Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008141
CDS Infomation

pacid=37459144 polypeptide=PGSC0003DMP400005670 locus=PGSC0003DMG401003142 ID=PGSC0003DMT400008141.v4.03 annot-version=v4.03
Sequence

ATGGAAATCTGGTTTATCATTGTTGTTACTCTCTGTATTGCTTTCTGGTTGAAATCCATT
TTTAATATTATTGTCTCTCCAAATTCCAATACCAAGAAGAAGCTCCCGCCGGGACCCTAC
AATTTTCCGGTGATCGGTAGCTTATTATGGGCCAAAAGGACCTTCGCCGACTTGGAACCC
ATCCTCCGTGACCTTAAGGCTAAGTATGGTCCGCTGATTACCCTAAAGATTGGGTCTCGT
TCAGCCATATTCGTAGCTATCCACTCCATAGACTACCAAGCTTTAGTCCAGCAAGGTGCT
GTTTTCTCTGACCGGCCAAAGGCTGGACCCGTCAGTAGTAACCAGCGGAACATCAGCTCC
TCCCCTTACGGCCCTATATGGCGTCTACTCCGTCGAAATTTGACTTCAGAAATACTCCAC
CCTTCTCGCATCAAGTCCTATTCCAAGGCCAGATCTTGGGTATTGGGTATCCTCATTCAA
CAGCTCCGTAACTCCCAAGTTGATTCTGTTAAGTTAATTGATCATTTTCAGTATGCTATG
TTCTGTCTTCTTGTATTGATGTGTTTTGGGGATAAGCTTGAGGAATCTCAAATCAGACAA
ATTGAAAATATACAGCGCAAAATGCTCCTGGGTTTCAGACGATTCAATATGCTCAATTTC
TTTCCTAGAGTTGGGAAAATAATTTTTAGGAATCGCTGGAAGGAACTCATTGAACTACGA
CAAGAGCAAGAGAGTATCATTATCCCTCTGATTGAAGCTCGAAGCAGGACCAAAGAACAA
AAAATCGAGCACGGTGATGAATTTGTGGTGGCTTATGTGGATACGCTGTTGAATTTGGAG
TTGCCAGAGGAAAAAAGGAACCTCAATCATGGAGAAATCGTAACCCTCTGCAGTGAATTC
CTAAGCGCCGGAACTGATACGACGTCCACTGCCTTACAGTGGGTTATGGCCAACTTGGTC
AAAAACCCTTCCATTCAGGAAAAACTGTACCAAGAAATTGCAAGAGTAGTGGGAGAAAAA
CAGAGCAAGTTGGCAGATGAAGAGGTGGTGAAGGAGGAAGATTTGCAGAAAATACCCTAC
TTGAAAGCAGTGATATTAGAAGGTCTTAGGCGGCACCCACCTGGTCACTTTGTGCTGCCA
CACACAGTGACGGAGGAAGTAGAACTGAACGGCTACGTCATCCCAAAGGATGTCACGATC
AATTTCATGGTTGCAGAGATGGGTCTAGACCCGAAGGTGTGGGAGGATCCCTTGGAGTTC
AGGCCAGAGAGGTTCTTAGTGGAAGGATCAGATAACGAAGGGTTTGATATAACAGGGAGT
AGAGAGATCAAGATGATGCCATTCGGCGCAGGGAGGAGAATATGTCCTGCCTATGCATTG
GCTATGCTTCATTTGGAATACTTTGTGGCTAATTTGGTTTGGCATTTTCAATGGAAGCCT
GTGGAAGGAGATGATGTTGATCTCACAGAGATTCTAGAATTCACCGTTGTGATGAAGAAC
CCACTACGAGCTCGTATCTGCCCCAGAGTTAACTCTGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400005670
PEP Infomation

pacid=37459144 transcript=PGSC0003DMT400008141 locus=PGSC0003DMG401003142 ID=PGSC0003DMT400008141.v4.03 annot-version=v4.03
Sequence

