGAAGAAACACTAAATTTGTTGCTTAAGACTGCAAATGGTCTGTCTGTTGCTAGT
CAGCTTATCAGGAAATTCACCAAAGAAGGTGACATTTCAAAGGCAGAAGACCTTTATAAG
CTGTTAATGAAGCTGGGTAGAAAACCAGAGGATGTTGCAAGTGCATCCTTGATCAATTTT
TATGGGAAGCAGAAGAATTTGAAGGAAGCGCTTAATGTCTTTGCATCAGTTGCGAACTCC
TCCAGTACTGGAAGTCTTATATACAATTCTATAATTGATTCATATAATAGATGTGACAAA
CAAGAGGAAGCTTACACGTTTTACAGGGAAGAGATGAAGAAAGGGCATGTTTTAGGTCCA
GTTGCTATTAGCATGCTGGTGAATGGTTTAAGTAATTGCGGGAGATATACTGAAGCGGAG
GCCATTATTCACAATTCTTTGCGTGCTAATTTAGAGCTTGATACTGTGGCTTATAATACA
TTTATCAAGGCAATGCTGCAAGCAGGTAAATTGCGGCTTGCATCCAGAGTTTATGAGCAC
ATGCTCTCCTCAGGTGTTCCTCCATCAATTCAAACATACAACACCATGATTAGTGTATAT
GGACGAGGAAGAAACCTAGATAAAGCTGTGAAGGCTTTTGATATTGCTCAGAAGATGGGC
ATTTCTTTGGATGAAAAGGCTTATACCAACTTGATATGTTATTATGGAAAGGCTGGGAAA
TATGATGAAGCATCTAATCTATTTGTCAGAATGCAGGAAGCAGGGATAAAACCTGGACAG
GTGAGCTGCAATGTTATGATCAATGTATATGCGGCTGCTGGACTTTATCAAGAAGCTGAA
GTCCTCATGCATAGCATGCGGAGCAGTGGTTGCAAACCTGACTCCCTAACCTATCTTGCA
CTGATTAGAGCATATACAAGGGTGGGAGAGTGCTCAGAGGCTGAAAAGGCCATTGATTCT
ATGCAGAAAGAAGGAATTCCCCCTTCTTGTGCTCATTTTAACGTGTTGCTATCAGGTTTT
GCAAAAGGGGGATTAATTAGAGAAGTAGAAAGGATTTATAATAATCTCATGAATGCTGAA
CTACAACCTGACCTAGAGTCTCATAGTCTTATGCTTAGATGTTACATGGACTATGGTCAT
GTGGTGGAAGGCATTTCCTTCTTTGAACGAATCTCCAAGTCTGTAAAACCTGACCGGTTT
ATAATGAGTGCAGCTGTGCATTTGTACAGGTCAGCAGGCTTAGTACTCAAAGCAGAAGGG
GTGTTGAGGTCTATGAACAGTTTCGGGATTCCCTTCTTGGAGAAACTTGAAGTTGGATCA
AAATTGAAAGCTGACTGA