Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400008133
CDS Infomation

pacid=37433643 polypeptide=PGSC0003DMP400005664 locus=PGSC0003DMG400003138 ID=PGSC0003DMT400008133.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAATGGTTTCAATTGCAACTACCATTGTATCAGTTACTCCAGGAGCTGTCCTT
CTCACAAGAAGGAATCAATGTTTATCAAAATACAATGTTTCACGAAAATCCAGCAAGCAG
ACTTTACCTACCCCAAAATATATCCTGCCTCTGTCAACATCTATTAAATTGTTTCCCCAT
TTTAGAGTTGGTTGCATTTTACGACCTAAATTAAGAGGTCTTGTAGTATCAGCAACTGAG
ACTGATGTAGCAGTGGAAGAAGTAGAAGCAACTGCTACAGATGATGGATCAGGTGAAGTC
TCAGAAGCTTCATCTGATGCTGCTGAAACAAGTCAAGAATCCTCCATATCAGATGTGAGT
CCTACATCTGTTCAATCTAAGCGTTCAAGACCTGCTAGAAAGAGTGAGATGCCTCCTGTG
AAGAATGAAAACCTTATTCCAGGTGCAACTTTTACTGGAAAGGTCAGATCGATACAGCCA
TTTGGTGCTTTTATTGATTTTGGAGCTTTTACGGATGGACTGGTGCATGTTTCTAGGTTG
AGTGATAGTTTTGTAAAGGATGTAGGAAGCATTGTATCTGTTGGACAAGAGGTTACAGTG
AGATTAGTTGAAGCAAACACTGAGACAGGGCGCATATCTCTCACCATGCGTGAAAGTGAT
GATCCTAGTAGGCCACAGCAACAGAAAGATACTCCAACCAGTAGCGACAGACCCCGAACT
CAAAGGAAGAGCACACAAAGGAACAACCAAAGGAGAGATGAGAAAGTCTCAAAGTTTGTC
AAGGGGCAAGATCTTGAGGGCACTGTAAAAAATCTAACCAGGTCTGGTGCTTTTATATCT
CTTCCTGAGGGAGAGGAAGGATTCCTGCCAGCATCAGAGGAAACTGATGAAGTGTTTGGA
ATTATTGACAGTGGCTCTTCACTACAAGTAGGCCAAGAAGTTAATGTCCGTGTATTGCGC
ATTGCCAGAGGACAAGTAACTTTGACCATGAAAAAAGAAGAAGCTGCTTCAGAGTTGGAC
TCAAAGCTCAACCAGGGTGTTGTCCATTCGGCGACAAACCCCTTTTTATTGGCTTTCCGT
AGCAACAAAGAGATCTCTTCATTTTTGGATGAGAGGGAAAAAGAAGACGAACTAGCTGAA
CAATCAAAGGAAGATGCACAGGAATCAGATGTGGCGACTAATAAAATGGATGTGTTGCCT
GAAACTACTAGCAAAGAGGAAGAATCAGTCAATGCTGCAAATGATGGTGTTCCAGAAACT
ATAAATGGGGAGGATACGAAACAAAACGTTGATGAAGAAGTGGAGTCAGCTCCTGAAGGA
AGCACATCCACGATTGGTCAGCAAGCTGAGGTGTCACCTGTAGGAGATGCTGAGGAAACT
GAAGCTGAAACTGGCTCATATGAGCAAGCAGCTGATCAGATCTCAGCATCTGAAACTGTG
GTGGGCGAGGAGGTCGTGGAGAAACTAACTGATGATAATATAGTGGAAAATGAGGTTGCA
ACTGAAATACCAAGTGTCATAGAGGCTGTCAAAGAAACAGAGGAAACCAGTGCCGATGAG
AATGATAGTATATCAAGCCCAACTGGGCAATCTGAAGCTCCTTTGGAGAATAGCAAGGAT
GAAGAAAGTCAGGAAGGTGCTGGAGTTTTAGACACTCAAGTTGAAAGTGCTCCTTCCATA
GGGGAACAGTCATCTGATACTGCTGCTCAACAGGAAGAGGGTTCTCCCAATACTGATCAA
GATATTGTGAACTCAAGTGAACAAAATGGGACTGCTTCATCAAATGAAGCCGCAGCAAAA