MEIWFIIVVTLCIAFWLKSIFNIIVSPNSNTKKKLPPGPYNFPVIGSLLWAKRTFADLEP
ILRDLKAKYGPLITLKIGSRSAIFVAIHSIDYQALVQQGAVFSDRPKAGPVSSNQRNISS
SPYGPIWRLLRRNLTSEILHPSRIKSYSKARSWVLGILIQQLRNSQVDSVKLIDHFQYAM
FCLLVLMCFGDKLEESQIRQIENIQRKMLLGFRRFNMLNFFPRVGKIIFRNRWKELIELR
QEQESIIIPLIEARSRTKEQKIEHGDEFVVAYVDTLLNLELPEEKRNLNHGEIVTLCSEF
LSAGTDTTSTALQWVMANLVKNPSIQEKLYQEIARVVGEKQSKLADEEVVKEEDLQKIPY
LKAVILEGLRRHPPGHFVLPHTVTEEVELNGYVIPKDVTINFMVAEMGLDPKVWEDPLEF
RPERFLVEGSDNEGFDITGSREIKMMPFGAGRRICPAYALAMLHLEYFVANLVWHFQWKP
VEGDDVDLTEILEFTVVMKNPLRARICPRVNSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400008141
Transcript Infomation

pacid=37459144 locus=PGSC0003DMG401003142 ID=PGSC0003DMT400008141.v4.03 annot-version=v4.03
Sequence

ATGGAAATCTGGTTTATCATTGTTGTTACTCTCTGTATTGCTTTCTGGTTGAAATCCATT
TTTAATATTATTGTCTCTCCAAATTCCAATACCAAGAAGAAGCTCCCGCCGGGACCCTAC
AATTTTCCGGTGATCGGTAGCTTATTATGGGCCAAAAGGACCTTCGCCGACTTGGAACCC
ATCCTCCGTGACCTTAAGGCTAAGTATGGTCCGCTGATTACCCTAAAGATTGGGTCTCGT
TCAGCCATATTCGTAGCTATCCACTCCATAGACTACCAAGCTTTAGTCCAGCAAGGTGCT
GTTTTCTCTGACCGGCCAAAGGCTGGACCCGTCAGTAGTAACCAGCGGAACATCAGCTCC
TCCCCTTACGGCCCTATATGGCGTCTACTCCGTCGAAATTTGACTTCAGAAATACTCCAC
CCTTCTCGCATCAAGTCCTATTCCAAGGCCAGATCTTGGGTATTGGGTATCCTCATTCAA
CAGCTCCGTAACTCCCAAGTTGATTCTGTTAAGTTAATTGATCATTTTCAGTATGCTATG
TTCTGTCTTCTTGTATTGATGTGTTTTGGGGATAAGCTTGAGGAATCTCAAATCAGACAA
ATTGAAAATATACAGCGCAAAATGCTCCTGGGTTTCAGACGATTCAATATGCTCAATTTC
TTTCCTAGAGTTGGGAAAATAATTTTTAGGAATCGCTGGAAGGAACTCATTGAACTACGA
CAAGAGCAAGAGAGTATCATTATCCCTCTGATTGAAGCTCGAAGCAGGACCAAAGAACAA
AAAATCGAGCACGGTGATGAATTTGTGGTGGCTTATGTGGATACGCTGTTGAATTTGGAG
TTGCCAGAGGAAAAAAGGAACCTCAATCATGGAGAAATCGTAACCCTCTGCAGTGAATTC
CTAAGCGCCGGAACTGATACGACGTCCACTGCCTTACAGTGGGTTATGGCCAACTTGGTC
AAAAACCCTTCCATTCAGGAAAAACTGTACCAAGAAATTGCAAGAGTAGTGGGAGAAAAA
CAGAGCAAGTTGGCAGATGAAGAGGTGGTGAAGGAGGAAGATTTGCAGAAAATACCCTAC
TTGAAAGCAGTGATATTAGAAGGTCTTAGGCGGCACCCACCTGGTCACTTTGTGCTGCCA
CACACAGTGACGGAGGAAGTAGAACTGAACGGCTACGTCATCCCAAAGGATGTCACGATC
AATTTCATGGTTGCAGAGATGGGTCTAGACCCGAAGGTGTGGGAGGATCCCTTGGAGTTC
AGGCCAGAGAGGTTCTTAGTGGAAGGATCAGATAACGAAGGGTTTGATATAACAGGGAGT
AGAGAGATCAAGATGATGCCATTCGGCGCAGGGAGGAGAATATGTCCTGCCTATGCATTG
GCTATGCTTCATTTGGAATACTTTGTGGCTAATTTGGTTTGGCATTTTCAATGGAAGCCT
GTGGAAGGAGATGATGTTGATCTCACAGAGATTCTAGAATTCACCGTTGTGATGAAGAAC
CCACTACGAGCTCGTATCTGCCCCAGAGTTAACTCTGTTTGA