GCTATTTCACCTGTTCTTGTGAAACAATTGCGTGAAGAGACAGGAGCAGGAATGATGGAC
TGCAAGAAGGCTCTTACAGAAACTGCAGGTGACATTGTTAAAGCGCAGGAGTATCTCAGG
AAAAAGGGGTTGGCAAGTGCTGATAAGAAATCAAGTAGAGCTACAGCTGAAGGCAGAATT
GGATCATACATCCATGATAGCAGAATCGGTGTCCTGGTAGAGGTTAACTGTGAAACAGAT
TTTGTATCGCGTGGTGACATTTTCAAGGAATTAGTTGATGACTTGGCCATGCAAGTGGCT
GCATACCCTCAAGTGCAGTATCTTGTTCCAGAAGATGTGCCAGCGGAGATCATCAACAAG
GAAAGAGAAATCGAAATGCAGAAGGAAGACCTATTATCAAAACCTGAGCAGATCAGATCC
AAGATCGTTGATGGGCGGATAAATAAGAGGCTTGAAGATCTGGCATTACTGGAGCAGCCT
TACATCAAGAATGATAAGATGATCGTAAAGGACTTGATCAAGCAGACAATTTCAACGATT
GGTGAAAACATCAAAGTGAAGAGATTTGTGAGATACAACCTGGGAGAAGGTCTTGAAAAG
AAGAGCCAAGACTTTGCTGCAGAGGTGGCTGCTCAAACAGCAGCTAAACCTGTCTCCTCG
CCAGGAAAAGAGCAACCAGCTGTTGAAGCCAAGGAGACTACTGTTGAGCCTCCGAAAGCA
GCAGTTTCAGCCACTTTGGTTAAACAGCTGCGAGAAGAAACTGGCGCTGGGATGATGGAT
TGCAAGAAAGCCCTCTCTGAAACTGGAGGGGATCTTGAGAAGGCACAGGAATACCTCCGA
AAGAAGGGTCTTTCAACTGCCGATAAAAAGTCTAGCCGACTTGCTGCTGAGGGGAGAATT
GGTTCGTACATTCATGACTCTCGCATTGGAGTGCTAATTGAAGTTAATTGTGAAACCGAC
TTTGTCGGGAGAGGTGAAACATTTAAGGAGTTGGTCGATGATTTGGCAATGCAAGTTGCA
GCCTGCCCACAGGTGCAATATGTATCTATCGATGAGATTCCAGAAAGCGCTGTAAACAAG
GAAAAAGAGTTGGAAATGCAGAGAGAAGACCTTAAGAACAAGCCTGAAAATATAAGGGAG
AAGATTGTTGAGGGCAGGGTCTCCAAGAGACTTGGAGAGCTTGTTCTTTTGGAGCAGCCT
TTCATAAAAGATGATAGTGTTCTTGTGAAGGATTTGGTAAAGCAAACTGTTGCTGCTCTT
GGGGAGAACATAAAAGTTAGGAGGTTTGTTCGATTTACTCTAGGTGAGGAAGCCAAAAAA
GAAGGAATAATTGAGGAGCCAGTTGCTGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400005664
PEP Infomation

pacid=37433643 transcript=PGSC0003DMT400008133 locus=PGSC0003DMG400003138 ID=PGSC0003DMT400008133.v4.03 annot-version=v4.03
Sequence

MAPMVSIATTIVSVTPGAVLLTRRNQCLSKYNVSRKSSKQTLPTPKYILPLSTSIKLFPH
FRVGCILRPKLRGLVVSATETDVAVEEVEATATDDGSGEVSEASSDAAETSQESSISDVS
PTSVQSKRSRPARKSEMPPVKNENLIPGATFTGKVRSIQPFGAFIDFGAFTDGLVHVSRL
SDSFVKDVGSIVSVGQEVTVRLVEANTETGRISLTMRESDDPSRPQQQKDTPTSSDRPRT
QRKSTQRNNQRRDEKVSKFVKGQDLEGTVKNLTRSGAFISLPEGEEGFLPASEETDEVFG
IIDSGSSLQVGQEVNVRVLRIARGQVTLTMKKEEAASELDSKLNQGVVHSATNPFLLAFR
SNKEISSFLDEREKEDELAEQSKEDAQESDVATNKMDVLPETTSKEEESVNAANDGVPET
INGEDTKQNVDEEVESAPEGSTSTIGQQAEVSPVGDAEETEAETGSYEQAADQISASETV
VGEEVVEKLTDDNIVENEVATEIPSVIEAVKETEETSADENDSISSPTGQSEAPLENSKD
EESQEGAGVLDTQVESAPSIGEQSSDTAAQQEEGSPNTDQDIVNSSEQNGTASSNEAAAK
AISPVLVKQLREETGAGMMDCKKALTETAGDIVKAQEYLRKKGLASADKKSSRATAEGRI
GSYIHDSRIGVLVEVNCETDFVSRGDIFKELVDDLAMQVAAYPQVQYLVPEDVPAEIINK
EREIEMQKEDLLSKPEQIRSKIVDGRINKRLEDLALLEQPYIKNDKMIVKDLIKQTISTI
GENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAAKPVSSPGKEQPAVEAKETTVEPPKA
AVSATLVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGRI
GSYIHDSRIGVLIEVNCETDFVGRGETFKELVDDLAMQVAACPQVQYVSIDEIPESAVNK
EKELEMQREDLKNKPENIREKIVEGRVSKRLGELVLLEQPFIKDDSVLVKDLVKQTVAAL
GENIKVRRFVRFTLGEEAKKEGIIEEPVAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400008133
Transcript Infomation

pacid=37433643 locus=PGSC0003DMG400003138 ID=PGSC0003DMT400008133.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAATGGTTTCAATTGCAACTACCATTGTATCAGTTACTCCAGGAGCTGTCCTT
CTCACAAGAAGGAATCAATGTTTATCAAAATACAATGTTTCACGAAAATCCAGCAAGCAG
ACTTTACCTACCCCAAAATATATCCTGCCTCTGTCAACATCTATTAAATTGTTTCCCCAT
TTTAGAGTTGGTTGCATTTTACGACCTAAATTAAGAGGTCTTGTAGTATCAGCAACTGAG
ACTGATGTAGCAGTGGAAGAAGTAGAAGCAACTGCTACAGATGATGGATCAGGTGAAGTC
TCAGAAGCTTCATCTGATGCTGCTGAAACAAGTCAAGAATCCTCCATATCAGATGTGAGT
CCTACATCTGTTCAATCTAAGCGTTCAAGACCTGCTAGAAAGAGTGAGATGCCTCCTGTG
AAGAATGAAAACCTTATTCCAGGTGCAACTTTTACTGGAAAGGTCAGATCGATACAGCCA
TTTGGTGCTTTTATTGATTTTGGAGCTTTTACGGATGGACTGGTGCATGTTTCTAGGTTG
AGTGATAGTTTTGTAAAGGATGTAGGAAGCATTGTATCTGTTGGACAAGAGGTTACAGTG
AGATTAGTTGAAGCAAACACTGAGACAGGGCGCATATCTCTCACCATGCGTGAAAGTGAT
GATCCTAGTAGGCCACAGCAACAGAAAGATACTCCAACCAGTAGCGACAGACCCCGAACT
CAAAGGAAGAGCACACAAAGGAACAACCAAAGGAGAGATGAGAAAGTCTCAAAGTTTGTC
AAGGGGCAAGATCTTGAGGGCACTGTAAAAAATCTAACCAGGTCTGGTGCTTTTATATCT
CTTCCTGAGGGAGAGGAAGGATTCCTGCCAGCATCAGAGGAAACTGATGAAGTGTTTGGA
ATTATTGACAGTGGCTCTTCACTACAAGTAGGCCAAGAAGTTAATGTCCGTGTATTGCGC
ATTGCCAGAGGACAAGTAACTTTGACCATGAAAAAAGAAGAAGCTGCTTCAGAGTTGGAC
TCAAAGCTCAACCAGGGTGTTGTCCATTCGGCGACAAACCCCTTTTTATTGGCTTTCCGT
AGCAACAAAGAGATCTCTTCATTTTTGGATGAGAGGGAAAAAGAAGACGAACTAGCTGAA
CAATCAAAGGAAGATGCACAGGAATCAGATGTGGCGACTAATAAAATGGATGTGTTGCCT
GAAACTACTAGCAAAGAGGAAGAATCAGTCAATGCTGCAAATGATGGTGTTCCAGAAACT
ATAAATGGGGAGGATACGAAACAAAACGTTGATGAAGAAGTGGAGTCAGCTCCTGAAGGA
AGCACATCCACGATTGGTCAGCAAGCTGAGGTGTCACCTGTAGGAGATGCTGAGGAAACT
GAAGCTGAAACTGGCTCATATGAGCAAGCAGCTGATCAGATCTCAGCATCTGAAACTGTG
GTGGGCGAGGAGGTCGTGGAGAAACTAACTGATGATAATATAGTGGAAAATGAGGTTGCA
ACTGAAATACCAAGTGTCATAGAGGCTGTCAAAGAAACAGAGGAAACCAGTGCCGATGAG
AATGATAGTATATCAAGCCCAACTGGGCAATCTGAAGCTCCTTTGGAGAATAGCAAGGAT
GAAGAAAGTCAGGAAGGTGCTGGAGTTTTAGACACTCAAGTTGAAAGTGCTCCTTCCATA
GGGGAACAGTCATCTGATACTGCTGCTCAACAGGAAGAGGGTTCTCCCAATACTGATCAA
GATATTGTGAACTCAAGTGAACAAAATGGGACTGCTTCATCAAATGAAGCCGCAGCAAAA
GCTATTTCACCTGTTCTTGTGAAACAATTGCGTGAAGAGACAGGAGCAGGAATGATGGAC
TGCAAGAAGGCTCTTACAGAAACTGCAGGTGACATTGTTAAAGCGCAGGAGTATCTCAGG
AAAAAGGGGTTGGCAAGTGCTGATAAGAAATCAAGTAGAGCTACAGCTGAAGGCAGAATT
GGATCATACATCCATGATAGCAGAATCGGTGTCCTGGTAGAGGTTAACTGTGAAACAGAT
TTTGTATCGCGTGGTGACATTTTCAAGGAATTAGTTGATGACTTGGCCATGCAAGTGGCT
GCATACCCTCAAGTGCAGTATCTTGTTCCAGAAGATGTGCCAGCGGAGATCATCAACAAG
GAAAGAGAAATCGAAATGCAGAAGGAAGACCTATTATCAAAACCTGAGCAGATCAGATCC
AAGATCGTTGATGGGCGGATAAATAAGAGGCTTGAAGATCTGGCATTACTGGAGCAGCCT
TACATCAAGAATGATAAGATGATCGTAAAGGACTTGATCAAGCAGACAATTTCAACGATT
GGTGAAAACATCAAAGTGAAGAGATTTGTGAGATACAACCTGGGAGAAGGTCTTGAAAAG
AAGAGCCAAGACTTTGCTGCAGAGGTGGCTGCTCAAACAGCAGCTAAACCTGTCTCCTCG
CCAGGAAAAGAGCAACCAGCTGTTGAAGCCAAGGAGACTACTGTTGAGCCTCCGAAAGCA
GCAGTTTCAGCCACTTTGGTTAAACAGCTGCGAGAAGAAACTGGCGCTGGGATGATGGAT
TGCAAGAAAGCCCTCTCTGAAACTGGAGGGGATCTTGAGAAGGCACAGGAATACCTCCGA
AAGAAGGGTCTTTCAACTGCCGATAAAAAGTCTAGCCGACTTGCTGCTGAGGGGAGAATT
GGTTCGTACATTCATGACTCTCGCATTGGAGTGCTAATTGAAGTTAATTGTGAAACCGAC
TTTGTCGGGAGAGGTGAAACATTTAAGGAGTTGGTCGATGATTTGGCAATGCAAGTTGCA
GCCTGCCCACAGGTGCAATATGTATCTATCGATGAGATTCCAGAAAGCGCTGTAAACAAG
GAAAAAGAGTTGGAAATGCAGAGAGAAGACCTTAAGAACAAGCCTGAAAATATAAGGGAG
AAGATTGTTGAGGGCAGGGTCTCCAAGAGACTTGGAGAGCTTGTTCTTTTGGAGCAGCCT
TTCATAAAAGATGATAGTGTTCTTGTGAAGGATTTGGTAAAGCAAACTGTTGCTGCTCTT
GGGGAGAACATAAAAGTTAGGAGGTTTGTTCGATTTACTCTAGGTGAGGAAGCCAAAAAA
GAAGGAATAATTGAGGAGCCAGTTGCTGTATGA